RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 CECR9P0C854 216 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 SELLP14151 372 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 TNFSF4P23510 183 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 GATA2P23769 480 aaPredicted RBP3.97□□□□□ -1.77
USP44-201ENST00000258499 IL3RAP26951 378 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 TPPP2P59282 170 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 RPL31P62899 125 aaKnown RBP3.97□□□□□ -1.77
USP44-201ENST00000258499 SUMO1P63165 101 aaKnown RBP3.97□□□□□ -1.77
USP44-201ENST00000258499 GABRA6Q16445 453 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 ACP7Q6ZNF0 438 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 Q6ZSR3 168 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 WDR86Q86TI4 376 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 OR8I2Q8N0Y5 310 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 RBMXL3Q8N7X1 1067 aaKnown RBP3.97□□□□□ -1.77
USP44-201ENST00000258499 OR1L6Q8NGR2 347 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 C14orf144Q96I85 54 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 MS4A5Q9H3V2 200 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 ZNF586Q9NXT0 402 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 HSPB7Q9UBY9 170 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 TCF19Q9Y242 345 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 BDP1A6H8Y1 2624 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 ZFHX2Q9C0A1 2572 aaPredicted RBP3.97□□□□□ -1.77
USP44-201ENST00000258499 CXorf1O96002 111 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 HPRT1P00492 218 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 OR9G9P0C7N8 305 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 CCKARP32238 428 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 SPCS3P61009 180 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 OR5I1Q13606 314 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 RNFT1Q5M7Z0 435 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 TEPPQ6URK8 271 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 TMEM14EPQ6UXP3 125 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 CISD2Q8N5K1 135 aaKnown RBP3.97□□□□□ -1.77
USP44-201ENST00000258499 NHLRC2Q8NBF2 726 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 SLC24A4Q8NFF2 622 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 FAM122AQ96E09 287 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 SFRP2Q96HF1 295 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 VAMP8Q9BV40 100 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 NPVFQ9HCQ7 196 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 ZNF331Q9NQX6 463 aaPredicted RBP3.97□□□□□ -1.77
USP44-201ENST00000258499 OR6C3Q9NZP0 311 aa3.97□□□□□ -1.77
USP44-201ENST00000258499 MRPS18CQ9Y3D5 142 aaKnown RBP3.97□□□□□ -1.77
USP44-201ENST00000258499 FRYLO94915 3013 aa3.96□□□□□ -1.77
USP44-201ENST00000258499 TRAV17A0A0B4J275 112 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 TMPRSS2O15393 492 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 ZNF253O75346 499 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 PLAUP00749 431 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 ACP1P24666 158 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 CAMPP49913 170 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 KLF3P57682 345 aaPredicted RBP3.96□□□□□ -1.78
USP44-201ENST00000258499 FOXF2Q12947 444 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 JOSD1Q15040 202 aaPredicted RBP3.96□□□□□ -1.78
USP44-201ENST00000258499 SRSF7Q16629 238 aaKnown RBP eCLIP3.96□□□□□ -1.78
USP44-201ENST00000258499 SLC35E4Q6ICL7 350 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 DOLPP1Q86YN1 238 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 ODF3L1Q8IXM7 274 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 TMEM256Q8N2U0 113 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 ITLN1Q8WWA0 313 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 SLC35E1Q96K37 410 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 SGK494Q96LW2 274 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 RAB9BQ9NP90 201 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 CLCF1Q9UBD9 225 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 INTS1Q8N201 2190 aaKnown RBP3.96□□□□□ -1.78
USP44-201ENST00000258499 LRP4O75096 1905 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 HELTA6NFD8 242 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 J3QR06 171 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 IFNL4K9M1U5 179 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 M0R143 59 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 ZNF25P17030 456 aaPredicted RBP3.96□□□□□ -1.78
USP44-201ENST00000258499 CRYBB3P26998 211 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 SRP14P37108 136 aaKnown RBP3.96□□□□□ -1.78
USP44-201ENST00000258499 GNB2P62879 340 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 CCL8P80075 99 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 ZNF146Q15072 292 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 RTL8BQ17RB0 113 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 WDR82Q6UXN9 313 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 UNQ6494/PRO21346Q6UXR6 183 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 PQLC2Q6ZP29 291 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 WFDC8Q8IUA0 241 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 ZNF439Q8NDP4 499 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 DEFB124Q8NES8 71 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 FDCSPQ8NFU4 85 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 OR10X1Q8NGY0 326 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 BORCS7Q96B45 105 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 MISP3Q96FF7 219 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 COQ2Q96H96 371 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 CCL13Q99616 98 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 SLC35D1Q9NTN3 355 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 TMEM242Q9NWH2 141 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 NAGKQ9UJ70 344 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 TIMM9Q9Y5J7 89 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 TNCP24821 2201 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 PIEZO2Q9H5I5 2752 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 TRAV3A0A0B4J244 114 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 SPAARA0A1B0GVQ0 90 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 MGST3O14880 152 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 CGAP01215 116 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 GCGP01275 180 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 APOA2P02652 100 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 PFN1P07737 140 aaKnown RBP3.96□□□□□ -1.78
USP44-201ENST00000258499 GZMBP10144 247 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms