RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 COMPP49747 757 aaPredicted RBP11.84□□□□□ -0.51
CDH3-201ENST00000264012 MFAP2P55001 183 aa11.84□□□□□ -0.51
CDH3-201ENST00000264012 DHRS11Q6UWP2 260 aa11.84□□□□□ -0.51
CDH3-201ENST00000264012 LRP11Q86VZ4 500 aa11.84□□□□□ -0.51
CDH3-201ENST00000264012 RBM14Q96PK6 669 aaKnown RBP11.84□□□□□ -0.51
CDH3-201ENST00000264012 COL6A6A6NMZ7 2263 aa11.83□□□□□ -0.51
CDH3-201ENST00000264012 REG1AP05451 166 aa11.83□□□□□ -0.52
CDH3-201ENST00000264012 PF4V1P10720 104 aa11.83□□□□□ -0.52
CDH3-201ENST00000264012 MDKP21741 143 aaPredicted RBP11.83□□□□□ -0.52
CDH3-201ENST00000264012 ZNF146Q15072 292 aa11.83□□□□□ -0.52
CDH3-201ENST00000264012 DNAJC4Q9NNZ3 241 aa11.83□□□□□ -0.52
CDH3-201ENST00000264012 FAM209BQ5JX69 171 aa11.83□□□□□ -0.52
CDH3-201ENST00000264012 RARRES2Q99969 163 aa11.83□□□□□ -0.52
CDH3-201ENST00000264012 DNM1P46Q6ZS02 220 aa11.83□□□□□ -0.52
CDH3-201ENST00000264012 BPIFA4PQ86YQ2 179 aa11.83□□□□□ -0.52
CDH3-201ENST00000264012 TEX29Q8N6K0 151 aa11.83□□□□□ -0.52
CDH3-201ENST00000264012 PGPA6NDG6 321 aa11.83□□□□□ -0.52
CDH3-201ENST00000264012 ZNF137PP52743 207 aa11.83□□□□□ -0.52
CDH3-201ENST00000264012 GFI1Q99684 422 aa11.83□□□□□ -0.52
CDH3-201ENST00000264012 PIMREGQ9BSJ6 248 aa11.83□□□□□ -0.52
CDH3-201ENST00000264012 SPRR3Q9UBC9 169 aa11.83□□□□□ -0.52
CDH3-201ENST00000264012 TRAV34A0A0B4J273 112 aa11.82□□□□□ -0.52
CDH3-201ENST00000264012 C8orf88P0DMB2 117 aa11.82□□□□□ -0.52
CDH3-201ENST00000264012 HTN1P15515 57 aa11.82□□□□□ -0.52
CDH3-201ENST00000264012 FAM3BP58499 235 aaPredicted RBP11.82□□□□□ -0.52
CDH3-201ENST00000264012 ELOBQ15370 118 aa11.82□□□□□ -0.52
CDH3-201ENST00000264012 FGFBP3Q8TAT2 258 aa11.82□□□□□ -0.52
CDH3-201ENST00000264012 SEMA5BQ9P283 1151 aa11.82□□□□□ -0.52
CDH3-201ENST00000264012 PLXNA3P51805 1871 aa11.82□□□□□ -0.52
CDH3-201ENST00000264012 APCSP02743 223 aa11.82□□□□□ -0.52
CDH3-201ENST00000264012 PAFAH1B2P68402 229 aa11.82□□□□□ -0.52
CDH3-201ENST00000264012 PCSK4Q6UW60 755 aa11.82□□□□□ -0.52
CDH3-201ENST00000264012 DOCK8Q8NF50 2099 aa11.82□□□□□ -0.52
CDH3-201ENST00000264012 C17orf98A8MV24 154 aa11.82□□□□□ -0.52
CDH3-201ENST00000264012 PRSS1P07477 247 aa11.82□□□□□ -0.52
CDH3-201ENST00000264012 ARL14EPLP0DKL9 152 aa11.82□□□□□ -0.52
CDH3-201ENST00000264012 MFAP4P55083 255 aa11.82□□□□□ -0.52
CDH3-201ENST00000264012 GGNQ86UU5 652 aa11.82□□□□□ -0.52
CDH3-201ENST00000264012 PAQR4Q8N4S7 273 aaPredicted RBP11.82□□□□□ -0.52
CDH3-201ENST00000264012 EAF1Q96JC9 268 aaPredicted RBP11.82□□□□□ -0.52
CDH3-201ENST00000264012 J3QR89 54 aa11.82□□□□□ -0.52
CDH3-201ENST00000264012 SLC35B1P78383 322 aa11.82□□□□□ -0.52
CDH3-201ENST00000264012 CARHSP1Q9Y2V2 147 aaKnown RBP11.82□□□□□ -0.52
CDH3-201ENST00000264012 IGKV3D-15A0A087WSY6 115 aa11.81□□□□□ -0.52
CDH3-201ENST00000264012 A8MWL6 223 aa11.81□□□□□ -0.52
CDH3-201ENST00000264012 IGHV3-48P01763 117 aa11.81□□□□□ -0.52
CDH3-201ENST00000264012 PPOXP50336 477 aa11.81□□□□□ -0.52
CDH3-201ENST00000264012 WDFY1Q8IWB7 410 aa11.81□□□□□ -0.52
CDH3-201ENST00000264012 PLPPR1Q8TBJ4 325 aa11.81□□□□□ -0.52
CDH3-201ENST00000264012 NPIPB3Q92617 1050 aa11.81□□□□□ -0.52
CDH3-201ENST00000264012 COL4A6Q14031 1691 aa11.81□□□□□ -0.52
CDH3-201ENST00000264012 TM4SF5O14894 197 aa11.81□□□□□ -0.52
CDH3-201ENST00000264012 CRYGSP22914 178 aa11.81□□□□□ -0.52
CDH3-201ENST00000264012 RBPMS2Q6ZRY4 209 aaKnown RBP11.81□□□□□ -0.52
CDH3-201ENST00000264012 FAM89BQ8N5H3 189 aa11.81□□□□□ -0.52
CDH3-201ENST00000264012 KBTBD11-OT1A0A1B0GTJ5 212 aa11.81□□□□□ -0.52
CDH3-201ENST00000264012 NUBP1P53384 320 aa11.81□□□□□ -0.52
CDH3-201ENST00000264012 DYNLRB2Q8TF09 96 aa11.81□□□□□ -0.52
CDH3-201ENST00000264012 PSMG3Q9BT73 122 aaPredicted RBP11.81□□□□□ -0.52
CDH3-201ENST00000264012 CXorf65A6NEN9 183 aa11.81□□□□□ -0.52
CDH3-201ENST00000264012 FOXG1P55316 489 aaPredicted RBP11.81□□□□□ -0.52
CDH3-201ENST00000264012 HOXA4Q00056 320 aaPredicted RBP11.81□□□□□ -0.52
CDH3-201ENST00000264012 OR4C5Q8NGB2 326 aa11.81□□□□□ -0.52
CDH3-201ENST00000264012 CHODLQ9H9P2 273 aa11.81□□□□□ -0.52
CDH3-201ENST00000264012 RPRMQ9NS64 109 aa11.81□□□□□ -0.52
CDH3-201ENST00000264012 C17orf100A8MU93 164 aa11.8□□□□□ -0.52
CDH3-201ENST00000264012 IBA57Q5T440 356 aaKnown RBP11.8□□□□□ -0.52
CDH3-201ENST00000264012 FAM90A1Q86YD7 464 aa11.8□□□□□ -0.52
CDH3-201ENST00000264012 NABP2Q9BQ15 211 aa11.8□□□□□ -0.52
CDH3-201ENST00000264012 TMEM191AQ9H0A3 160 aa11.8□□□□□ -0.52
CDH3-201ENST00000264012 BMPR1BO00238 502 aa11.8□□□□□ -0.52
CDH3-201ENST00000264012 FCGR2BP31994 310 aaPredicted RBP11.8□□□□□ -0.52
CDH3-201ENST00000264012 ID1P41134 155 aa11.8□□□□□ -0.52
CDH3-201ENST00000264012 ATP5IP56385 69 aaPredicted RBP11.8□□□□□ -0.52
CDH3-201ENST00000264012 TMEM116Q8NCL8 245 aa11.8□□□□□ -0.52
CDH3-201ENST00000264012 OR51G1Q8NGK1 321 aa11.8□□□□□ -0.52
CDH3-201ENST00000264012 OSR1Q8TAX0 266 aaPredicted RBP11.8□□□□□ -0.52
CDH3-201ENST00000264012 CA2P00918 260 aa11.8□□□□□ -0.52
CDH3-201ENST00000264012 PDLIM4P50479 330 aa11.8□□□□□ -0.52
CDH3-201ENST00000264012 METTL26Q96S19 204 aa11.8□□□□□ -0.52
CDH3-201ENST00000264012 WDR81Q562E7 1941 aa11.8□□□□□ -0.52
CDH3-201ENST00000264012 FXYD3Q14802 87 aa11.79□□□□□ -0.52
CDH3-201ENST00000264012 TRBV6-7A0A0A0MS04 114 aa11.79□□□□□ -0.52
CDH3-201ENST00000264012 STPG3Q8N7X2 389 aa11.79□□□□□ -0.52
CDH3-201ENST00000264012 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.79□□□□□ -0.52
CDH3-201ENST00000264012 NABP1Q96AH0 204 aa11.79□□□□□ -0.52
CDH3-201ENST00000264012 FOXH1O75593 365 aa11.79□□□□□ -0.52
CDH3-201ENST00000264012 BET1LQ9NYM9 111 aa11.79□□□□□ -0.52
CDH3-201ENST00000264012 DMRT1Q9Y5R6 373 aa11.79□□□□□ -0.52
CDH3-201ENST00000264012 RNF222A6NCQ9 220 aa11.79□□□□□ -0.52
CDH3-201ENST00000264012 Q0VFX4 171 aa11.79□□□□□ -0.52
CDH3-201ENST00000264012 TMEM78Q5T7P6 136 aa11.79□□□□□ -0.52
CDH3-201ENST00000264012 TRAV30A0A087WSZ9 112 aa11.78□□□□□ -0.52
CDH3-201ENST00000264012 NPIPB11E5RHQ5 1161 aa11.78□□□□□ -0.52
CDH3-201ENST00000264012 PEAR1Q5VY43 1037 aaPredicted RBP11.78□□□□□ -0.52
CDH3-201ENST00000264012 C19orf24Q9BVV8 132 aa11.78□□□□□ -0.52
CDH3-201ENST00000264012 IGKV1D-13A0A0B4J2D9 117 aa11.78□□□□□ -0.52
CDH3-201ENST00000264012 TRGC2P03986 189 aa11.78□□□□□ -0.52
CDH3-201ENST00000264012 IGKV1-13P0DP09 117 aa11.78□□□□□ -0.52
CDH3-201ENST00000264012 SPANXN1Q5VSR9 72 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms