RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 MPPED1O15442 326 aa5.67□□□□□ -1.5
DEPDC1B-201ENST00000265036 TPPPO94811 219 aa5.67□□□□□ -1.5
DEPDC1B-201ENST00000265036 IGHV3-11P01762 117 aa5.67□□□□□ -1.5
DEPDC1B-201ENST00000265036 IGF1P05019 195 aa5.67□□□□□ -1.5
DEPDC1B-201ENST00000265036 REG1AP05451 166 aa5.67□□□□□ -1.5
DEPDC1B-201ENST00000265036 CRYGBP07316 175 aa5.67□□□□□ -1.5
DEPDC1B-201ENST00000265036 ETV6P41212 452 aa5.67□□□□□ -1.5
DEPDC1B-201ENST00000265036 LPAR6P43657 344 aa5.67□□□□□ -1.5
DEPDC1B-201ENST00000265036 CFHR3Q02985 330 aa5.67□□□□□ -1.5
DEPDC1B-201ENST00000265036 SSBP1Q04837 148 aaKnown RBP5.67□□□□□ -1.5
DEPDC1B-201ENST00000265036 ZNF585BQ52M93 769 aa5.67□□□□□ -1.5
DEPDC1B-201ENST00000265036 TEX38Q6PEX7 206 aa5.67□□□□□ -1.5
DEPDC1B-201ENST00000265036 TMED4Q7Z7H5 227 aa5.67□□□□□ -1.5
DEPDC1B-201ENST00000265036 ZBTB34Q8NCN2 500 aa5.67□□□□□ -1.5
DEPDC1B-201ENST00000265036 FYTTD1Q96QD9 318 aaKnown RBP5.67□□□□□ -1.5
DEPDC1B-201ENST00000265036 COPZ2Q9P299 210 aa5.67□□□□□ -1.5
DEPDC1B-201ENST00000265036 TGP01266 2768 aa5.67□□□□□ -1.5
DEPDC1B-201ENST00000265036 MSGN1A6NI15 193 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 OR2A4O95047 310 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 INPP1P49441 399 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 CCR6P51684 374 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 RAB25P57735 213 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 ASPHD1Q5U4P2 390 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 TREML4Q6UXN2 200 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 ZNF562Q6V9R5 426 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 C1QL4Q86Z23 238 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 ADAD2Q8NCV1 583 aaKnown RBP5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 SGMS2Q8NHU3 365 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 OR2A7Q96R45 310 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 RNF5Q99942 180 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 HINT2Q9BX68 163 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 ALX4Q9H161 411 aaPredicted RBP5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 C5orf66Q9H5L9 145 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 VSIG4Q9Y279 399 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 A0A1B0GW64 132 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 DBX1A6NMT0 343 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 HPRT1P00492 218 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 HRASP01112 189 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 IGKV1-39P01597 117 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 IGKV1D-39P04432 117 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 IL7P13232 177 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 NQO2P16083 231 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 AKR1C4P17516 323 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 S100GP29377 79 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 PPIFP30405 207 aaKnown RBP5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 KIR2DS2P43631 304 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 TRIM16LQ309B1 348 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 SPINK9Q5DT21 86 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 CXorf66Q5JRM2 361 aaPredicted RBP5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 BORCS5Q969J3 196 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 PRRT1Q99946 306 aa5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 C14orf166Q9Y224 244 aaKnown RBP5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 TSSC4Q9Y5U2 329 aaPredicted RBP5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 PRKDCP78527 4128 aaKnown RBP5.66□□□□□ -1.5
DEPDC1B-201ENST00000265036 TEX13DA0A0J9YY54 714 aaPredicted RBP5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 RBMXL2O75526 392 aaKnown RBP5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 IGHG4P01861 327 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 PF4P02776 101 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 SERPINE2P07093 398 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 OR5AC1P0C628 307 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 OR9G9P0C7N8 305 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 AREGP15514 252 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 PSMB8P28062 276 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 AKR1C2P52895 323 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 UCP3P55916 312 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 TPPP2P59282 170 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 ERVK-16P61578 105 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 RPL23AP62750 156 aaKnown RBP5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 RPL8P62917 257 aaKnown RBP5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 MSMO1Q15800 293 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 LPCAT3Q6P1A2 487 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 MMD2Q8IY49 270 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 PUSL1Q8N0Z8 303 aaKnown RBP5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 TEX45Q8NA69 505 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 RTBDNQ9BSG5 229 aaPredicted RBP5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 GNB4Q9HAV0 340 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 AKIP1Q9NQ31 210 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 COA4Q9NYJ1 87 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 RABL2AQ9UBK7 228 aaPredicted RBP5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 SCP2D1Q9UJQ7 156 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 RABL2BQ9UNT1 228 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 FOXA2Q9Y261 457 aaPredicted RBP5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 S4R3C0 116 aa5.65□□□□□ -1.5
DEPDC1B-201ENST00000265036 C3orf85A0A1B0GTC6 90 aa5.65□□□□□ -1.51
DEPDC1B-201ENST00000265036 RBFOX2O43251 390 aaKnown RBP eCLIP5.65□□□□□ -1.515e-6■■■■□ 21.3
DEPDC1B-201ENST00000265036 RPL27AP46776 148 aaKnown RBP5.65□□□□□ -1.51
DEPDC1B-201ENST00000265036 TAS2R31P59538 309 aa5.65□□□□□ -1.51
DEPDC1B-201ENST00000265036 TMEM65Q6PI78 240 aa5.65□□□□□ -1.51
DEPDC1B-201ENST00000265036 NDUFA11Q86Y39 141 aa5.65□□□□□ -1.51
DEPDC1B-201ENST00000265036 OR10W1Q8NGF6 305 aa5.65□□□□□ -1.51
DEPDC1B-201ENST00000265036 RNASE11Q8TAA1 199 aaKnown RBP5.65□□□□□ -1.51
DEPDC1B-201ENST00000265036 LHFPL5Q8TAF8 219 aa5.65□□□□□ -1.51
DEPDC1B-201ENST00000265036 TMEM167AQ8TBQ9 72 aa5.65□□□□□ -1.51
DEPDC1B-201ENST00000265036 TMEM230Q96A57 120 aa5.65□□□□□ -1.51
DEPDC1B-201ENST00000265036 GON7Q9BXV9 100 aa5.65□□□□□ -1.51
DEPDC1B-201ENST00000265036 PLEKHA2Q9HB19 425 aa5.65□□□□□ -1.51
DEPDC1B-201ENST00000265036 NUBP2Q9Y5Y2 271 aa5.65□□□□□ -1.51
DEPDC1B-201ENST00000265036 A0A0G2JRQ6 117 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 NXPH3O95157 252 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 IGLV1-40P01703 118 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms