RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 RND1Q92730 232 aa7.56□□□□□ -1.2
SYDE2-201ENST00000234668 HSD17B10Q99714 261 aaKnown RBP7.56□□□□□ -1.2
SYDE2-201ENST00000234668 SIRT7Q9NRC8 400 aa7.56□□□□□ -1.2
SYDE2-201ENST00000234668 A0A1W2PPV4 95 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 H7BYZ3 331 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 TM4SF5O14894 197 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 GATA2P23769 480 aaPredicted RBP7.55□□□□□ -1.2
SYDE2-201ENST00000234668 CD82P27701 267 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 GALR1P47211 349 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 LOXL3P58215 753 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 P2RY6Q15077 328 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 FAM209BQ5JX69 171 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 PIP4P1Q86T03 277 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 Q8N7P7 452 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 RHOVQ96L33 236 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 S1PR3Q99500 378 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 MRPL37Q9BZE1 423 aaKnown RBP7.55□□□□□ -1.2
SYDE2-201ENST00000234668 TMEM140Q9NV12 185 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 NAT8Q9UHE5 227 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 FAM215AQ9Y5M1 114 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 AKAP6Q13023 2319 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 A0A1B0GUS0 222 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 FOXH1O75593 365 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 KBTBD11O94819 623 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 IGHV3-48P01763 117 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 C1QTNF9P0C862 333 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 ASPHD1Q5U4P2 390 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 HIST3H2BBQ8N257 126 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 OR13D1Q8NGV5 346 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 PRR7Q8TB68 274 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 IFI27L2Q9H2X8 130 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 OR51M1Q9H341 326 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 CALYQ9NYX4 217 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 COL12A1Q99715 3063 aa7.55□□□□□ -1.2
SYDE2-201ENST00000234668 CXorf65A6NEN9 183 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 WNT2P09544 360 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 REG1BP48304 166 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 THBS3P49746 956 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 KLF3P57682 345 aaPredicted RBP7.54□□□□□ -1.2
SYDE2-201ENST00000234668 PDLIM3Q53GG5 364 aaPredicted RBP7.54□□□□□ -1.2
SYDE2-201ENST00000234668 TREML4Q6UXN2 200 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 ZNF66Q6ZN08 573 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 ZADH2Q8N4Q0 377 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 NAV3Q8IVL0 2385 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 IGF2RP11717 2491 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 SAA2-SAA4A0A096LPE2 208 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 AHRRA9YTQ3 701 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 PFN1P07737 140 aaKnown RBP7.54□□□□□ -1.2
SYDE2-201ENST00000234668 ADH4P08319 380 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 SAA2P0DJI9 122 aaPredicted RBP7.54□□□□□ -1.2
SYDE2-201ENST00000234668 ARL14EPLP0DKL9 152 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 GNB1P62873 340 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 MBNL2Q5VZF2 373 aaKnown RBP7.54□□□□□ -1.2
SYDE2-201ENST00000234668 FAM90A1Q86YD7 464 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 FUT9Q9Y231 359 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 SPTAN1Q13813 2472 aaKnown RBP7.54□□□□□ -1.2
SYDE2-201ENST00000234668 CUL9Q8IWT3 2517 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 PIGBOS1A0A0B4J2F0 54 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 MGST3O14880 152 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 HPRT1P00492 218 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 IGKV1-16P04430 117 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 ERVK-16P61578 105 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 RELBQ01201 579 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 PNRC1Q12796 327 aaPredicted RBP7.54□□□□□ -1.2
SYDE2-201ENST00000234668 GAMTQ14353 236 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 ATP6V1FQ16864 119 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 C17orf58Q2M2W7 97 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 CYP2G1PQ6ZSU1 146 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 OR10A7Q8NGE5 316 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 CIB3Q96Q77 187 aaPredicted RBP7.54□□□□□ -1.2
SYDE2-201ENST00000234668 P2RX4Q99571 388 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 MGST2Q99735 147 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 SEPSECSQ9HD40 501 aaKnown RBP7.54□□□□□ -1.2
SYDE2-201ENST00000234668 GFOD1Q9NXC2 390 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 TCF19Q9Y242 345 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 COL6A6A6NMZ7 2263 aa7.54□□□□□ -1.2
SYDE2-201ENST00000234668 B4DEV8 164 aa7.53□□□□□ -1.2
SYDE2-201ENST00000234668 SEC14L6B5MCN3 397 aa7.53□□□□□ -1.2
SYDE2-201ENST00000234668 KLK10O43240 276 aa7.53□□□□□ -1.2
SYDE2-201ENST00000234668 GFRA3O60609 400 aa7.53□□□□□ -1.2
SYDE2-201ENST00000234668 IGHV2-70P01814 119 aa7.53□□□□□ -1.2
SYDE2-201ENST00000234668 NDUFB7P17568 137 aa7.53□□□□□ -1.2
SYDE2-201ENST00000234668 RND2P52198 227 aa7.53□□□□□ -1.2
SYDE2-201ENST00000234668 DLX1P56177 255 aa7.53□□□□□ -1.2
SYDE2-201ENST00000234668 HTD2P86397 168 aa7.53□□□□□ -1.2
SYDE2-201ENST00000234668 FAM78BQ5VT40 261 aa7.53□□□□□ -1.2
SYDE2-201ENST00000234668 IGFL2Q6UWQ7 119 aa7.53□□□□□ -1.2
SYDE2-201ENST00000234668 UNQ6494/PRO21346Q6UXR6 183 aa7.53□□□□□ -1.2
SYDE2-201ENST00000234668 NEIL1Q96FI4 390 aaPredicted RBP7.53□□□□□ -1.2
SYDE2-201ENST00000234668 PFDN5Q99471 154 aa7.53□□□□□ -1.2
SYDE2-201ENST00000234668 TCEAL7Q9BRU2 100 aa7.53□□□□□ -1.2
SYDE2-201ENST00000234668 HIPK2Q9H2X6 1198 aa7.53□□□□□ -1.2
SYDE2-201ENST00000234668 TANC2Q9HCD6 1990 aa7.53□□□□□ -1.2
SYDE2-201ENST00000234668 TMPRSS2O15393 492 aa7.53□□□□□ -1.2
SYDE2-201ENST00000234668 GNB2P62879 340 aa7.53□□□□□ -1.2
SYDE2-201ENST00000234668 TNFAIP6P98066 277 aaPredicted RBP7.53□□□□□ -1.2
SYDE2-201ENST00000234668 ACOT6Q3I5F7 207 aaPredicted RBP7.53□□□□□ -1.2
SYDE2-201ENST00000234668 CENPVQ7Z7K6 275 aaPredicted RBP7.53□□□□□ -1.2
SYDE2-201ENST00000234668 WFDC8Q8IUA0 241 aa7.53□□□□□ -1.2
SYDE2-201ENST00000234668 C1orf162Q8NEQ5 155 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms