RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 RALGAPA1Q6GYQ0 2036 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 MGPP08493 103 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 ZNF362Q5T0B9 420 aaPredicted RBP8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 RNASEKQ6P5S7 137 aaKnown RBP8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 DTX1Q86Y01 620 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 OR4B1Q8NGF8 309 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 NABP1Q96AH0 204 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 SEC11CQ9BY50 192 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 OR5AC2Q9NZP5 309 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 IL36RNQ9UBH0 155 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 CACNA1BQ00975 2339 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 SIGLEC5O15389 551 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 YPEL1O60688 119 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 ZNF705AQ6ZN79 300 aaPredicted RBP8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 YPEL2Q96QA6 119 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 PI4KAP42356 2102 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 SMAGPQ0VAQ4 97 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 MIC13Q5XKP0 118 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 SYT8Q8NBV8 401 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 FBXL7Q9UJT9 491 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 ELOA3CA0A087WX78 387 aaPredicted RBP8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 B4DEV8 164 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 J3QKU1 62 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 PLAUP00749 431 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 VDAC2P45880 294 aaPredicted RBP8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 RND3P61587 244 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 RUNX1Q01196 453 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 ARTNQ5T4W7 220 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 OR51G1Q8NGK1 321 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 PLPPR1Q8TBJ4 325 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 B4DSR2 109 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 HKR1P10072 659 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 DLK1P80370 383 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 LRP11Q86VZ4 500 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 NPIPB3Q92617 1050 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 GTF3AQ92664 365 aaKnown RBP8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 SLC25A33Q9BSK2 321 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 TMPRSS5Q9H3S3 457 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 NBR2O15453 112 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 SP5Q6BEB4 398 aaPredicted RBP8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 C9orf62Q8N4C0 152 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 C2CD4CQ8TF44 421 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 TNFRSF14Q92956 283 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 C8orf88P0DMB2 117 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 DLX6P56179 175 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 RPS11P62280 158 aaKnown RBP eCLIP8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 OR4A47Q6IF82 309 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 FAM169BQ8N8A8 192 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 RSG1Q9BU20 258 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 IGHV3OR16-12A0A075B7B8 117 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 RNF212Q495C1 297 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 NCMAPQ5T1S8 102 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 CYB5R2Q6BCY4 276 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 FAM166AQ6J272 317 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 TMEM37Q8WXS4 190 aa8.69□□□□□ -1.02
NIPAL3-201ENST00000003912 PROB1E7EW31 1015 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 SLC25A16P16260 332 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 PMCHP20382 165 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 TCL1AP56279 114 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 OR10S1Q8NGN2 331 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 OR10C1Q96KK4 312 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 TP53RKQ96S44 253 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 IL4P05112 153 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 KRTDAPP60985 99 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 C11orf42Q8N5U0 333 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 FAM210BQ96KR6 192 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 TUBA4BQ9H853 241 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 FBLN5Q9UBX5 448 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 TSC2P49815 1807 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 TMSB15BA0A087X1C1 80 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 TRAV40A0A0B4J280 105 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 PGPA6NDG6 321 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 SRRM5B3KS81 715 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 SIAH2O43255 324 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 MAS1LP35410 378 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 HIST1H3AP68431 136 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 ZNF497Q6ZNH5 498 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 C19orf35Q6ZS72 473 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 MRPL32Q9BYC8 188 aaKnown RBP8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 CRIM1Q9NZV1 1036 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 TMEM189A5PLL7 270 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 CA2P00918 260 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 NUTF2P61970 127 aaKnown RBP8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 PRR30Q53SZ7 412 aaPredicted RBP8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 SIGIRRQ6IA17 410 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 ZNF474Q6S9Z5 364 aaPredicted RBP8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 C21orf62Q9NYP8 219 aa8.68□□□□□ -1.02
NIPAL3-201ENST00000003912 IGKV1-9A0A0C4DH69 117 aa8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 OR2D3Q8NGH3 330 aa8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 ANGPTL6Q8NI99 470 aa8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 PEMTQ9UBM1 199 aa8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 C17orf98A8MV24 154 aa8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 OR51M1Q9H341 326 aa8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 SRD5A3Q9H8P0 318 aa8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 TRBV6-7A0A0A0MS04 114 aa8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 TMEM178BH3BS89 294 aa8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 BCL2P10415 239 aa8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 FRMPD3Q5JV73 1810 aa8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 SMDT1Q9H4I9 107 aa8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 SAA2-SAA4A0A096LPE2 208 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms