RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 OR8I2Q8N0Y5 310 aa11□□□□□ -0.65
NUP54-201ENST00000264883 TSKUQ8WUA8 353 aa11□□□□□ -0.65
NUP54-201ENST00000264883 PROK2Q9HC23 129 aa11□□□□□ -0.65
NUP54-201ENST00000264883 IGHV1-45A0A0A0MS14 117 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 GAGE12BA1L429 117 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 FAM90A26D6RGX4 464 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 NPIPB11E5RHQ5 1161 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 K7EN84 100 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 BCL3P20749 454 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 RHOBP62745 196 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 RELBQ01201 579 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 MPV17L2Q567V2 206 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 DCAF12Q5T6F0 453 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 OR2M7Q8NG81 312 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 OR10P1Q8NGE3 313 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 OR52L2PQ8NGH6 319 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 TMEM204Q9BSN7 226 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 TRAV38-1A0A0B4J264 116 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 TRAPPC2LH3BP13 241 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 ZNF883P0CG24 379 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 SRIP30626 198 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 DUSP3P51452 185 aaPredicted RBP10.99□□□□□ -0.65
NUP54-201ENST00000264883 CEACAM16Q2WEN9 425 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 CEACAM21Q3KPI0 293 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 ABHD3Q8WU67 409 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 IMMP1LQ96LU5 166 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 PPP1R3CQ9UQK1 317 aa10.99□□□□□ -0.65
NUP54-201ENST00000264883 A0A1W2PPV4 95 aa10.98□□□□□ -0.65
NUP54-201ENST00000264883 SPINK4O60575 86 aa10.98□□□□□ -0.65
NUP54-201ENST00000264883 RPS16P62249 146 aaKnown RBP10.98□□□□□ -0.65
NUP54-201ENST00000264883 TMEM249Q2WGJ8 235 aa10.98□□□□□ -0.65
NUP54-201ENST00000264883 TXNDC17Q9BRA2 123 aa10.98□□□□□ -0.65
NUP54-201ENST00000264883 WASHC3Q9Y3C0 194 aa10.98□□□□□ -0.65
NUP54-201ENST00000264883 H0YJW9 148 aa10.98□□□□□ -0.65
NUP54-201ENST00000264883 CORTO00230 105 aa10.98□□□□□ -0.65
NUP54-201ENST00000264883 NTN3O00634 580 aaPredicted RBP10.98□□□□□ -0.65
NUP54-201ENST00000264883 ZNF585BQ52M93 769 aa10.98□□□□□ -0.65
NUP54-201ENST00000264883 Q56UQ5 140 aa10.98□□□□□ -0.65
NUP54-201ENST00000264883 TMEM136Q6ZRR5 245 aa10.98□□□□□ -0.65
NUP54-201ENST00000264883 ZNF439Q8NDP4 499 aa10.98□□□□□ -0.65
NUP54-201ENST00000264883 TNFRSF14Q92956 283 aa10.98□□□□□ -0.65
NUP54-201ENST00000264883 TMEM45BQ96B21 275 aa10.98□□□□□ -0.65
NUP54-201ENST00000264883 ARRDC1-AS1Q9H2J1 176 aa10.98□□□□□ -0.65
NUP54-201ENST00000264883 PMS2P5A8MQ11 134 aa10.97□□□□□ -0.65
NUP54-201ENST00000264883 B3GALT5-AS1P59052 145 aa10.97□□□□□ -0.65
NUP54-201ENST00000264883 GCSAMLQ5JQS6 135 aa10.97□□□□□ -0.65
NUP54-201ENST00000264883 PLA2G2CQ5R387 149 aa10.97□□□□□ -0.65
NUP54-201ENST00000264883 MOB1BQ7L9L4 216 aa10.97□□□□□ -0.65
NUP54-201ENST00000264883 RAB1CQ92928 201 aa10.97□□□□□ -0.65
NUP54-201ENST00000264883 NDUFS8O00217 210 aa10.97□□□□□ -0.65
NUP54-201ENST00000264883 COX6A1P12074 109 aa10.97□□□□□ -0.65
NUP54-201ENST00000264883 ARF6P62330 175 aa10.97□□□□□ -0.65
NUP54-201ENST00000264883 SMIM21Q3B7S5 101 aa10.97□□□□□ -0.65
NUP54-201ENST00000264883 FAM71F2Q6NXP2 309 aa10.97□□□□□ -0.65
NUP54-201ENST00000264883 C16orf54Q6UWD8 224 aa10.97□□□□□ -0.65
NUP54-201ENST00000264883 DEFB125Q8N687 156 aa10.97□□□□□ -0.65
NUP54-201ENST00000264883 OR5A2Q8NGI9 324 aa10.97□□□□□ -0.65
NUP54-201ENST00000264883 NEUROG1Q92886 237 aa10.97□□□□□ -0.65
NUP54-201ENST00000264883 LIN7CQ9NUP9 197 aaKnown RBP10.97□□□□□ -0.65
NUP54-201ENST00000264883 BMPR1BO00238 502 aa10.96□□□□□ -0.65
NUP54-201ENST00000264883 ARF1P84077 181 aaKnown RBP10.96□□□□□ -0.65
NUP54-201ENST00000264883 TGFBR3Q03167 851 aa10.96□□□□□ -0.65
NUP54-201ENST00000264883 IL11RAQ14626 422 aa10.96□□□□□ -0.65
NUP54-201ENST00000264883 COX19Q49B96 90 aa10.96□□□□□ -0.65
NUP54-201ENST00000264883 RPS19BP1Q86WX3 136 aaKnown RBP10.96□□□□□ -0.65
NUP54-201ENST00000264883 FGFRL1Q8N441 504 aa10.96□□□□□ -0.65
NUP54-201ENST00000264883 V9GYV3 84 aa10.96□□□□□ -0.65
NUP54-201ENST00000264883 CACNA1HO95180 2353 aa10.96□□□□□ -0.65
NUP54-201ENST00000264883 COL27A1Q8IZC6 1860 aaPredicted RBP10.96□□□□□ -0.66
NUP54-201ENST00000264883 SAP30O75446 220 aa10.96□□□□□ -0.66
NUP54-201ENST00000264883 NUDT3O95989 172 aa10.96□□□□□ -0.66
NUP54-201ENST00000264883 IGLV2-14P01704 120 aa10.96□□□□□ -0.66
NUP54-201ENST00000264883 ARL14EPLP0DKL9 152 aa10.96□□□□□ -0.66
NUP54-201ENST00000264883 CX3CL1P78423 397 aa10.96□□□□□ -0.66
NUP54-201ENST00000264883 VWC2Q2TAL6 325 aa10.96□□□□□ -0.66
NUP54-201ENST00000264883 BVES-AS1Q5T3Y7 98 aa10.96□□□□□ -0.66
NUP54-201ENST00000264883 GGNQ86UU5 652 aa10.96□□□□□ -0.66
NUP54-201ENST00000264883 HS3ST6Q96QI5 342 aa10.96□□□□□ -0.66
NUP54-201ENST00000264883 LINC00470Q9BZP3 86 aa10.96□□□□□ -0.66
NUP54-201ENST00000264883 RAMP3O60896 148 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 PATE4P0C8F1 98 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 BMI1P35226 326 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 PSG9Q00887 426 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 C20orf204Q6ZNR8 217 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 MRPL21Q7Z2W9 205 aaKnown RBP10.95□□□□□ -0.66
NUP54-201ENST00000264883 WFDC8Q8IUA0 241 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 IL1F10Q8WWZ1 152 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 ST6GALNAC6Q969X2 333 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 IL36RNQ9UBH0 155 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 KCNS2Q9ULS6 477 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 ZNF318Q5VUA4 2279 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 FAM181BA6NEQ2 426 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 M0R1X1 148 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 P04436 131 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 APOBEC3AP31941 199 aaPredicted RBP10.95□□□□□ -0.66
NUP54-201ENST00000264883 ARR3P36575 388 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 EDDM3BP56851 147 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 SELENOVP59797 346 aa10.95□□□□□ -0.66
NUP54-201ENST00000264883 RPL31P62899 125 aaKnown RBP10.95□□□□□ -0.66
NUP54-201ENST00000264883 SCCPDHQ8NBX0 429 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms