RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 A1L4Q6 167 aa15.34■□□□□ 0.05
COL5A3-201ENST00000264828 SLC17A3O00476 420 aa15.34■□□□□ 0.05
COL5A3-201ENST00000264828 IGKV1D-42A0A075B6H8 117 aa15.34■□□□□ 0.05
COL5A3-201ENST00000264828 HBBP68871 147 aa15.34■□□□□ 0.05
COL5A3-201ENST00000264828 ASPHD2Q6ICH7 369 aa15.34■□□□□ 0.05
COL5A3-201ENST00000264828 TRPM6Q9BX84 2022 aa15.34■□□□□ 0.05
COL5A3-201ENST00000264828 B4E171 279 aa15.34■□□□□ 0.05
COL5A3-201ENST00000264828 NPFFO15130 113 aa15.34■□□□□ 0.05
COL5A3-201ENST00000264828 TSPAN7P41732 249 aa15.34■□□□□ 0.05
COL5A3-201ENST00000264828 ZCCHC14Q8WYQ9 949 aaKnown RBP15.34■□□□□ 0.05
COL5A3-201ENST00000264828 JPT1Q9UK76 154 aa15.34■□□□□ 0.05
COL5A3-201ENST00000264828 ATXN7O15265 892 aaPredicted RBP15.33■□□□□ 0.05
COL5A3-201ENST00000264828 FTH1P19P0C7X4 201 aa15.33■□□□□ 0.05
COL5A3-201ENST00000264828 ZNF708P17019 499 aa15.33■□□□□ 0.05
COL5A3-201ENST00000264828 C2orf68Q2NKX9 166 aa15.33■□□□□ 0.05
COL5A3-201ENST00000264828 REC114Q7Z4M0 266 aa15.33■□□□□ 0.05
COL5A3-201ENST00000264828 TMEM183AQ8IXX5 376 aa15.33■□□□□ 0.05
COL5A3-201ENST00000264828 MRAP2Q96G30 205 aa15.33■□□□□ 0.05
COL5A3-201ENST00000264828 TRAV30A0A087WSZ9 112 aa15.33■□□□□ 0.04
COL5A3-201ENST00000264828 C9JCJ5 164 aa15.33■□□□□ 0.04
COL5A3-201ENST00000264828 ATP1A1-AS1Q5TC04 95 aa15.33■□□□□ 0.04
COL5A3-201ENST00000264828 TIMP4Q99727 224 aa15.33■□□□□ 0.04
COL5A3-201ENST00000264828 TRBV9A0A0B4J1U6 114 aa15.33■□□□□ 0.04
COL5A3-201ENST00000264828 ERGP11308 486 aa15.33■□□□□ 0.04
COL5A3-201ENST00000264828 MRPL16Q9NX20 251 aaKnown RBP15.33■□□□□ 0.04
COL5A3-201ENST00000264828 DPRXA6NFQ7 191 aa15.33■□□□□ 0.04
COL5A3-201ENST00000264828 TMEM262E9PQX1 116 aa15.33■□□□□ 0.04
COL5A3-201ENST00000264828 IL6RP08887 468 aaPredicted RBP15.33■□□□□ 0.04
COL5A3-201ENST00000264828 TMEM170BQ5T4T1 132 aa15.33■□□□□ 0.04
COL5A3-201ENST00000264828 UNQ9370/PRO34162Q6UXP9 181 aa15.33■□□□□ 0.04
COL5A3-201ENST00000264828 IGHV3-49A0A0A0MS15 119 aa15.32■□□□□ 0.04
COL5A3-201ENST00000264828 STARD6P59095 220 aa15.32■□□□□ 0.04
COL5A3-201ENST00000264828 TFF3Q07654 80 aa15.32■□□□□ 0.04
COL5A3-201ENST00000264828 FAM106AQ4KMX7 169 aa15.32■□□□□ 0.04
COL5A3-201ENST00000264828 PCSK4Q6UW60 755 aa15.32■□□□□ 0.04
COL5A3-201ENST00000264828 PNKDQ8N490 385 aa15.32■□□□□ 0.04
COL5A3-201ENST00000264828 PMCHL2Q9BQD1 86 aa15.32■□□□□ 0.04
COL5A3-201ENST00000264828 ZNF146Q15072 292 aa15.32■□□□□ 0.04
COL5A3-201ENST00000264828 ACSF3Q4G176 576 aaPredicted RBP15.32■□□□□ 0.04
COL5A3-201ENST00000264828 ARID1AO14497 2285 aa15.32■□□□□ 0.04
COL5A3-201ENST00000264828 MPTX1A8MV57 137 aa15.32■□□□□ 0.04
COL5A3-201ENST00000264828 FADS6Q8N9I5 356 aa15.32■□□□□ 0.04
COL5A3-201ENST00000264828 SUMO2P61956 95 aaKnown RBP15.32■□□□□ 0.04
COL5A3-201ENST00000264828 ZNF414Q96IQ9 312 aa15.32■□□□□ 0.04
COL5A3-201ENST00000264828 KIR2DL4Q99706 377 aa15.32■□□□□ 0.04
COL5A3-201ENST00000264828 MRPL32Q9BYC8 188 aaKnown RBP15.32■□□□□ 0.04
COL5A3-201ENST00000264828 KLF4O43474 513 aa15.31■□□□□ 0.04
COL5A3-201ENST00000264828 SPAG17Q6Q759 2223 aa15.31■□□□□ 0.04
COL5A3-201ENST00000264828 SP9P0CG40 484 aa15.31■□□□□ 0.04
COL5A3-201ENST00000264828 PILRBQ9UKJ0 227 aa15.31■□□□□ 0.04
COL5A3-201ENST00000264828 AHRRA9YTQ3 701 aa15.31■□□□□ 0.04
COL5A3-201ENST00000264828 GREM1O60565 184 aa15.31■□□□□ 0.04
COL5A3-201ENST00000264828 ZP1P60852 638 aa15.31■□□□□ 0.04
COL5A3-201ENST00000264828 ICAM4Q14773 271 aa15.31■□□□□ 0.04
COL5A3-201ENST00000264828 LAMTOR1Q6IAA8 161 aa15.31■□□□□ 0.04
COL5A3-201ENST00000264828 CGAP01215 116 aa15.31■□□□□ 0.04
COL5A3-201ENST00000264828 CYP2G1PQ6ZSU1 146 aa15.31■□□□□ 0.04
COL5A3-201ENST00000264828 DNAL4O96015 105 aa15.3■□□□□ 0.04
COL5A3-201ENST00000264828 SAXO1Q8IYX7 474 aa15.3■□□□□ 0.04
COL5A3-201ENST00000264828 ZNF646O15015 1829 aaPredicted RBP15.3■□□□□ 0.04
COL5A3-201ENST00000264828 LOC105371242A0A075B767 164 aa15.3■□□□□ 0.04
COL5A3-201ENST00000264828 SCO2A0A1W2PP80 73 aa15.3■□□□□ 0.04
COL5A3-201ENST00000264828 NPPCP23582 126 aa15.3■□□□□ 0.04
COL5A3-201ENST00000264828 COPS9Q8WXC6 57 aa15.3■□□□□ 0.04
COL5A3-201ENST00000264828 EEF1AKMT3Q96AZ1 226 aa15.3■□□□□ 0.04
COL5A3-201ENST00000264828 FOXC2Q99958 501 aa15.3■□□□□ 0.04
COL5A3-201ENST00000264828 PLSCR2Q9NRY7 297 aa15.3■□□□□ 0.04
COL5A3-201ENST00000264828 ATG2BQ96BY7 2078 aa15.3■□□□□ 0.04
COL5A3-201ENST00000264828 FHL5Q5TD97 284 aa15.3■□□□□ 0.04
COL5A3-201ENST00000264828 DMRTA1Q5VZB9 504 aa15.3■□□□□ 0.04
COL5A3-201ENST00000264828 C10orf126Q8N4M7 172 aa15.3■□□□□ 0.04
COL5A3-201ENST00000264828 LOXL4Q96JB6 756 aa15.3■□□□□ 0.04
COL5A3-201ENST00000264828 PIMREGQ9BSJ6 248 aa15.3■□□□□ 0.04
COL5A3-201ENST00000264828 NPCDR1Q9BY65 106 aa15.3■□□□□ 0.04
COL5A3-201ENST00000264828 EFNB1P98172 346 aa15.3■□□□□ 0.04
COL5A3-201ENST00000264828 FAM159AQ6UWV7 190 aa15.3■□□□□ 0.04
COL5A3-201ENST00000264828 ZNRF1Q8ND25 227 aa15.3■□□□□ 0.04
COL5A3-201ENST00000264828 TBL2Q9Y4P3 447 aaKnown RBP15.3■□□□□ 0.04
COL5A3-201ENST00000264828 TMEM14DPA8MWL7 114 aa15.29■□□□□ 0.04
COL5A3-201ENST00000264828 NPIPB9F8W1W9 429 aa15.29■□□□□ 0.04
COL5A3-201ENST00000264828 NPIPB7O75200 414 aa15.29■□□□□ 0.04
COL5A3-201ENST00000264828 CTSSP25774 331 aa15.29■□□□□ 0.04
COL5A3-201ENST00000264828 NPIPB11E5RHQ5 1161 aa15.29■□□□□ 0.04
COL5A3-201ENST00000264828 COX6A1P12074 109 aa15.29■□□□□ 0.04
COL5A3-201ENST00000264828 COX6B1P14854 86 aa15.29■□□□□ 0.04
COL5A3-201ENST00000264828 TRIP12Q14669 1992 aaPredicted RBP15.29■□□□□ 0.04
COL5A3-201ENST00000264828 MSGN1A6NI15 193 aa15.29■□□□□ 0.04
COL5A3-201ENST00000264828 M0R381 172 aa15.29■□□□□ 0.04
COL5A3-201ENST00000264828 APOHP02749 345 aaPredicted RBP15.29■□□□□ 0.04
COL5A3-201ENST00000264828 PEF1Q9UBV8 284 aaKnown RBP15.29■□□□□ 0.04
COL5A3-201ENST00000264828 C1QTNF9BB2RNN3 333 aa15.29■□□□□ 0.04
COL5A3-201ENST00000264828 LINC01590Q5TEZ4 76 aa15.29■□□□□ 0.04
COL5A3-201ENST00000264828 SLC25A45Q8N413 288 aa15.29■□□□□ 0.04
COL5A3-201ENST00000264828 OR9G1Q8NH87 305 aa15.29■□□□□ 0.04
COL5A3-201ENST00000264828 LAIR2Q6ISS4 152 aa15.29■□□□□ 0.04
COL5A3-201ENST00000264828 CLEC7AQ9BXN2 247 aa15.29■□□□□ 0.04
COL5A3-201ENST00000264828 TMEM54Q969K7 222 aa15.28■□□□□ 0.04
COL5A3-201ENST00000264828 MRPS16Q9Y3D3 137 aaKnown RBP15.28■□□□□ 0.04
COL5A3-201ENST00000264828 PLXNA1Q9UIW2 1896 aa15.28■□□□□ 0.04
COL5A3-201ENST00000264828 OR5P3Q8WZ94 311 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms