RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 C7orf69Q9H7B7 122 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 SLC52A3Q9NQ40 469 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 GPX1P07203 203 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 ARL14EPLP0DKL9 152 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 CRYBB3P26998 211 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 TTTY12Q9BZ98 90 aa9.59□□□□□ -0.87
MSH6-201ENST00000234420 SCN5AQ14524 2016 aa9.59□□□□□ -0.88
MSH6-201ENST00000234420 CLDN14O95500 239 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 EGR1P18146 543 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 TRBV9A0A0B4J1U6 114 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 A0A1B0GTL3 188 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 FAM106AQ4KMX7 169 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 FAM110DQ8TAY7 271 aaPredicted RBP9.58□□□□□ -0.88
MSH6-201ENST00000234420 ASPDHA6ND91 283 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 J3QR06 171 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 S1PR2O95136 353 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 P2RY4P51582 365 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 ZNF714Q96N38 554 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 NPVFQ9HCQ7 196 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 HYPMO75409 117 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 TNFRSF6BO95407 300 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 OR9G4Q8NGQ1 327 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 TSC2P49815 1807 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 CRPP02741 224 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 ACSF3Q4G176 576 aaPredicted RBP9.58□□□□□ -0.88
MSH6-201ENST00000234420 ANK1P16157 1881 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 APOHP02749 345 aaPredicted RBP9.58□□□□□ -0.88
MSH6-201ENST00000234420 SAMD5Q5TGI4 173 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 PEAR1Q5VY43 1037 aaPredicted RBP9.58□□□□□ -0.88
MSH6-201ENST00000234420 ALKAL1Q6UXT8 129 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 PAQR9Q6ZVX9 377 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 TCF23Q7RTU1 214 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 ZNF488Q96MN9 340 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 OR51B2Q9Y5P1 312 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 PAPPA2Q9BXP8 1791 aa9.58□□□□□ -0.88
MSH6-201ENST00000234420 SPTBN1Q01082 2364 aaKnown RBP9.57□□□□□ -0.88
MSH6-201ENST00000234420 H3BTX0 84 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 HOXA5P20719 270 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 OR8B12Q8NGG6 310 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 OR4D11Q8NGI4 311 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 GP6Q9HCN6 339 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 SIGLEC1Q9BZZ2 1709 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 COL6A6A6NMZ7 2263 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 SPINK8P0C7L1 97 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 ESDP10768 282 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 SNRPD3P62318 126 aaKnown RBP9.57□□□□□ -0.88
MSH6-201ENST00000234420 PIGYQ3MUY2 71 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 FAM89BQ8N5H3 189 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 OR6X1Q8NH79 312 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 A0A0U1RQV5 110 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 LOC390937A0A1W2PQ73 354 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 DLEU1O43261 78 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 HOXA3O43365 443 aaPredicted RBP9.57□□□□□ -0.88
MSH6-201ENST00000234420 CX3CL1P78423 397 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 IGKV6D-21A0A0A0MT36 114 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 A0A1W2PQM1 296 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 ZIC3O60481 467 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 IGHV3-11P01762 117 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 TRGV3P03979 118 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 PRR35P0CG20 571 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 LHX2P50458 406 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 OR4X2Q8NGF9 303 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 ASB10Q8WXI3 467 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 KIR2DL4Q99706 377 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 RNASE4P34096 147 aaKnown RBP9.57□□□□□ -0.88
MSH6-201ENST00000234420 FAM53BQ14153 422 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 NHLRC3Q5JS37 347 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 PRNDQ9UKY0 176 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 RNF115Q9Y4L5 304 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 MYLKQ15746 1914 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 LRP6O75581 1613 aa9.57□□□□□ -0.88
MSH6-201ENST00000234420 KBTBD11-OT1A0A1B0GTJ5 212 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 HOXB1P14653 301 aaPredicted RBP9.56□□□□□ -0.88
MSH6-201ENST00000234420 EFNB2P52799 333 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 FXYD7P58549 80 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 MIC13Q5XKP0 118 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 MRM2Q9UI43 246 aaKnown RBP9.56□□□□□ -0.88
MSH6-201ENST00000234420 COL3A1P02461 1466 aaPredicted RBP9.56□□□□□ -0.88
MSH6-201ENST00000234420 ZNF688P0C7X2 276 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 SSBP2P81877 361 aaPredicted RBP9.56□□□□□ -0.88
MSH6-201ENST00000234420 CNRIP1Q96F85 164 aaPredicted RBP9.56□□□□□ -0.88
MSH6-201ENST00000234420 LINC00615Q96LM1 132 aaPredicted RBP9.56□□□□□ -0.88
MSH6-201ENST00000234420 NKX2-2O95096 273 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 C9orf153Q5TBE3 101 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 DMKNQ6E0U4 476 aaPredicted RBP9.56□□□□□ -0.88
MSH6-201ENST00000234420 CCDC144NLQ6NUI1 221 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 SPRED2Q7Z698 418 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 TMEM252Q8N6L7 170 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 OR11H4Q8NGC9 324 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 KLK13Q9UKR3 277 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 TRIOBPQ9H2D6 2365 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 IGKV6-21A0A0C4DH24 114 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 C7orf66A4D0T2 115 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 CD69Q07108 199 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 ZNF585BQ52M93 769 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 S100A7L2Q5SY68 101 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 TUBGCP6Q96RT7 1819 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 CEACAM18A8MTB9 384 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 DRD3P35462 400 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 P2RY6Q15077 328 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms