RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 TMEM68Q96MH6 324 aa9.75□□□□□ -0.85
TNFAIP1-201ENST00000226225 ATP5SQ99766 215 aa9.75□□□□□ -0.85
TNFAIP1-201ENST00000226225 C2orf88Q9BSF0 95 aa9.75□□□□□ -0.85
TNFAIP1-201ENST00000226225 TMEM204Q9BSN7 226 aa9.75□□□□□ -0.85
TNFAIP1-201ENST00000226225 TMEM30CPA0ZSE6 113 aa9.75□□□□□ -0.85
TNFAIP1-201ENST00000226225 ZNF737O75373 536 aa9.75□□□□□ -0.85
TNFAIP1-201ENST00000226225 RBMXL2O75526 392 aaKnown RBP9.75□□□□□ -0.85
TNFAIP1-201ENST00000226225 MAS1LP35410 378 aa9.75□□□□□ -0.85
TNFAIP1-201ENST00000226225 SPINK9Q5DT21 86 aa9.75□□□□□ -0.85
TNFAIP1-201ENST00000226225 C20orf204Q6ZNR8 217 aa9.75□□□□□ -0.85
TNFAIP1-201ENST00000226225 BBC3Q96PG8 261 aaPredicted RBP9.75□□□□□ -0.85
TNFAIP1-201ENST00000226225 SPIN2AQ99865 258 aa9.75□□□□□ -0.85
TNFAIP1-201ENST00000226225 SPIN2BQ9BPZ2 258 aa9.75□□□□□ -0.85
TNFAIP1-201ENST00000226225 SLC39A9Q9NUM3 307 aa9.75□□□□□ -0.85
TNFAIP1-201ENST00000226225 FLNCQ14315 2725 aa9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 IGLV3-9A0A075B6K5 115 aa9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 MAP1LC3B2A6NCE7 125 aa9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 SHISA9B4DS77 424 aa9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 S100GP29377 79 aa9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 TAS2R30P59541 319 aa9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 UBE2G2P60604 165 aa9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 ODF3L1Q8IXM7 274 aa9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 C11orf53Q8IXP5 236 aa9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 MAP1LC3BQ9GZQ8 125 aa9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 RIMS4Q9H426 269 aaPredicted RBP9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 GRIFINA4D1Z8 144 aa9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 RCC1LQ96I51 464 aaKnown RBP9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 SDF2L1Q9HCN8 221 aa9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 PGPEP1LA6NFU8 196 aa9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 B9A039 149 aa9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 CEACAM6P40199 344 aa9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 ZNF726P1Q15940 193 aa9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 ZNF808Q8N4W9 903 aaPredicted RBP9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 FAM216BQ8N7L0 139 aa9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 NEU1Q99519 415 aa9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 CACNG5Q9UF02 275 aa9.74□□□□□ -0.85
TNFAIP1-201ENST00000226225 FAM90A10PA6NDY2 464 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 FAM90A18PA6NE21 464 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 FAM90A16PA6NEW6 464 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 FAM90A20PA6NIJ5 464 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 FAM90A8PA6NJQ4 464 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 FAM90A7PA6NKC0 464 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 FAM90A22PA8MWA6 464 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 FAM90A12PA8MX19 464 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 FAM90A5PA8MXJ8 464 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 FAM90A23PA8MXZ1 464 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 OPN1MWP04001 364 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 NPSP0C0P6 89 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 FAM90A15PP0C7V4 464 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 FAM90A13PP0C7W8 464 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 FAM90A14PP0C7W9 464 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 FAM90A24PP0C7X0 464 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 OPN1MW2P0DN77 364 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 OPN1MW3P0DN78 364 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 TFPI2P48307 235 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 BSXQ3C1V8 233 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 TMEM256Q8N2U0 113 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 ITLN2Q8WWU7 325 aaPredicted RBP9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 FAM234AQ9H0X4 552 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 POLQO75417 2590 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 CDKN1AP38936 164 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 ARL16Q0P5N6 197 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 FAM78BQ5VT40 261 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 GALMQ96C23 342 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 PATZ1Q9HBE1 687 aaKnown RBP9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 PAM16Q9Y3D7 125 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 BSNQ9UPA5 3926 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 MALRD1Q5VYJ5 2156 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 PPIAL4EA0A075B759 164 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 PPIAL4DF5H284 164 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 SPINT2O43291 252 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 TUSC2O75896 110 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 CDS2O95674 445 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 PPIAL4FP0DN26 164 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 SSTR5P35346 364 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 TMEM241Q24JQ0 296 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 OR1A1Q9P1Q5 309 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 PPIAL4AQ9Y536 164 aa9.73□□□□□ -0.85
TNFAIP1-201ENST00000226225 FASNP49327 2511 aaKnown RBP9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 NKX6-3A6NJ46 265 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 SRRM5B3KS81 715 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 C3orf36Q3SXR2 165 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 TOMM20LQ6UXN7 152 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 LINC00596Q86U02 117 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 CD177Q8N6Q3 437 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 OR5R1Q8NH85 324 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 OR1L1Q8NH94 360 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 FKBP11Q9NYL4 201 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 PSENENQ9NZ42 101 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 TRAV38-1A0A0B4J264 116 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 IGHV1-69-2A0A0G2JMI3 117 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 ZNF320A2RRD8 509 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 M0R143 59 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 ZNF146Q15072 292 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 Q6P435 159 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 TCF23Q7RTU1 214 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 FAM90A1Q86YD7 464 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 TMEM18Q96B42 140 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 GPR146Q96CH1 333 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 RAB1BQ9H0U4 201 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms