RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 FAM110AQ9BQ89 295 aa10.89□□□□□ -0.67
MSH2-201ENST00000233146 DUSP23Q9BVJ7 150 aa10.89□□□□□ -0.67
MSH2-201ENST00000233146 SAP30LQ9HAJ7 183 aa10.89□□□□□ -0.67
MSH2-201ENST00000233146 C19orf25Q9UFG5 118 aaPredicted RBP10.89□□□□□ -0.67
MSH2-201ENST00000233146 PSG8Q9UQ74 426 aa10.89□□□□□ -0.67
MSH2-201ENST00000233146 SMIM27A0A1W2PRY6 76 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 FAM90A26D6RGX4 464 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.88□□□□□ -0.67
MSH2-201ENST00000233146 LAMTOR5O43504 91 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 APOA2P02652 100 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 ADH5P11766 374 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 PVRP15151 417 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 GATA3P23771 443 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 FABP6P51161 128 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 TCL1AP56279 114 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 HNRNPA1L2Q32P51 320 aaKnown RBP10.88□□□□□ -0.67
MSH2-201ENST00000233146 SPATA31B1PQ5VZV4 182 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 PRR22Q8IZ63 422 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 TPRX1Q8N7U7 411 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 NEU4Q8WWR8 484 aaPredicted RBP10.88□□□□□ -0.67
MSH2-201ENST00000233146 CLDN23Q96B33 292 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 URB1-AS1Q96HZ7 61 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 OSTCQ9NRP0 149 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 FGF21Q9NSA1 209 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 MED12LQ86YW9 2145 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 J3QR89 54 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 CLDN14O95500 239 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 DAZAP2Q15038 168 aaPredicted RBP10.88□□□□□ -0.67
MSH2-201ENST00000233146 INO80CQ6PI98 192 aaPredicted RBP10.88□□□□□ -0.67
MSH2-201ENST00000233146 TMEM251Q8N6I4 163 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 TSTD1Q8NFU3 115 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 PRTFDC1Q9NRG1 225 aa10.88□□□□□ -0.67
MSH2-201ENST00000233146 PHPT1Q9NRX4 125 aaPredicted RBP10.88□□□□□ -0.67
MSH2-201ENST00000233146 YTHDF2Q9Y5A9 579 aaKnown RBP10.88□□□□□ -0.67
MSH2-201ENST00000233146 HBZP02008 142 aa10.87□□□□□ -0.67
MSH2-201ENST00000233146 ARL14EPLP0DKL9 152 aa10.87□□□□□ -0.67
MSH2-201ENST00000233146 CYB561P49447 251 aa10.87□□□□□ -0.67
MSH2-201ENST00000233146 LINC00173Q6ZV60 143 aa10.87□□□□□ -0.67
MSH2-201ENST00000233146 WIPF2Q8TF74 440 aaPredicted RBP10.87□□□□□ -0.67
MSH2-201ENST00000233146 SLC17A4Q9Y2C5 497 aa10.87□□□□□ -0.67
MSH2-201ENST00000233146 TNRC6AQ8NDV7 1962 aaKnown RBP10.87□□□□□ -0.67
MSH2-201ENST00000233146 IGKV1-6A0A0C4DH72 117 aa10.87□□□□□ -0.67
MSH2-201ENST00000233146 HERV-K104P63124 156 aa10.87□□□□□ -0.67
MSH2-201ENST00000233146 TBC1D29Q9UFV1 150 aa10.87□□□□□ -0.67
MSH2-201ENST00000233146 ZNF257Q9Y2Q1 563 aa10.87□□□□□ -0.67
MSH2-201ENST00000233146 EDDM13A0A1B0GTR0 161 aa10.87□□□□□ -0.67
MSH2-201ENST00000233146 A0A1W2PPV4 95 aa10.87□□□□□ -0.67
MSH2-201ENST00000233146 ISLRO14498 428 aa10.87□□□□□ -0.67
MSH2-201ENST00000233146 ADAMTSL5Q6ZMM2 481 aa10.87□□□□□ -0.67
MSH2-201ENST00000233146 C19orf24Q9BVV8 132 aa10.87□□□□□ -0.67
MSH2-201ENST00000233146 RNASE7Q9H1E1 156 aaKnown RBP10.87□□□□□ -0.67
MSH2-201ENST00000233146 CLCF1Q9UBD9 225 aa10.87□□□□□ -0.67
MSH2-201ENST00000233146 A0A1W2PQD3 144 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 IZUMO1RA6ND01 250 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 RRHO14718 337 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 OR7C1O76099 320 aaPredicted RBP10.86□□□□□ -0.67
MSH2-201ENST00000233146 STAG3L2P0CL84 134 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 SLC25A47Q6Q0C1 308 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 RASL11AQ6T310 242 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 CRIPAKQ8N1N5 446 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 CACNG8Q8WXS5 425 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 NUDT22Q9BRQ3 303 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 ZNF331Q9NQX6 463 aaPredicted RBP10.86□□□□□ -0.67
MSH2-201ENST00000233146 SPANXB1Q9NS25 103 aaPredicted RBP10.86□□□□□ -0.67
MSH2-201ENST00000233146 CELA3AP09093 270 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 FABP2P12104 132 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 RBM11P57052 281 aaKnown RBP10.86□□□□□ -0.67
MSH2-201ENST00000233146 CLRN1P58418 232 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 RPL8P62917 257 aaKnown RBP10.86□□□□□ -0.67
MSH2-201ENST00000233146 PLCXD2Q0VAA5 305 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 FXYD3Q14802 87 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 ZNF585BQ52M93 769 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 RD3Q7Z3Z2 195 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 STPG3Q8N7X2 389 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 TRBV7-9A0A0J9YWB2 115 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 SH2D7A6NKC9 451 aaPredicted RBP10.86□□□□□ -0.67
MSH2-201ENST00000233146 VWC2LB2RUY7 222 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 F5H5K5 113 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 H3BMH7 237 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 J3KRW8 73 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 OR10G6Q8NH81 332 aa10.86□□□□□ -0.67
MSH2-201ENST00000233146 ZNF418Q8TF45 676 aaPredicted RBP10.86□□□□□ -0.67
MSH2-201ENST00000233146 BRI3O95415 125 aa10.85□□□□□ -0.67
MSH2-201ENST00000233146 CXorf1O96002 111 aa10.85□□□□□ -0.67
MSH2-201ENST00000233146 NRN1LQ496H8 165 aa10.85□□□□□ -0.67
MSH2-201ENST00000233146 C5orf30Q96GV9 206 aa10.85□□□□□ -0.67
MSH2-201ENST00000233146 MS4A5Q9H3V2 200 aa10.85□□□□□ -0.67
MSH2-201ENST00000233146 OR2W1Q9Y3N9 320 aa10.85□□□□□ -0.67
MSH2-201ENST00000233146 FRG2CA6NGY1 282 aa10.85□□□□□ -0.67
MSH2-201ENST00000233146 RSPO4Q2I0M5 234 aaPredicted RBP10.85□□□□□ -0.67
MSH2-201ENST00000233146 RSPO1Q2MKA7 263 aaPredicted RBP10.85□□□□□ -0.67
MSH2-201ENST00000233146 SNAI2O43623 268 aa10.84□□□□□ -0.67
MSH2-201ENST00000233146 OR2J3O76001 311 aa10.84□□□□□ -0.67
MSH2-201ENST00000233146 GDF5OSQ5U4N7 250 aa10.84□□□□□ -0.67
MSH2-201ENST00000233146 RAB37Q96AX2 223 aa10.84□□□□□ -0.67
MSH2-201ENST00000233146 SPAG8Q99932 426 aaPredicted RBP10.84□□□□□ -0.67
MSH2-201ENST00000233146 HILPDAQ9Y5L2 63 aa10.84□□□□□ -0.67
MSH2-201ENST00000233146 LHX8Q68G74 356 aa10.84□□□□□ -0.67
MSH2-201ENST00000233146 PCSK4Q6UW60 755 aa10.84□□□□□ -0.67
MSH2-201ENST00000233146 DOLPP1Q86YN1 238 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms