RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 SRSF4Q08170 494 aaKnown RBP3.78□□□□□ -1.8
CHD9-201ENST00000219084 TRIP6Q15654 476 aaKnown RBP3.78□□□□□ -1.8
CHD9-201ENST00000219084 CLEC12BQ2HXU8 276 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 OR5A1Q8NGJ0 315 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 OR52M1Q8NGK5 317 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 CCL17Q92583 94 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 FBXO17Q96EF6 278 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 IGKV1D-42A0A075B6H8 117 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 LINC01565O15544 149 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 SPINT1O43278 529 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 HOXA5P20719 270 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 RPL27AP46776 148 aaKnown RBP3.78□□□□□ -1.8
CHD9-201ENST00000219084 MFAP4P55083 255 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 TMEM177Q53S58 311 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 WDR25Q64LD2 544 aaPredicted RBP3.78□□□□□ -1.8
CHD9-201ENST00000219084 ZAR1Q86SH2 424 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 PRNTQ86SH4 94 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 RFLNBQ8N5W9 214 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 ZNF784Q8NCA9 323 aaPredicted RBP3.78□□□□□ -1.8
CHD9-201ENST00000219084 RGP1Q92546 391 aaPredicted RBP3.78□□□□□ -1.8
CHD9-201ENST00000219084 SH3BGRL3Q9H299 93 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 SDK2Q58EX2 2172 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 PPIAL4EA0A075B759 164 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 PPIAL4DF5H284 164 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 TCF21O43680 179 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 PPIAL4FP0DN26 164 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 SLC35B1P78383 322 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 RABAC1Q9UI14 185 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 PPIAL4AQ9Y536 164 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 LY96Q9Y6Y9 160 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 SPTA1P02549 2419 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 CEACAM1P13688 526 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 PAX1P15863 534 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 GPR6P46095 362 aaPredicted RBP3.78□□□□□ -1.8
CHD9-201ENST00000219084 ZP1P60852 638 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 CACNA1EQ15878 2313 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 CENPVQ7Z7K6 275 aaPredicted RBP3.78□□□□□ -1.8
CHD9-201ENST00000219084 RCC1LQ96I51 464 aaKnown RBP3.78□□□□□ -1.8
CHD9-201ENST00000219084 SGK494Q96LW2 274 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 OR4C12Q96R67 309 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 MIEN1Q9BRT3 115 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 SPANXCQ9NY87 97 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 AHCTF1Q8WYP5 2266 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 IZUMO1RA6ND01 250 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 C3orf80F5H4A9 247 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 PIN1P1O15428 100 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 PPBPP02775 128 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 DNM1P46Q6ZS02 220 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 NR2C2APQ86WQ0 139 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 OR4X2Q8NGF9 303 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 TMEM170AQ8WVE7 144 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 ALKBH7Q9BT30 221 aaPredicted RBP3.77□□□□□ -1.81
CHD9-201ENST00000219084 GPR61Q9BZJ8 451 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 DLL3Q9NYJ7 618 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 IL17BQ9UHF5 180 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 DTX4Q9Y2E6 619 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 SYNGR3O43761 229 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 TYMSP04818 313 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 GCHFRP30047 84 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 ACSF3Q4G176 576 aaPredicted RBP3.77□□□□□ -1.81
CHD9-201ENST00000219084 FAM53AQ6NSI3 398 aaPredicted RBP3.77□□□□□ -1.81
CHD9-201ENST00000219084 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 ZNF818PQ6ZRF7 136 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 RFESDQ8TAC1 157 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 DNASE2BQ8WZ79 361 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 RHOVQ96L33 236 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 HIST1H4GQ99525 98 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 KIR2DL4Q99706 377 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 TNFRSF19Q9NS68 423 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 CALYQ9NYX4 217 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 IGHV3-43A0A0B4J1X8 118 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 TRGV8A0A0C4DH27 118 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 IGHV3-43DP0DP04 118 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 SLC22A18ASQ8N1D0 253 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 LRRC75AQ8NAA5 344 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 C2orf16Q68DN1 1984 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 hCG_38984A0A1B0GV85 526 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 FNDC10F2Z333 226 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 RECKO95980 971 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 SOX8P57073 446 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 STARD6P59095 220 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 SIGLEC14Q08ET2 396 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 Q6ZT83 130 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 OR9G1Q8NH87 305 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 ST20Q9HBF5 79 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 THSD7BQ9C0I4 1608 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 A1L4Q6 167 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 SRP19P09132 144 aaKnown RBP3.77□□□□□ -1.81
CHD9-201ENST00000219084 LYL1P12980 280 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 BTCP35070 178 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 SRSF5Q13243 272 aaKnown RBP3.77□□□□□ -1.81
CHD9-201ENST00000219084 EBLN2Q6P2I7 272 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 FADS6Q8N9I5 356 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 ZNF414Q96IQ9 312 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 UCN2Q96RP3 112 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 SLC25A2Q9BXI2 301 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 SMPXQ9UHP9 88 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 PHLDA3Q9Y5J5 127 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 SHISA7A6NL88 538 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 SPINK4O60575 86 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms