RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 H0Y980 276 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 TIMM8AO60220 97 aaPredicted RBP10.53□□□□□ -0.72
PRPF6-201ENST00000266079 YPEL1O60688 119 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 IGKV1-13P0DP09 117 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 IL3RAP26951 378 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 GCH1P30793 250 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 HOXA4Q00056 320 aaPredicted RBP10.53□□□□□ -0.72
PRPF6-201ENST00000266079 OR5I1Q13606 314 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 TOMM20LQ6UXN7 152 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 TEX43Q6ZNM6 134 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 YPEL2Q96QA6 119 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 CCL28Q9NRJ3 127 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 TMEM106BQ9NUM4 274 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 TRAPPC1Q9Y5R8 145 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 A0A1B0GUS0 222 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 A1L4Q6 167 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 GPM6AP51674 278 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 TFF3Q07654 80 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 TESK1Q15569 626 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 CST9LP1Q5W188 147 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 ZCCHC24Q8N2G6 241 aaKnown RBP10.53□□□□□ -0.72
PRPF6-201ENST00000266079 SPSB4Q96A44 273 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 HS3ST6Q96QI5 342 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 CSMD2Q7Z408 3487 aa10.53□□□□□ -0.72
PRPF6-201ENST00000266079 ZNF816-ZNF321PA0A0X1KG74 233 aa10.52□□□□□ -0.72
PRPF6-201ENST00000266079 SIAH2O43255 324 aa10.52□□□□□ -0.72
PRPF6-201ENST00000266079 SLC25A6P12236 298 aa10.52□□□□□ -0.72
PRPF6-201ENST00000266079 RANP62826 216 aaKnown RBP10.52□□□□□ -0.72
PRPF6-201ENST00000266079 Q6ZS49 121 aa10.52□□□□□ -0.72
PRPF6-201ENST00000266079 NEK7Q8TDX7 302 aa10.52□□□□□ -0.72
PRPF6-201ENST00000266079 WDR61Q9GZS3 305 aaKnown RBP10.52□□□□□ -0.72
PRPF6-201ENST00000266079 RIMS4Q9H426 269 aaPredicted RBP10.52□□□□□ -0.72
PRPF6-201ENST00000266079 PXMP4Q9Y6I8 212 aa10.52□□□□□ -0.72
PRPF6-201ENST00000266079 VENTXO95231 258 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 RBM11P57052 281 aaKnown RBP10.52□□□□□ -0.73
PRPF6-201ENST00000266079 BATFQ16520 125 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 TDRG1Q3Y452 100 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 FAM78BQ5VT40 261 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 HAPLN4Q86UW8 402 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 RPP25LQ8N5L8 163 aaKnown RBP10.52□□□□□ -0.73
PRPF6-201ENST00000266079 MANBALQ9NQG1 85 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 ZFP30Q9Y2G7 519 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 A0A0U1RQK1 487 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 ZNF320A2RRD8 509 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 ANKRD30BLA7E2S9 258 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 TCF21O43680 179 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 TUSC2O75896 110 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 OR7C1O76099 320 aaPredicted RBP10.52□□□□□ -0.73
PRPF6-201ENST00000266079 HBG1P69891 147 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 HBG2P69892 147 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 ZNF718Q3SXZ3 478 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 COL5A1-AS1Q5SY13 56 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 OR4F5Q8NH21 305 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 BTF3L4Q96K17 158 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 OR4F4Q96R69 305 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 PARD6GQ9BYG4 376 aaPredicted RBP10.52□□□□□ -0.73
PRPF6-201ENST00000266079 PSENENQ9NZ42 101 aa10.52□□□□□ -0.73
PRPF6-201ENST00000266079 YLPM1P49750 1951 aaKnown RBP10.51□□□□□ -0.73
PRPF6-201ENST00000266079 PGLYRP1O75594 196 aaPredicted RBP10.51□□□□□ -0.73
PRPF6-201ENST00000266079 IGKV1D-33P01593 117 aa10.51□□□□□ -0.73
PRPF6-201ENST00000266079 IGKV1-33P01594 117 aa10.51□□□□□ -0.73
PRPF6-201ENST00000266079 SCTP09683 121 aa10.51□□□□□ -0.73
PRPF6-201ENST00000266079 IAPPP10997 89 aa10.51□□□□□ -0.73
PRPF6-201ENST00000266079 TPTE2P1Q5T6R2 138 aa10.51□□□□□ -0.73
PRPF6-201ENST00000266079 CMTM2Q8TAZ6 248 aa10.51□□□□□ -0.73
PRPF6-201ENST00000266079 OR4C12Q96R67 309 aa10.51□□□□□ -0.73
PRPF6-201ENST00000266079 FGF23Q9GZV9 251 aaPredicted RBP10.51□□□□□ -0.73
PRPF6-201ENST00000266079 SYNGR2O43760 224 aa10.51□□□□□ -0.73
PRPF6-201ENST00000266079 CHRNA7P36544 502 aa10.51□□□□□ -0.73
PRPF6-201ENST00000266079 TMEM183BQ1AE95 376 aa10.51□□□□□ -0.73
PRPF6-201ENST00000266079 FBXL19-AS1Q494R0 122 aa10.51□□□□□ -0.73
PRPF6-201ENST00000266079 CALHM1Q8IU99 346 aa10.51□□□□□ -0.73
PRPF6-201ENST00000266079 ZNF808Q8N4W9 903 aaPredicted RBP10.51□□□□□ -0.73
PRPF6-201ENST00000266079 DNAJC4Q9NNZ3 241 aa10.51□□□□□ -0.73
PRPF6-201ENST00000266079 CD33P20138 364 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 F2RP25116 425 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 DAZAP2Q15038 168 aaPredicted RBP10.5□□□□□ -0.73
PRPF6-201ENST00000266079 Q6ZWC4 215 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 TMEM144Q7Z5S9 345 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 TAF15Q92804 592 aaKnown RBP eCLIP10.5□□□□□ -0.73
PRPF6-201ENST00000266079 ZNF391Q9UJN7 358 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 MED13LQ71F56 2210 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 GRPP07492 148 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 PAFAH1B2P68402 229 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 IZUMO4Q1ZYL8 232 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 TMEM42Q69YG0 159 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 Q6ZRM9 215 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 ZDHHC23Q8IYP9 409 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 C11orf42Q8N5U0 333 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 NGBQ9NPG2 151 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 SPRY3O43610 288 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 RAC2P15153 192 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 TFPI2P48307 235 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 RAB7AP51149 207 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 FUT6P51993 359 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 SRSF7Q16629 238 aaKnown RBP eCLIP10.5□□□□□ -0.735e-7■■■■■ 34.6
PRPF6-201ENST00000266079 FAM169BQ8N8A8 192 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 OR5T1Q8NG75 326 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 GATAD1Q8WUU5 269 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 NEIL1Q96FI4 390 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms