RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 RNF7Q9UBF6 113 aa18.35■□□□□ 0.53
CCDC9-201ENST00000221922 C17orf112F2Z3M2 114 aa18.35■□□□□ 0.53
CCDC9-201ENST00000221922 HPRT1P00492 218 aa18.35■□□□□ 0.53
CCDC9-201ENST00000221922 EDDM3BP56851 147 aa18.35■□□□□ 0.53
CCDC9-201ENST00000221922 Q8N7P7 452 aa18.35■□□□□ 0.53
CCDC9-201ENST00000221922 ZNRF1Q8ND25 227 aa18.35■□□□□ 0.53
CCDC9-201ENST00000221922 IL19Q9UHD0 177 aa18.35■□□□□ 0.53
CCDC9-201ENST00000221922 PTPRZ1P23471 2315 aaPredicted RBP18.34■□□□□ 0.53
CCDC9-201ENST00000221922 C15orf62A8K5M9 175 aa18.34■□□□□ 0.53
CCDC9-201ENST00000221922 ITGB1BP1O14713 200 aa18.34■□□□□ 0.53
CCDC9-201ENST00000221922 RBFOX2O43251 390 aaKnown RBP eCLIP18.34■□□□□ 0.53
CCDC9-201ENST00000221922 FABP4P15090 132 aa18.34■□□□□ 0.53
CCDC9-201ENST00000221922 TNFSF4P23510 183 aa18.34■□□□□ 0.53
CCDC9-201ENST00000221922 LOXL3P58215 753 aa18.34■□□□□ 0.53
CCDC9-201ENST00000221922 LINC00205P59089 165 aa18.34■□□□□ 0.53
CCDC9-201ENST00000221922 NUP37Q8NFH4 326 aa18.34■□□□□ 0.53
CCDC9-201ENST00000221922 PFDN5Q99471 154 aa18.34■□□□□ 0.53
CCDC9-201ENST00000221922 CALYQ9NYX4 217 aa18.34■□□□□ 0.53
CCDC9-201ENST00000221922 H7BYZ3 331 aa18.34■□□□□ 0.53
CCDC9-201ENST00000221922 KIR2DS2P43631 304 aa18.34■□□□□ 0.53
CCDC9-201ENST00000221922 TNFAIP6P98066 277 aaPredicted RBP18.34■□□□□ 0.53
CCDC9-201ENST00000221922 ANAPC16Q96DE5 110 aa18.34■□□□□ 0.53
CCDC9-201ENST00000221922 NEIL1Q96FI4 390 aaPredicted RBP18.34■□□□□ 0.53
CCDC9-201ENST00000221922 SMCO3A2RU48 225 aa18.33■□□□□ 0.52
CCDC9-201ENST00000221922 C16orf97H3BN30 126 aa18.33■□□□□ 0.52
CCDC9-201ENST00000221922 VENTXO95231 258 aa18.33■□□□□ 0.52
CCDC9-201ENST00000221922 GALR1P47211 349 aa18.33■□□□□ 0.52
CCDC9-201ENST00000221922 RAB7AP51149 207 aa18.33■□□□□ 0.52
CCDC9-201ENST00000221922 RPS16P62249 146 aaKnown RBP18.33■□□□□ 0.52
CCDC9-201ENST00000221922 TMEM249Q2WGJ8 235 aa18.33■□□□□ 0.52
CCDC9-201ENST00000221922 HIST1H2BLQ99880 126 aa18.33■□□□□ 0.52
CCDC9-201ENST00000221922 QTRT1Q9BXR0 403 aaKnown RBP18.33■□□□□ 0.52
CCDC9-201ENST00000221922 WDR83OSQ9Y284 106 aa18.33■□□□□ 0.52
CCDC9-201ENST00000221922 LAMA5O15230 3695 aa18.33■□□□□ 0.52
CCDC9-201ENST00000221922 HCFC1P51610 2035 aa18.33■□□□□ 0.52
CCDC9-201ENST00000221922 M0R1X1 148 aa18.32■□□□□ 0.52
CCDC9-201ENST00000221922 PAGE4O60829 102 aa18.32■□□□□ 0.52
CCDC9-201ENST00000221922 FCGR3BO75015 233 aa18.32■□□□□ 0.52
CCDC9-201ENST00000221922 TLE1Q04724 770 aa18.32■□□□□ 0.52
CCDC9-201ENST00000221922 ACOT6Q3I5F7 207 aaPredicted RBP18.32■□□□□ 0.52
CCDC9-201ENST00000221922 SPINK9Q5DT21 86 aa18.32■□□□□ 0.52
CCDC9-201ENST00000221922 TMEM183AQ8IXX5 376 aa18.32■□□□□ 0.52
CCDC9-201ENST00000221922 SDSLQ96GA7 329 aa18.32■□□□□ 0.52
CCDC9-201ENST00000221922 OR5B12Q96R08 314 aa18.32■□□□□ 0.52
CCDC9-201ENST00000221922 JKAMPQ9P055 326 aa18.32■□□□□ 0.52
CCDC9-201ENST00000221922 GAB2Q9UQC2 676 aa18.32■□□□□ 0.52
CCDC9-201ENST00000221922 DSCAML1Q8TD84 2053 aa18.32■□□□□ 0.52
CCDC9-201ENST00000221922 TANC2Q9HCD6 1990 aa18.32■□□□□ 0.52
CCDC9-201ENST00000221922 DSCAMO60469 2012 aa18.32■□□□□ 0.52
CCDC9-201ENST00000221922 PROP1O75360 226 aa18.32■□□□□ 0.52
CCDC9-201ENST00000221922 RD3LP0DJH9 198 aa18.32■□□□□ 0.52
CCDC9-201ENST00000221922 TMEM108Q6UXF1 575 aa18.32■□□□□ 0.52
CCDC9-201ENST00000221922 PACRGQ96M98 296 aaPredicted RBP18.32■□□□□ 0.52
CCDC9-201ENST00000221922 IFI27L2Q9H2X8 130 aa18.32■□□□□ 0.52
CCDC9-201ENST00000221922 GCM1Q9NP62 436 aa18.32■□□□□ 0.52
CCDC9-201ENST00000221922 ACACAQ13085 2346 aa18.31■□□□□ 0.52
CCDC9-201ENST00000221922 HRASP01112 189 aa18.31■□□□□ 0.52
CCDC9-201ENST00000221922 IGHV1-46P01743 117 aa18.31■□□□□ 0.52
CCDC9-201ENST00000221922 CGB3P0DN86 165 aa18.31■□□□□ 0.52
CCDC9-201ENST00000221922 CGB7P0DN87 165 aa18.31■□□□□ 0.52
CCDC9-201ENST00000221922 CDC34P49427 236 aaPredicted RBP18.31■□□□□ 0.52
CCDC9-201ENST00000221922 ERVK-16P61578 105 aa18.31■□□□□ 0.52
CCDC9-201ENST00000221922 COA6Q5JTJ3 125 aaKnown RBP18.31■□□□□ 0.52
CCDC9-201ENST00000221922 C9orf152Q5JTZ5 239 aa18.31■□□□□ 0.52
CCDC9-201ENST00000221922 SSX8Q7RTT4 187 aa18.31■□□□□ 0.52
CCDC9-201ENST00000221922 GFOD1Q9NXC2 390 aa18.31■□□□□ 0.52
CCDC9-201ENST00000221922 MSRB2Q9Y3D2 182 aa18.31■□□□□ 0.52
CCDC9-201ENST00000221922 SOX15O60248 233 aa18.3■□□□□ 0.52
CCDC9-201ENST00000221922 GYPAP02724 150 aa18.3■□□□□ 0.52
CCDC9-201ENST00000221922 OR9G9P0C7N8 305 aa18.3■□□□□ 0.52
CCDC9-201ENST00000221922 PRAMEF5Q5TYX0 476 aa18.3■□□□□ 0.52
CCDC9-201ENST00000221922 STUMQ69YW2 141 aa18.3■□□□□ 0.52
CCDC9-201ENST00000221922 NECAP1Q8NC96 275 aa18.3■□□□□ 0.52
CCDC9-201ENST00000221922 Q8TCH9 128 aa18.3■□□□□ 0.52
CCDC9-201ENST00000221922 RAB1CQ92928 201 aa18.3■□□□□ 0.52
CCDC9-201ENST00000221922 SNRNP40Q96DI7 357 aaKnown RBP18.3■□□□□ 0.52
CCDC9-201ENST00000221922 CD1BP29016 333 aa18.3■□□□□ 0.52
CCDC9-201ENST00000221922 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.3■□□□□ 0.52
CCDC9-201ENST00000221922 PLPPR2Q96GM1 343 aa18.3■□□□□ 0.52
CCDC9-201ENST00000221922 S1PR3Q99500 378 aa18.3■□□□□ 0.52
CCDC9-201ENST00000221922 TRGV10A0A0A0MS01 117 aa18.29■□□□□ 0.52
CCDC9-201ENST00000221922 PPP5D1E7EU14 171 aa18.29■□□□□ 0.52
CCDC9-201ENST00000221922 NPPCP23582 126 aa18.29■□□□□ 0.52
CCDC9-201ENST00000221922 RPP30P78346 268 aaKnown RBP18.29■□□□□ 0.52
CCDC9-201ENST00000221922 OR52E5Q8NH55 327 aa18.29■□□□□ 0.52
CCDC9-201ENST00000221922 OR4A16Q8NH70 328 aa18.29■□□□□ 0.52
CCDC9-201ENST00000221922 ELOVL1Q9BW60 279 aa18.29■□□□□ 0.52
CCDC9-201ENST00000221922 FAM234AQ9H0X4 552 aa18.29■□□□□ 0.52
CCDC9-201ENST00000221922 KBTBD11-OT1A0A1B0GTJ5 212 aa18.29■□□□□ 0.52
CCDC9-201ENST00000221922 C11orf94C9JXX5 98 aa18.29■□□□□ 0.52
CCDC9-201ENST00000221922 GGCTO75223 188 aaKnown RBP18.29■□□□□ 0.52
CCDC9-201ENST00000221922 FAM3BP58499 235 aaPredicted RBP18.29■□□□□ 0.52
CCDC9-201ENST00000221922 SPCS3P61009 180 aa18.29■□□□□ 0.52
CCDC9-201ENST00000221922 C17orf58Q2M2W7 97 aa18.29■□□□□ 0.52
CCDC9-201ENST00000221922 RPL39P5Q59GN2 51 aa18.29■□□□□ 0.52
CCDC9-201ENST00000221922 DEFA4P12838 97 aa18.28■□□□□ 0.52
CCDC9-201ENST00000221922 IRF2P14316 349 aa18.28■□□□□ 0.52
CCDC9-201ENST00000221922 SRP14P37108 136 aaKnown RBP18.28■□□□□ 0.52
CCDC9-201ENST00000221922 ZNF134P52741 427 aa18.28■□□□□ 0.52
CCDC9-201ENST00000221922 PDLIM3Q53GG5 364 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms