RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 DRAM1Q8N682 238 aa12.17□□□□□ -0.46
ZC3H4-201ENST00000253048 VAX2Q9UIW0 290 aa12.17□□□□□ -0.46
ZC3H4-201ENST00000253048 RBFOX3A6NFN3 312 aa12.17□□□□□ -0.46
ZC3H4-201ENST00000253048 ASIPP42127 132 aa12.17□□□□□ -0.46
ZC3H4-201ENST00000253048 RBM38Q9H0Z9 239 aaKnown RBP12.17□□□□□ -0.46
ZC3H4-201ENST00000253048 DNLZQ5SXM8 178 aa12.17□□□□□ -0.46
ZC3H4-201ENST00000253048 FOXA2Q9Y261 457 aaPredicted RBP12.17□□□□□ -0.46
ZC3H4-201ENST00000253048 ASCL4Q6XD76 172 aa12.16□□□□□ -0.46
ZC3H4-201ENST00000253048 DNAJC4Q9NNZ3 241 aa12.16□□□□□ -0.46
ZC3H4-201ENST00000253048 NEU3Q9UQ49 428 aa12.16□□□□□ -0.46
ZC3H4-201ENST00000253048 RNF223E7ERA6 249 aa12.16□□□□□ -0.46
ZC3H4-201ENST00000253048 RNASE4P34096 147 aaKnown RBP12.16□□□□□ -0.46
ZC3H4-201ENST00000253048 LHFPL6Q9Y693 200 aa12.16□□□□□ -0.46
ZC3H4-201ENST00000253048 MRPL14Q6P1L8 145 aaKnown RBP12.16□□□□□ -0.46
ZC3H4-201ENST00000253048 UQCC3Q6UW78 93 aa12.16□□□□□ -0.46
ZC3H4-201ENST00000253048 RAB24Q969Q5 203 aa12.16□□□□□ -0.46
ZC3H4-201ENST00000253048 HIST1H4GQ99525 98 aa12.16□□□□□ -0.46
ZC3H4-201ENST00000253048 BEX4Q9NWD9 120 aaPredicted RBP12.16□□□□□ -0.46
ZC3H4-201ENST00000253048 COL11A2P13942 1736 aaPredicted RBP12.16□□□□□ -0.46
ZC3H4-201ENST00000253048 KIAA1217Q5T5P2 1943 aa12.16□□□□□ -0.46
ZC3H4-201ENST00000253048 CITED2Q99967 270 aaPredicted RBP12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 BRWD3Q6RI45 1802 aa12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 TRAV8-7A0A075B6U6 113 aa12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 A8MWL6 223 aa12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 DUSP14O95147 198 aaKnown RBP12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 IFI6P09912 130 aa12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 HKR1P10072 659 aa12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 KIR3DL3Q8N743 410 aa12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 CLDND2Q8NHS1 167 aa12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 MCM3APO60318 1980 aa12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 NBR2O15453 112 aa12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 IMMP1LQ96LU5 166 aa12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 WFIKKN1Q96NZ8 548 aa12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 SDF2L1Q9HCN8 221 aa12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 COL5A3P25940 1745 aaPredicted RBP12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 TIMP3P35625 211 aa12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 IGLV3-21P80748 117 aaPredicted RBP12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 C10orf128Q5T292 105 aa12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 VKORC1L1Q8N0U8 176 aa12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 OR51G1Q8NGK1 321 aa12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 OR51M1Q9H341 326 aa12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 LINC00312Q9Y6C7 94 aa12.15□□□□□ -0.46
ZC3H4-201ENST00000253048 ZNF324BQ6AW86 544 aaPredicted RBP12.15□□□□□ -0.47
ZC3H4-201ENST00000253048 XAF1Q6GPH4 301 aa12.15□□□□□ -0.47
ZC3H4-201ENST00000253048 ZP1P60852 638 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 Q0VFX4 171 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 RNF166Q96A37 237 aaPredicted RBP12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 C12orf57Q99622 126 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 EDA2RQ9HAV5 297 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 F5P12259 2224 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 MARCH11A6NNE9 402 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 APCDD1LQ8NCL9 501 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 RGP1Q92546 391 aaPredicted RBP12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 TMEM177Q53S58 311 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 C2orf88Q9BSF0 95 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 PGLYRP1O75594 196 aaPredicted RBP12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 FABP2P12104 132 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 EFNB2P52799 333 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 MFAP2P55001 183 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 RPL39P5Q59GN2 51 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 DOCK5Q9H7D0 1870 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 SPRR3Q9UBC9 169 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 TUBD1Q9UJT1 453 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 TRIP12Q14669 1992 aaPredicted RBP12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 PAX1P15863 534 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 CA7P43166 264 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 PRO1933Q9H354 126 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 MAP1LC3AQ9H492 121 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 AKIP1Q9NQ31 210 aa12.14□□□□□ -0.47
ZC3H4-201ENST00000253048 ATG2BQ96BY7 2078 aa12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 NTN3O00634 580 aaPredicted RBP12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 IL6RP08887 468 aaPredicted RBP12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 SMIM10L1P0DMW3 83 aa12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 FAM90A1Q86YD7 464 aa12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 SMIM10Q96HG1 83 aa12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 HSF4Q9ULV5 492 aa12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 SIRT4Q9Y6E7 314 aaPredicted RBP12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 ZNF25P17030 456 aaPredicted RBP12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 AQP3Q92482 292 aa12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 H3BTX0 84 aa12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 FAM74A3Q4VXF1 159 aa12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 OSR1Q8TAX0 266 aaPredicted RBP12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 NPIPB3Q92617 1050 aa12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 LHX2P50458 406 aa12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 ZNF672Q499Z4 452 aaPredicted RBP12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 KBTBD11-OT1A0A1B0GTJ5 212 aa12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 PITX3O75364 302 aa12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 FGFRL1Q8N441 504 aa12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 DMRTA2Q96SC8 542 aa12.13□□□□□ -0.47
ZC3H4-201ENST00000253048 TRBV7-9A0A0J9YWB2 115 aa12.12□□□□□ -0.47
ZC3H4-201ENST00000253048 K7ENP7 123 aa12.12□□□□□ -0.47
ZC3H4-201ENST00000253048 KLK2P20151 261 aa12.12□□□□□ -0.47
ZC3H4-201ENST00000253048 CRYBA2P53672 197 aa12.12□□□□□ -0.47
ZC3H4-201ENST00000253048 PRB3Q04118 309 aaPredicted RBP12.12□□□□□ -0.47
ZC3H4-201ENST00000253048 UNC119Q13432 240 aa12.12□□□□□ -0.47
ZC3H4-201ENST00000253048 VMO1Q7Z5L0 202 aa12.12□□□□□ -0.47
ZC3H4-201ENST00000253048 ELOA3CA0A087WX78 387 aaPredicted RBP12.12□□□□□ -0.47
ZC3H4-201ENST00000253048 IGHV3-48P01763 117 aa12.12□□□□□ -0.47
ZC3H4-201ENST00000253048 PNRC1Q12796 327 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms