RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 E7EUB6 86 aa17.68■□□□□ 0.42
LSM4-201ENST00000252816 OVOL1O14753 267 aa17.68■□□□□ 0.42
LSM4-201ENST00000252816 MPPED1O15442 326 aa17.68■□□□□ 0.42
LSM4-201ENST00000252816 RCVRNP35243 200 aa17.68■□□□□ 0.42
LSM4-201ENST00000252816 DGCR2P98153 550 aa17.68■□□□□ 0.42
LSM4-201ENST00000252816 AADACL3Q5VUY0 350 aa17.68■□□□□ 0.42
LSM4-201ENST00000252816 OR6F1Q8NGZ6 308 aa17.68■□□□□ 0.42
LSM4-201ENST00000252816 SPIN2AQ99865 258 aa17.68■□□□□ 0.42
LSM4-201ENST00000252816 SPIN2BQ9BPZ2 258 aa17.68■□□□□ 0.42
LSM4-201ENST00000252816 MIXL1Q9H2W2 232 aa17.68■□□□□ 0.42
LSM4-201ENST00000252816 EXTL2Q9UBQ6 330 aa17.68■□□□□ 0.42
LSM4-201ENST00000252816 A0A0G2JLM5 398 aa17.67■□□□□ 0.42
LSM4-201ENST00000252816 A0A1B0GW64 132 aa17.67■□□□□ 0.42
LSM4-201ENST00000252816 HMX3A6NHT5 357 aa17.67■□□□□ 0.42
LSM4-201ENST00000252816 TEX22C9J3V5 150 aa17.67■□□□□ 0.42
LSM4-201ENST00000252816 PRH1P02810 166 aa17.67■□□□□ 0.42
LSM4-201ENST00000252816 IL6RP08887 468 aaPredicted RBP17.67■□□□□ 0.42
LSM4-201ENST00000252816 RNASE12Q5GAN4 147 aaKnown RBP17.67■□□□□ 0.42
LSM4-201ENST00000252816 OR4A47Q6IF82 309 aa17.67■□□□□ 0.42
LSM4-201ENST00000252816 PGLYRP1O75594 196 aaPredicted RBP17.66■□□□□ 0.42
LSM4-201ENST00000252816 HPRT1P00492 218 aa17.66■□□□□ 0.42
LSM4-201ENST00000252816 MYOD1P15172 320 aa17.66■□□□□ 0.42
LSM4-201ENST00000252816 ZNF45Q02386 682 aa17.66■□□□□ 0.42
LSM4-201ENST00000252816 RAB2BQ8WUD1 216 aa17.66■□□□□ 0.42
LSM4-201ENST00000252816 BORCS5Q969J3 196 aa17.66■□□□□ 0.42
LSM4-201ENST00000252816 ABHD1Q96SE0 405 aa17.66■□□□□ 0.42
LSM4-201ENST00000252816 BET1LQ9NYM9 111 aa17.66■□□□□ 0.42
LSM4-201ENST00000252816 ANKRD34BA5PLL1 514 aa17.65■□□□□ 0.42
LSM4-201ENST00000252816 S1PR2O95136 353 aa17.65■□□□□ 0.42
LSM4-201ENST00000252816 RLN1P04808 185 aa17.65■□□□□ 0.42
LSM4-201ENST00000252816 MAS1LP35410 378 aa17.65■□□□□ 0.42
LSM4-201ENST00000252816 RPL27AP46776 148 aaKnown RBP17.65■□□□□ 0.42
LSM4-201ENST00000252816 TAS2R31P59538 309 aa17.65■□□□□ 0.42
LSM4-201ENST00000252816 TSPAN5P62079 268 aa17.65■□□□□ 0.42
LSM4-201ENST00000252816 POU2AF1Q16633 256 aa17.65■□□□□ 0.42
LSM4-201ENST00000252816 TTC9CQ8N5M4 171 aa17.65■□□□□ 0.42
LSM4-201ENST00000252816 OR52I2Q8NH67 350 aa17.65■□□□□ 0.42
LSM4-201ENST00000252816 KLK11Q9UBX7 282 aa17.65■□□□□ 0.42
LSM4-201ENST00000252816 ZMAT5Q9UDW3 170 aaKnown RBP17.65■□□□□ 0.42
LSM4-201ENST00000252816 TRAV3A0A0B4J244 114 aa17.64■□□□□ 0.41
LSM4-201ENST00000252816 CTDSP2O14595 271 aa17.64■□□□□ 0.41
LSM4-201ENST00000252816 ZNF735P0CB33 412 aa17.64■□□□□ 0.41
LSM4-201ENST00000252816 NQO2P16083 231 aa17.64■□□□□ 0.41
LSM4-201ENST00000252816 ECI1P42126 302 aa17.64■□□□□ 0.41
LSM4-201ENST00000252816 RPL5P46777 297 aaKnown RBP17.64■□□□□ 0.41
LSM4-201ENST00000252816 TMBIM6P55061 237 aa17.64■□□□□ 0.41
LSM4-201ENST00000252816 RPL8P62917 257 aaKnown RBP17.64■□□□□ 0.41
LSM4-201ENST00000252816 RHOGP84095 191 aa17.64■□□□□ 0.41
LSM4-201ENST00000252816 DEFB121Q5J5C9 76 aa17.64■□□□□ 0.41
LSM4-201ENST00000252816 ZNF343Q6P1L6 599 aa17.64■□□□□ 0.41
LSM4-201ENST00000252816 C19orf35Q6ZS72 473 aa17.64■□□□□ 0.41
LSM4-201ENST00000252816 LAX1Q8IWV1 398 aa17.64■□□□□ 0.41
LSM4-201ENST00000252816 CD300LFQ8TDQ1 290 aa17.64■□□□□ 0.41
LSM4-201ENST00000252816 USMG5Q96IX5 58 aa17.64■□□□□ 0.41
LSM4-201ENST00000252816 FYTTD1Q96QD9 318 aaKnown RBP17.64■□□□□ 0.41
LSM4-201ENST00000252816 AIFM2Q9BRQ8 373 aa17.64■□□□□ 0.41
LSM4-201ENST00000252816 PLEKHA2Q9HB19 425 aa17.64■□□□□ 0.41
LSM4-201ENST00000252816 RANGRFQ9HD47 186 aaPredicted RBP17.64■□□□□ 0.41
LSM4-201ENST00000252816 HRASLSQ9HDD0 168 aa17.64■□□□□ 0.41
LSM4-201ENST00000252816 AKIP1Q9NQ31 210 aa17.64■□□□□ 0.41
LSM4-201ENST00000252816 TRBV9A0A0B4J1U6 114 aa17.63■□□□□ 0.41
LSM4-201ENST00000252816 M0QYG6 137 aa17.63■□□□□ 0.41
LSM4-201ENST00000252816 GPR31O00270 319 aa17.63■□□□□ 0.41
LSM4-201ENST00000252816 TRBV12-3P01733 135 aa17.63■□□□□ 0.41
LSM4-201ENST00000252816 HLA-GP17693 338 aa17.63■□□□□ 0.41
LSM4-201ENST00000252816 INSL3P51460 131 aa17.63■□□□□ 0.41
LSM4-201ENST00000252816 VAX1Q5SQQ9 334 aa17.63■□□□□ 0.41
LSM4-201ENST00000252816 OR4A5Q8NH83 315 aa17.63■□□□□ 0.41
LSM4-201ENST00000252816 DYNC2LI1Q8TCX1 351 aa17.63■□□□□ 0.41
LSM4-201ENST00000252816 PRR25Q96S07 402 aa17.63■□□□□ 0.41
LSM4-201ENST00000252816 CGB1A6NKQ9 187 aa17.62■□□□□ 0.41
LSM4-201ENST00000252816 RGS5O15539 181 aa17.62■□□□□ 0.41
LSM4-201ENST00000252816 TPPPO94811 219 aa17.62■□□□□ 0.41
LSM4-201ENST00000252816 RPA2P15927 270 aa17.62■□□□□ 0.41
LSM4-201ENST00000252816 F2RP25116 425 aa17.62■□□□□ 0.41
LSM4-201ENST00000252816 PHLDA2Q53GA4 152 aa17.62■□□□□ 0.41
LSM4-201ENST00000252816 ACSM6Q6P461 480 aa17.62■□□□□ 0.41
LSM4-201ENST00000252816 ZNF429Q86V71 674 aa17.62■□□□□ 0.41
LSM4-201ENST00000252816 CMTM1Q8IZ96 169 aa17.62■□□□□ 0.41
LSM4-201ENST00000252816 FCAMRQ8WWV6 532 aa17.62■□□□□ 0.41
LSM4-201ENST00000252816 DGCR14Q96DF8 476 aaKnown RBP17.62■□□□□ 0.41
LSM4-201ENST00000252816 BCL7BQ9BQE9 202 aa17.62■□□□□ 0.41
LSM4-201ENST00000252816 SLC2A9Q9NRM0 540 aa17.62■□□□□ 0.41
LSM4-201ENST00000252816 TMEM140Q9NV12 185 aa17.62■□□□□ 0.41
LSM4-201ENST00000252816 MTFP1Q9UDX5 166 aa17.62■□□□□ 0.41
LSM4-201ENST00000252816 UPK2O00526 184 aa17.61■□□□□ 0.41
LSM4-201ENST00000252816 SAP30O75446 220 aa17.61■□□□□ 0.41
LSM4-201ENST00000252816 AREGP15514 252 aa17.61■□□□□ 0.41
LSM4-201ENST00000252816 ZNF585BQ52M93 769 aa17.61■□□□□ 0.41
LSM4-201ENST00000252816 DMBX1Q8NFW5 382 aa17.61■□□□□ 0.41
LSM4-201ENST00000252816 RSRP1Q9BUV0 290 aa17.61■□□□□ 0.41
LSM4-201ENST00000252816 COMMD9Q9P000 198 aa17.61■□□□□ 0.41
LSM4-201ENST00000252816 CCDC59Q9P031 241 aaKnown RBP17.61■□□□□ 0.41
LSM4-201ENST00000252816 PEF1Q9UBV8 284 aaKnown RBP17.61■□□□□ 0.41
LSM4-201ENST00000252816 ZNF257Q9Y2Q1 563 aa17.61■□□□□ 0.41
LSM4-201ENST00000252816 FAM223BA6NKX1 122 aa17.6■□□□□ 0.41
LSM4-201ENST00000252816 NPIPB5A8MRT5 1133 aa17.6■□□□□ 0.41
LSM4-201ENST00000252816 ZP3P21754 424 aa17.6■□□□□ 0.41
LSM4-201ENST00000252816 LPAR6P43657 344 aa17.6■□□□□ 0.41
LSM4-201ENST00000252816 SLC25A42Q86VD7 318 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms