RNA–Protein interactions for RNA: ENST00000262354.4

D21S2088E-201, humanhuman

TSL 1 (best) BASIC

Gene D21S2088E, Length 1,725 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
D21S2088E-201ENST00000262354 A0A1B0GUS0 222 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 LOC102725191A0A1B0GVB3 256 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 A0A1W2PNV4 684 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 IGLC7A0M8Q6 106 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 NPIPA5E9PKD4 350 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 HCRTR1O43613 425 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 CHST1O43916 411 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 SERF1AO75920 110 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 EML2O95834 649 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 NRASP01111 189 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 KRASP01116 189 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 PPYP01298 95 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 CXCL10P02778 98 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 GPX1P07203 203 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 CTSEP14091 401 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 TSPOP30536 169 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 GNRHRP30968 328 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 ARR3P36575 388 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 OR1D4P47884 311 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 HNRNPA3P51991 378 aaKnown RBP3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 FUT6P51993 359 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 EFNA3P52797 238 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 FGF8P55075 233 aaPredicted RBP3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 DSCR9P59020 149 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 FXYD4P59646 89 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 HERV-K104P61576 105 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 GRB2P62993 217 aaKnown RBP3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 CX3CL1P78423 397 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 ARG2P78540 354 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 RPL24P83731 157 aaKnown RBP3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 RPL19P84098 196 aaKnown RBP3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 SPATA45Q537H7 98 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 OCIAD2Q56VL3 154 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 LRRC10Q5BKY1 277 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 FAM78BQ5VT40 261 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 ZNF695Q8IW36 515 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 BATF2Q8N1L9 274 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 ZIC4Q8N9L1 334 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 FGFBP3Q8TAT2 258 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 SCGB1C1Q8TD33 95 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 VN1R17PQ8TDU5 208 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 LHX4Q969G2 390 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 FAM131CQ96AQ9 280 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 APH1AQ96BI3 265 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 RPUSD4Q96CM3 377 aaKnown RBP3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 SMIM12Q96EX1 92 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 DNAJA3Q96EY1 480 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 LYZL4Q96KX0 146 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 BMFQ96LC9 184 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 SGK494Q96LW2 274 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 RSG1Q9BU20 258 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 WDR61Q9GZS3 305 aaKnown RBP3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 CST9LQ9H4G1 147 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 FAM60AQ9NP50 221 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 PRTFDC1Q9NRG1 225 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 BET1LQ9NYM9 111 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 IL36GQ9NZH8 169 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 NPIPA1Q9UND3 350 aa3.09□□□□□ -1.91
D21S2088E-201ENST00000262354 DOCK11Q5JSL3 2073 aa3.09□□□□□ -1.92
D21S2088E-201ENST00000262354 TNRC6BQ9UPQ9 1833 aaKnown RBP3.09□□□□□ -1.92
D21S2088E-201ENST00000262354 PCDH15Q96QU1 1955 aa3.09□□□□□ -1.92
D21S2088E-201ENST00000262354 KIAA1549Q9HCM3 1950 aa3.09□□□□□ -1.92
D21S2088E-201ENST00000262354 ARID1AO14497 2285 aa3.09□□□□□ -1.92
D21S2088E-201ENST00000262354 SHANK1Q9Y566 2161 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 OR5B21A6NL26 309 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 ZNF716A6NP11 495 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 RNF212BA8MTL3 300 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 H0Y980 276 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 SYNGR3O43761 229 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 RAMP3O60896 148 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 ZNF253O75346 499 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 DHRS3O75911 302 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 IGKV1D-33P01593 117 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 IGKV1-33P01594 117 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 IGHG1P01857 330 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 CRISP2P16562 243 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 ANOS1P23352 680 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 NPPCP23582 126 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 CLDN18P56856 261 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 OR1D5P58170 312 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 RPS18P62269 152 aaKnown RBP3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 GAGE5Q13069 117 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 GAGE6Q13070 117 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 HIST3H3Q16695 136 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 OR10J3Q5JRS4 329 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 SLC25A47Q6Q0C1 308 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 UNQ5815/PRO19632Q6UWF5 114 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 Q6ZN92 141 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 C19orf35Q6ZS72 473 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 LHFPL4Q7Z7J7 247 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 CALHM1Q8IU99 346 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 MUC15Q8N387 334 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 RPP25LQ8N5L8 163 aaKnown RBP3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 TCTEX1D1Q8N7M0 179 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 ZNF709Q8N972 641 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 SUMF1Q8NBK3 374 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 OR4C5Q8NGB2 326 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 OR1E3Q8WZA6 343 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 ADIPOR1Q96A54 375 aa3.08□□□□□ -1.92
D21S2088E-201ENST00000262354 STARD4Q96DR4 205 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms