RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 FAM90A5PA8MXJ8 464 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 FAM90A23PA8MXZ1 464 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 FAM90A15PP0C7V4 464 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 FAM90A13PP0C7W8 464 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 FAM90A14PP0C7W9 464 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 FAM90A24PP0C7X0 464 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 PCOLCEQ15113 449 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 SLC25A47Q6Q0C1 308 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 SFRP2Q96HF1 295 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 C1QTNF9BB2RNN3 333 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 SLC25A20O43772 301 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 IGHV3-23P01764 117 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 LINC00862A6NCI5 91 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 DOCK5Q9H7D0 1870 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 AGAP20933 346 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 SRIP30626 198 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 MEF2CQ06413 473 aaPredicted RBP12.73□□□□□ -0.37
UBR5-201ENST00000220959 CFAP161Q6P656 301 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 TRBV7-9A0A0J9YWB2 115 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 MARCH11A6NNE9 402 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 H3BRM9 83 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 NDUFS8O00217 210 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 NGFRP08138 427 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 NPIPB3Q92617 1050 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 A0A1W2PQF6 199 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 F12P00748 615 aaPredicted RBP12.73□□□□□ -0.37
UBR5-201ENST00000220959 CNTFRP26992 372 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 TGIF1Q15583 401 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 LINC00305Q7Z4B0 112 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 SSBP3Q9BWW4 388 aaPredicted RBP12.73□□□□□ -0.37
UBR5-201ENST00000220959 TMEM74BQ9NUR3 256 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 H3BTX0 84 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 GHRHP01286 108 aa12.73□□□□□ -0.37
UBR5-201ENST00000220959 PARD6GQ9BYG4 376 aaPredicted RBP12.73□□□□□ -0.37
UBR5-201ENST00000220959 ALX4Q9H161 411 aaPredicted RBP12.73□□□□□ -0.37
UBR5-201ENST00000220959 ZG16O60844 167 aa12.72□□□□□ -0.37
UBR5-201ENST00000220959 SMIM13P0DJ93 91 aa12.72□□□□□ -0.37
UBR5-201ENST00000220959 VKORC1L1Q8N0U8 176 aa12.72□□□□□ -0.37
UBR5-201ENST00000220959 LINC01587Q99440 93 aa12.72□□□□□ -0.37
UBR5-201ENST00000220959 M0R381 172 aa12.72□□□□□ -0.37
UBR5-201ENST00000220959 LINC01560Q8TB33 94 aa12.72□□□□□ -0.37
UBR5-201ENST00000220959 FSTP19883 344 aa12.72□□□□□ -0.37
UBR5-201ENST00000220959 SAXO1Q8IYX7 474 aa12.72□□□□□ -0.37
UBR5-201ENST00000220959 AICDAQ9GZX7 198 aa12.72□□□□□ -0.37
UBR5-201ENST00000220959 ICAM4Q14773 271 aa12.72□□□□□ -0.37
UBR5-201ENST00000220959 ZPLD1Q8TCW7 415 aa12.71□□□□□ -0.37
UBR5-201ENST00000220959 ASIPP42127 132 aa12.71□□□□□ -0.37
UBR5-201ENST00000220959 RPS11P62280 158 aaKnown RBP eCLIP12.71□□□□□ -0.37
UBR5-201ENST00000220959 NABP2Q9BQ15 211 aa12.71□□□□□ -0.37
UBR5-201ENST00000220959 ANKRD36A6QL64 1941 aa12.71□□□□□ -0.37
UBR5-201ENST00000220959 TRGV2A0A075B6R0 118 aa12.71□□□□□ -0.37
UBR5-201ENST00000220959 A0A1W2PP11 408 aa12.71□□□□□ -0.37
UBR5-201ENST00000220959 KIAA1644Q3SXP7 199 aa12.71□□□□□ -0.37
UBR5-201ENST00000220959 A0A1W2PRX2 142 aa12.71□□□□□ -0.37
UBR5-201ENST00000220959 C1orf162Q8NEQ5 155 aaPredicted RBP12.71□□□□□ -0.37
UBR5-201ENST00000220959 TRBV9A0A0B4J1U6 114 aa12.71□□□□□ -0.38
UBR5-201ENST00000220959 CD160O95971 181 aa12.71□□□□□ -0.38
UBR5-201ENST00000220959 WDR82Q6UXN9 313 aa12.71□□□□□ -0.38
UBR5-201ENST00000220959 SEMA5BQ9P283 1151 aa12.71□□□□□ -0.38
UBR5-201ENST00000220959 IGHV3-49A0A0A0MS15 119 aa12.71□□□□□ -0.38
UBR5-201ENST00000220959 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.71□□□□□ -0.38
UBR5-201ENST00000220959 CDCP2Q5VXM1 449 aa12.71□□□□□ -0.38
UBR5-201ENST00000220959 MRPS18AQ9NVS2 196 aaKnown RBP12.71□□□□□ -0.38
UBR5-201ENST00000220959 MRPL16Q9NX20 251 aaKnown RBP12.71□□□□□ -0.38
UBR5-201ENST00000220959 OR11H12B2RN74 326 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 OR11H1Q8NG94 326 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 OR11H2Q8NH07 326 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 VGLL1Q99990 258 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 SP9P0CG40 484 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 ALS2Q96Q42 1657 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 ACSF3Q4G176 576 aaPredicted RBP12.7□□□□□ -0.38
UBR5-201ENST00000220959 CYP2G1PQ6ZSU1 146 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 NEU4Q8WWR8 484 aaPredicted RBP12.7□□□□□ -0.38
UBR5-201ENST00000220959 NPIPB8E9PQR5 432 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 NPIPB9F8W1W9 429 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 NPIPB7O75200 414 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 STHQ8IWL8 128 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 SLC22A18ASQ8N1D0 253 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 ZNF418Q8TF45 676 aaPredicted RBP12.7□□□□□ -0.38
UBR5-201ENST00000220959 SH3BGRL3Q9H299 93 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 TCF19Q9Y242 345 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 TRAV8-6A0A0B4J262 113 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 NPIPB4C9JG80 1138 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 PLA2G10O15496 165 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 PEMTQ9UBM1 199 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 FAM168AQ92567 244 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 SCARF2Q96GP6 870 aaPredicted RBP12.7□□□□□ -0.38
UBR5-201ENST00000220959 PILRBQ9UKJ0 227 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 MYLKQ15746 1914 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 IGHV3OR16-13A0A075B7E8 117 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 IGHV3-74A0A0B4J1X5 117 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 CENPVL1A0A0U1RR11 272 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 RRHO14718 337 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 GLIPR1P48060 266 aa12.7□□□□□ -0.38
UBR5-201ENST00000220959 GPHA2Q96T91 129 aa12.69□□□□□ -0.38
UBR5-201ENST00000220959 NHSQ6T4R5 1651 aa12.69□□□□□ -0.38
UBR5-201ENST00000220959 SOD3P08294 240 aa12.69□□□□□ -0.38
UBR5-201ENST00000220959 ZNF385CQ66K41 422 aaPredicted RBP12.69□□□□□ -0.38
UBR5-201ENST00000220959 WFIKKN1Q96NZ8 548 aa12.69□□□□□ -0.38
UBR5-201ENST00000220959 VCX2Q9H322 139 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms