RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 FDCSPQ8NFU4 85 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 ZPBPQ9BS86 351 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 LRBAP50851 2863 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.57□□□□□ -1.2
MSH4-201ENST00000263187 IQCF6A8MYZ5 107 aa7.57□□□□□ -1.2
MSH4-201ENST00000263187 SPINT2O43291 252 aa7.57□□□□□ -1.2
MSH4-201ENST00000263187 CBLN1P23435 193 aa7.57□□□□□ -1.2
MSH4-201ENST00000263187 OR5I1Q13606 314 aa7.57□□□□□ -1.2
MSH4-201ENST00000263187 MSMPQ1L6U9 139 aa7.57□□□□□ -1.2
MSH4-201ENST00000263187 ACOT6Q3I5F7 207 aaPredicted RBP7.57□□□□□ -1.2
MSH4-201ENST00000263187 FAM214BQ7L5A3 538 aa7.57□□□□□ -1.2
MSH4-201ENST00000263187 SNRNP40Q96DI7 357 aaKnown RBP7.57□□□□□ -1.2
MSH4-201ENST00000263187 AGMATQ9BSE5 352 aa7.57□□□□□ -1.2
MSH4-201ENST00000263187 SEPSECSQ9HD40 501 aaKnown RBP7.57□□□□□ -1.2
MSH4-201ENST00000263187 CDX4O14627 284 aaPredicted RBP7.57□□□□□ -1.2
MSH4-201ENST00000263187 IGHV3-48P01763 117 aa7.57□□□□□ -1.2
MSH4-201ENST00000263187 HLA-DRB5Q30154 266 aa7.57□□□□□ -1.2
MSH4-201ENST00000263187 MOGAT3Q86VF5 341 aa7.57□□□□□ -1.2
MSH4-201ENST00000263187 GMPPAQ96IJ6 420 aaPredicted RBP7.57□□□□□ -1.2
MSH4-201ENST00000263187 FER1L6-AS2Q96M78 137 aa7.57□□□□□ -1.2
MSH4-201ENST00000263187 CBLN4Q9NTU7 201 aa7.57□□□□□ -1.2
MSH4-201ENST00000263187 ZNF705FA8MVS1 300 aaPredicted RBP7.56□□□□□ -1.2
MSH4-201ENST00000263187 C21orf140B9A014 251 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 FAM90A26D6RGX4 464 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 C17orf112F2Z3M2 114 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 TMEM250H0YL14 139 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 P0C879 139 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 ZNF705DP0CH99 300 aaPredicted RBP7.56□□□□□ -1.2
MSH4-201ENST00000263187 ZNF705BP0CI00 300 aaPredicted RBP7.56□□□□□ -1.2
MSH4-201ENST00000263187 G0S2P27469 103 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 JOSD1Q15040 202 aaPredicted RBP7.56□□□□□ -1.2
MSH4-201ENST00000263187 SSX2Q16385 188 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 MLANAQ16655 118 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 CYB5R2Q6BCY4 276 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 TREML4Q6UXN2 200 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 REC114Q7Z4M0 266 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 CXXC4Q9H2H0 198 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 PXMP4Q9Y6I8 212 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 SPTA1P02549 2419 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 TET2Q6N021 2002 aaPredicted RBP7.56□□□□□ -1.2
MSH4-201ENST00000263187 RAB29O14966 203 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 MBP02144 154 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 DUTP33316 252 aaKnown RBP7.56□□□□□ -1.2
MSH4-201ENST00000263187 TCL1AP56279 114 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 SMIM21Q3B7S5 101 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 SLC35E4Q6ICL7 350 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 TGIF2LYQ8IUE0 185 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 TGIF2LXQ8IUE1 241 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 Q8N7P7 452 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 WDR31Q8NA23 367 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 MGST2Q99735 147 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 MANBALQ9NQG1 85 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 YTHDF2Q9Y5A9 579 aaKnown RBP7.56□□□□□ -1.2
MSH4-201ENST00000263187 ASH1LQ9NR48 2969 aaKnown RBP7.56□□□□□ -1.2
MSH4-201ENST00000263187 IGKV1D-17A0A075B6S4 117 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 AHRRA9YTQ3 701 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 F6UZH7 168 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 EREGO14944 169 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 KIR2DL2P43627 348 aaPredicted RBP7.56□□□□□ -1.2
MSH4-201ENST00000263187 LHFPL4Q7Z7J7 247 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 OCC1Q8TAD7 63 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 FAM216AQ8WUB2 273 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 TAAR6Q96RI8 345 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 CEP295Q9C0D2 2601 aa7.56□□□□□ -1.2
MSH4-201ENST00000263187 F2Z2F3 143 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 M0R1B8 84 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 DLL1O00548 723 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 KITLGP21583 273 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 TNFSF10P50591 281 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 CNN1P51911 297 aaKnown RBP7.55□□□□□ -1.2
MSH4-201ENST00000263187 PAX5Q02548 391 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 EIF4EBP1Q13541 118 aaPredicted RBP7.55□□□□□ -1.2
MSH4-201ENST00000263187 ATP6V1FQ16864 119 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 TDRG1Q3Y452 100 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 TEX38Q6PEX7 206 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 KCNIP4Q6PIL6 250 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 Q6ZT83 130 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 RPRMLQ8N4K4 120 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 OR4P4Q8NGL7 312 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 TMEM170AQ8WVE7 144 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 FAM103A1Q9BTL3 118 aaKnown RBP7.55□□□□□ -1.2
MSH4-201ENST00000263187 HIPK2Q9H2X6 1198 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 TMEM140Q9NV12 185 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 TIMM9Q9Y5J7 89 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 OR10J4P0C629 311 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 PRB4P10163 310 aaPredicted RBP7.55□□□□□ -1.2
MSH4-201ENST00000263187 KIAA1644Q3SXP7 199 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 ACTL10Q5JWF8 245 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 LYG1Q8N1E2 194 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 ZCCHC24Q8N2G6 241 aaKnown RBP7.55□□□□□ -1.2
MSH4-201ENST00000263187 NHLRC2Q8NBF2 726 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 TMEM178AQ8NBL3 297 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 RND1Q92730 232 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 CIB3Q96Q77 187 aaPredicted RBP7.55□□□□□ -1.2
MSH4-201ENST00000263187 S1PR3Q99500 378 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 GCM1Q9NP62 436 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 DCAF16Q9NXF7 216 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 NAV3Q8IVL0 2385 aa7.55□□□□□ -1.2
MSH4-201ENST00000263187 PIGBOS1A0A0B4J2F0 54 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 MDFIC2A0A1B0GVS7 189 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms