RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 KLRB1Q12918 225 aa11.22□□□□□ -0.61
VMP1-201ENST00000262291 ANKRD39Q53RE8 183 aa11.22□□□□□ -0.61
VMP1-201ENST00000262291 SPANXN5Q5MJ07 72 aa11.22□□□□□ -0.61
VMP1-201ENST00000262291 DTD1Q8TEA8 209 aa11.22□□□□□ -0.61
VMP1-201ENST00000262291 DLL1O00548 723 aa11.22□□□□□ -0.61
VMP1-201ENST00000262291 SYNGR2O43760 224 aa11.22□□□□□ -0.61
VMP1-201ENST00000262291 DANCRP0C864 163 aa11.22□□□□□ -0.61
VMP1-201ENST00000262291 FGF7P21781 194 aa11.22□□□□□ -0.61
VMP1-201ENST00000262291 PRAMEF5Q5TYX0 476 aa11.22□□□□□ -0.61
VMP1-201ENST00000262291 PSENENQ9NZ42 101 aa11.22□□□□□ -0.61
VMP1-201ENST00000262291 CLN8Q9UBY8 286 aa11.22□□□□□ -0.61
VMP1-201ENST00000262291 TACC2O95359 2948 aa11.21□□□□□ -0.61
VMP1-201ENST00000262291 ELOA3CA0A087WX78 387 aaPredicted RBP11.21□□□□□ -0.61
VMP1-201ENST00000262291 RNF212BA8MTL3 300 aa11.21□□□□□ -0.61
VMP1-201ENST00000262291 FCN3O75636 299 aa11.21□□□□□ -0.61
VMP1-201ENST00000262291 ATP6V0CP27449 155 aa11.21□□□□□ -0.61
VMP1-201ENST00000262291 CA7P43166 264 aa11.21□□□□□ -0.61
VMP1-201ENST00000262291 LYPD2Q6UXB3 125 aa11.21□□□□□ -0.61
VMP1-201ENST00000262291 FAM222BQ8WU58 562 aa11.21□□□□□ -0.61
VMP1-201ENST00000262291 ZDHHC16Q969W1 377 aa11.21□□□□□ -0.61
VMP1-201ENST00000262291 DSCAML1Q8TD84 2053 aa11.21□□□□□ -0.61
VMP1-201ENST00000262291 ADH4P08319 380 aa11.21□□□□□ -0.62
VMP1-201ENST00000262291 HTD2P86397 168 aa11.21□□□□□ -0.62
VMP1-201ENST00000262291 CATR1Q13166 79 aa11.21□□□□□ -0.62
VMP1-201ENST00000262291 THNSL2Q86YJ6 484 aa11.21□□□□□ -0.62
VMP1-201ENST00000262291 OR5R1Q8NH85 324 aa11.21□□□□□ -0.62
VMP1-201ENST00000262291 LSM10Q969L4 123 aaKnown RBP11.21□□□□□ -0.62
VMP1-201ENST00000262291 RAB24Q969Q5 203 aa11.21□□□□□ -0.62
VMP1-201ENST00000262291 GINS3Q9BRX5 216 aa11.21□□□□□ -0.62
VMP1-201ENST00000262291 PBDC1Q9BVG4 233 aa11.21□□□□□ -0.62
VMP1-201ENST00000262291 ZNF665Q9H7R5 613 aa11.21□□□□□ -0.62
VMP1-201ENST00000262291 GOLT1BQ9Y3E0 138 aa11.21□□□□□ -0.62
VMP1-201ENST00000262291 SIAH2O43255 324 aa11.2□□□□□ -0.62
VMP1-201ENST00000262291 PRB3Q04118 309 aaPredicted RBP11.2□□□□□ -0.62
VMP1-201ENST00000262291 OR2G3Q8NGZ4 309 aa11.2□□□□□ -0.62
VMP1-201ENST00000262291 SDSLQ96GA7 329 aa11.2□□□□□ -0.62
VMP1-201ENST00000262291 ARV1Q9H2C2 271 aa11.2□□□□□ -0.62
VMP1-201ENST00000262291 RBKSQ9H477 322 aa11.2□□□□□ -0.62
VMP1-201ENST00000262291 HCFC1P51610 2035 aa11.2□□□□□ -0.62
VMP1-201ENST00000262291 TANC2Q9HCD6 1990 aa11.2□□□□□ -0.62
VMP1-201ENST00000262291 CCL3L1P16619 93 aa11.2□□□□□ -0.62
VMP1-201ENST00000262291 TNFRSF1AP19438 455 aa11.2□□□□□ -0.62
VMP1-201ENST00000262291 RPL23AP62750 156 aaKnown RBP11.2□□□□□ -0.62
VMP1-201ENST00000262291 RPP30P78346 268 aaKnown RBP11.2□□□□□ -0.62
VMP1-201ENST00000262291 ADORA2A-AS1P86434 159 aa11.2□□□□□ -0.62
VMP1-201ENST00000262291 CT45A1Q5HYN5 189 aa11.2□□□□□ -0.62
VMP1-201ENST00000262291 OR8G2PQ6IF36 304 aa11.2□□□□□ -0.62
VMP1-201ENST00000262291 ZNF788Q6ZQV5 615 aa11.2□□□□□ -0.62
VMP1-201ENST00000262291 HAPLN4Q86UW8 402 aa11.2□□□□□ -0.62
VMP1-201ENST00000262291 CT45A3Q8NHU0 189 aa11.2□□□□□ -0.62
VMP1-201ENST00000262291 H1FXQ92522 213 aaKnown RBP11.2□□□□□ -0.62
VMP1-201ENST00000262291 RNASE6Q93091 150 aaKnown RBP11.2□□□□□ -0.62
VMP1-201ENST00000262291 TMEM208Q9BTX3 173 aa11.2□□□□□ -0.62
VMP1-201ENST00000262291 IFI27L2Q9H2X8 130 aa11.2□□□□□ -0.62
VMP1-201ENST00000262291 OR6C3Q9NZP0 311 aa11.2□□□□□ -0.62
VMP1-201ENST00000262291 TRGV10A0A0A0MS01 117 aa11.19□□□□□ -0.62
VMP1-201ENST00000262291 CD55P08174 381 aa11.19□□□□□ -0.62
VMP1-201ENST00000262291 JOSD1Q15040 202 aaPredicted RBP11.19□□□□□ -0.62
VMP1-201ENST00000262291 LYG1Q8N1E2 194 aa11.19□□□□□ -0.62
VMP1-201ENST00000262291 AMBPP02760 352 aa11.19□□□□□ -0.62
VMP1-201ENST00000262291 CD3EP07766 207 aa11.19□□□□□ -0.62
VMP1-201ENST00000262291 DUTP33316 252 aaKnown RBP11.19□□□□□ -0.62
VMP1-201ENST00000262291 SLC25A24Q6NUK1 477 aa11.19□□□□□ -0.62
VMP1-201ENST00000262291 H2BFWTQ7Z2G1 175 aa11.19□□□□□ -0.62
VMP1-201ENST00000262291 CYB561D1Q8N8Q1 229 aa11.19□□□□□ -0.62
VMP1-201ENST00000262291 FAM210BQ96KR6 192 aa11.19□□□□□ -0.62
VMP1-201ENST00000262291 JPT1Q9UK76 154 aa11.19□□□□□ -0.62
VMP1-201ENST00000262291 KBTBD11-OT1A0A1B0GTJ5 212 aa11.18□□□□□ -0.62
VMP1-201ENST00000262291 LY6HO94772 140 aa11.18□□□□□ -0.62
VMP1-201ENST00000262291 CGB3P0DN86 165 aa11.18□□□□□ -0.62
VMP1-201ENST00000262291 CGB7P0DN87 165 aa11.18□□□□□ -0.62
VMP1-201ENST00000262291 DLX1P56177 255 aa11.18□□□□□ -0.62
VMP1-201ENST00000262291 TRAT1Q6PIZ9 186 aa11.18□□□□□ -0.62
VMP1-201ENST00000262291 ZNF429Q86V71 674 aa11.18□□□□□ -0.62
VMP1-201ENST00000262291 ZBTB34Q8NCN2 500 aa11.18□□□□□ -0.62
VMP1-201ENST00000262291 Q8TCH9 128 aa11.18□□□□□ -0.62
VMP1-201ENST00000262291 NOL4LQ96MY1 436 aaPredicted RBP11.18□□□□□ -0.62
VMP1-201ENST00000262291 RSG1Q9BU20 258 aa11.18□□□□□ -0.62
VMP1-201ENST00000262291 HIVEP3Q5T1R4 2406 aa11.18□□□□□ -0.62
VMP1-201ENST00000262291 COL12A1Q99715 3063 aa11.18□□□□□ -0.62
VMP1-201ENST00000262291 LRRC30A6NM36 301 aa11.18□□□□□ -0.62
VMP1-201ENST00000262291 F2RL2O00254 374 aa11.18□□□□□ -0.62
VMP1-201ENST00000262291 ZG16O60844 167 aa11.18□□□□□ -0.62
VMP1-201ENST00000262291 OR9G9P0C7N8 305 aa11.18□□□□□ -0.62
VMP1-201ENST00000262291 ZCCHC14Q8WYQ9 949 aaKnown RBP11.18□□□□□ -0.62
VMP1-201ENST00000262291 NGBQ9NPG2 151 aa11.18□□□□□ -0.62
VMP1-201ENST00000262291 TMEM106BQ9NUM4 274 aa11.18□□□□□ -0.62
VMP1-201ENST00000262291 CISD1Q9NZ45 108 aaKnown RBP11.18□□□□□ -0.62
VMP1-201ENST00000262291 SLC25A10Q9UBX3 287 aaPredicted RBP11.18□□□□□ -0.62
VMP1-201ENST00000262291 HRNRQ86YZ3 2850 aaPredicted RBP11.18□□□□□ -0.62
VMP1-201ENST00000262291 TRAV3A0A0B4J244 114 aa11.17□□□□□ -0.62
VMP1-201ENST00000262291 TMEM178BH3BS89 294 aa11.17□□□□□ -0.62
VMP1-201ENST00000262291 YPEL1O60688 119 aa11.17□□□□□ -0.62
VMP1-201ENST00000262291 SEC11BP0C7V7 166 aa11.17□□□□□ -0.62
VMP1-201ENST00000262291 COMMD1Q8N668 190 aa11.17□□□□□ -0.62
VMP1-201ENST00000262291 R3HDM4Q96D70 268 aa11.17□□□□□ -0.62
VMP1-201ENST00000262291 YPEL2Q96QA6 119 aa11.17□□□□□ -0.62
VMP1-201ENST00000262291 RAB40CQ96S21 281 aa11.17□□□□□ -0.62
VMP1-201ENST00000262291 QTRT1Q9BXR0 403 aaKnown RBP11.17□□□□□ -0.62
VMP1-201ENST00000262291 AKAP6Q13023 2319 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms