RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Olfr1537P34983 314 aa13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Q0VG62 139 aa13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Lpar6Q8BMC0 344 aa13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 OacylQ8BML2 685 aa13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Olfr1262Q8VGN2 304 aa13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 IcaQ9DBD0 700 aa13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Herpud1Q9JJK5 391 aa13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Vax2Q9WTP9 292 aa13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Ltbp2O08999 1813 aa13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Gm28729A0A1B0GSW2 409 aa13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 SnrpeP62305 92 aaKnown RBP13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Traf4Q61382 470 aa13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Prss3Q792Z0 246 aaKnown RBP13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Zfp455Q7M6X9 461 aa13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Ociad1Q9CRD0 247 aaKnown RBP13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Rab1bQ9D1G1 201 aa13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Pcbp4P57724 403 aaKnown RBP13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Shc1P98083 579 aa13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Ascl1Q02067 231 aa13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Mob3aQ8BSU7 217 aa13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Olfr960Q8VET5 316 aa13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Slc2a8Q9JIF3 477 aa13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Fbxl6Q9QXW0 535 aa13□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Cisd3B1AR13 137 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Gm20422E9PUR3 255 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Olfr1042Q7TR81 313 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 TecrlQ8BFZ1 361 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 RnasekQ8K3C0 98 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 AamdcQ8R0P4 122 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Ms4a6cQ99N08 217 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Olfr1329L7MTV4 313 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Ogg1O08760 345 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Gosr1O88630 250 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 MyogP12979 224 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 MgpP19788 104 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Tbx6P70327 436 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Parp11Q8CFF0 331 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Lamtor1Q9CQ22 161 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 1700029F12RikQ9CRB4 147 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Mrps30Q9D0G0 442 aaKnown RBP12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Cldn34c4A2ANA3 212 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Olfr1154L7MU57 310 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Ascl5M0QWB7 188 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Oas1bQ60856 376 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Gm10309Q8C648 119 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Commd5Q8R395 224 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Olfr1265Q8VEZ3 309 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 UmodQ91X17 642 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Gar1Q9CY66 231 aaKnown RBP12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Sh2d2aQ9QXK9 374 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Olfr467L7N455 308 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Smim6Q3U0I6 56 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Tmem204Q7TQI0 226 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Rspo2Q8BFU0 243 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Olfr186Q8VEX5 309 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 H1fooQ8VIK3 304 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Dram2Q9CR48 267 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Suv39h2Q9EQQ0 477 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Ly96Q9JHF9 160 aa12.99□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Ascl4M0QW46 144 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 GastP48757 101 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Fabp6P51162 128 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Olfr206Q8VGP9 306 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Mgst1Q91VS7 155 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Gm14412A2ARR7 526 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Gm12887B1AVM1 119 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Mesp2O08574 370 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Klf9O35739 244 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 P01635 115 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 GlulP15105 373 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Ube2l3P68037 154 aaKnown RBP12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Znf2Q8BIQ3 427 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 TctaQ8VEA7 122 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Olfr124Q8VGW6 315 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Olfr702Q920Z2 318 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Vkorc1Q9CRC0 161 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 HeylQ9DBX7 326 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Ltbp4Q8K4G1 1666 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 ElobP62869 118 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Prss48Q14B25 312 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Trmt61aQ80XC2 290 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Vash2Q8C5G2 355 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Uqcc3Q8K2T4 89 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Olfr1269Q8VEZ2 309 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Dolpp1Q9JMF7 238 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Tex101Q9JMI7 250 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Mmp17Q9R0S3 578 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Map1bP14873 2464 aaKnown RBP12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Ighv5-15A0A0A6YWC7 117 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 P01629 112 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 B2mP01887 119 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 SrstQ06666 185 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Dhrs11Q3U0B3 260 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Atxn7l2Q8C8K6 696 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Aqp3Q8R2N1 292 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Olfr494Q8VG07 314 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Ethe1Q9DCM0 254 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Trip11E9Q512 1976 aa12.98□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Ighv1-42A0A0A6YY38 117 aa12.97□□□□□ -0.33
Pcdh20-201ENSMUST00000061628 Gm35315A0A1B0GRI2 571 aa12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 59 ms