RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 LINC00574Q9H8X3 128 aa14.68□□□□□ -0.06
PHGDH-226ENST00000641756 LINC00312Q9Y6C7 94 aa14.68□□□□□ -0.06
PHGDH-226ENST00000641756 HBE1P02100 147 aa14.68□□□□□ -0.06
PHGDH-226ENST00000641756 CD3EP07766 207 aa14.68□□□□□ -0.06
PHGDH-226ENST00000641756 THBS3P49746 956 aa14.68□□□□□ -0.06
PHGDH-226ENST00000641756 RELBQ01201 579 aa14.68□□□□□ -0.06
PHGDH-226ENST00000641756 KDF1Q8NAX2 398 aaPredicted RBP14.68□□□□□ -0.06
PHGDH-226ENST00000641756 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.68□□□□□ -0.06
PHGDH-226ENST00000641756 C15orf62A8K5M9 175 aa14.67□□□□□ -0.06
PHGDH-226ENST00000641756 SNRNP70P08621 437 aaKnown RBP14.67□□□□□ -0.06
PHGDH-226ENST00000641756 FBP1P09467 338 aa14.67□□□□□ -0.06
PHGDH-226ENST00000641756 CEBPGP53567 150 aa14.67□□□□□ -0.06
PHGDH-226ENST00000641756 FGF8P55075 233 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-226ENST00000641756 RAB2AP61019 212 aa14.67□□□□□ -0.06
PHGDH-226ENST00000641756 TFF3Q07654 80 aa14.67□□□□□ -0.06
PHGDH-226ENST00000641756 AWAT1Q58HT5 328 aa14.67□□□□□ -0.06
PHGDH-226ENST00000641756 CLDND2Q8NHS1 167 aa14.67□□□□□ -0.06
PHGDH-226ENST00000641756 RXFP4Q8TDU9 374 aa14.67□□□□□ -0.06
PHGDH-226ENST00000641756 H1FXQ92522 213 aaKnown RBP14.67□□□□□ -0.06
PHGDH-226ENST00000641756 FAM90A9PA6NNJ1 464 aa14.66□□□□□ -0.06
PHGDH-226ENST00000641756 M0R036 132 aa14.66□□□□□ -0.06
PHGDH-226ENST00000641756 FGF7P21781 194 aa14.66□□□□□ -0.06
PHGDH-226ENST00000641756 SERF2P84101 59 aa14.66□□□□□ -0.06
PHGDH-226ENST00000641756 ICAM4Q14773 271 aa14.66□□□□□ -0.06
PHGDH-226ENST00000641756 ATP6V1FQ16864 119 aa14.66□□□□□ -0.06
PHGDH-226ENST00000641756 TMEM41BQ5BJD5 291 aa14.66□□□□□ -0.06
PHGDH-226ENST00000641756 PINX1Q96BK5 328 aaKnown RBP14.66□□□□□ -0.06
PHGDH-226ENST00000641756 RPS10P5Q9NQ39 176 aa14.66□□□□□ -0.06
PHGDH-226ENST00000641756 TET2Q6N021 2002 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-226ENST00000641756 SPTA1P02549 2419 aa14.66□□□□□ -0.06
PHGDH-226ENST00000641756 RELNP78509 3460 aa14.66□□□□□ -0.06
PHGDH-226ENST00000641756 SCAF4O95104 1147 aaKnown RBP14.66□□□□□ -0.06
PHGDH-226ENST00000641756 APOBEC3AP31941 199 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-226ENST00000641756 SPCS3P61009 180 aa14.66□□□□□ -0.06
PHGDH-226ENST00000641756 AARDQ4LEZ3 155 aa14.66□□□□□ -0.06
PHGDH-226ENST00000641756 ZNF787Q6DD87 383 aa14.66□□□□□ -0.06
PHGDH-226ENST00000641756 SLC25A48Q6ZT89 311 aaKnown RBP14.66□□□□□ -0.06
PHGDH-226ENST00000641756 ZCCHC14Q8WYQ9 949 aaKnown RBP14.66□□□□□ -0.06
PHGDH-226ENST00000641756 RCC1LQ96I51 464 aaKnown RBP14.66□□□□□ -0.06
PHGDH-226ENST00000641756 IGKV1D-33P01593 117 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 IGKV1-33P01594 117 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 CDSNQ15517 529 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 SOHLH1Q5JUK2 328 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 TMEM200BQ69YZ2 307 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 ACSM6Q6P461 480 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 HIPK2Q9H2X6 1198 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 GAL3ST2Q9H3Q3 398 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 MS4A5Q9H3V2 200 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 GNG13Q9P2W3 67 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 CTSZQ9UBR2 303 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 SPTBN4Q9H254 2564 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 IFNA10P01566 189 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 SRP19P09132 144 aaKnown RBP14.65□□□□□ -0.06
PHGDH-226ENST00000641756 HFEQ30201 348 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 ZNF506Q5JVG8 444 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 OR4A47Q6IF82 309 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 ST6GALNAC3Q8NDV1 305 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 RHOVQ96L33 236 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 ZNF714Q96N38 554 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 SMDT1Q9H4I9 107 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 HEYLQ9NQ87 328 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-226ENST00000641756 TIMM9Q9Y5J7 89 aa14.65□□□□□ -0.06
PHGDH-226ENST00000641756 ARFGEF3Q5TH69 2177 aa14.64□□□□□ -0.07
PHGDH-226ENST00000641756 TRAV1-1A0A0B4J248 108 aa14.64□□□□□ -0.07
PHGDH-226ENST00000641756 TNFRSF13BO14836 293 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-226ENST00000641756 NDUFB3O43676 98 aa14.64□□□□□ -0.07
PHGDH-226ENST00000641756 CT45A6P0DMU7 189 aa14.64□□□□□ -0.07
PHGDH-226ENST00000641756 CT45A5P0DMU8 189 aa14.64□□□□□ -0.07
PHGDH-226ENST00000641756 CT45A7P0DMV0 189 aa14.64□□□□□ -0.07
PHGDH-226ENST00000641756 GNB2P62879 340 aa14.64□□□□□ -0.07
PHGDH-226ENST00000641756 MEF2CQ06413 473 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-226ENST00000641756 CLCC1Q96S66 551 aa14.64□□□□□ -0.07
PHGDH-226ENST00000641756 CISD1Q9NZ45 108 aaKnown RBP14.64□□□□□ -0.07
PHGDH-226ENST00000641756 NDRG3Q9UGV2 375 aa14.64□□□□□ -0.07
PHGDH-226ENST00000641756 C7orf77A4D0Y5 90 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 ZFP92A6NM28 416 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 DVL1O14640 695 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 SIAH2O43255 324 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 DAOP14920 347 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 CHRNB4P30926 498 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 VDAC2P45880 294 aaPredicted RBP14.63□□□□□ -0.07
PHGDH-226ENST00000641756 OR52E5Q8NH55 327 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 MBD3L1Q8WWY6 194 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 ADTRPQ96IZ2 230 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 TCF19Q9Y242 345 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 PUS1Q9Y606 427 aaKnown RBP eCLIP14.63□□□□□ -0.07
PHGDH-226ENST00000641756 IGHV1-69-2A0A0G2JMI3 117 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 C15orf61A6NNL5 157 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 B9A039 149 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 RRHO14718 337 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 ARG1P05089 322 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 MYOD1P15172 320 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 HOXA1P49639 335 aaPredicted RBP14.63□□□□□ -0.07
PHGDH-226ENST00000641756 TMEM30BQ3MIR4 351 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 LRRC10Q5BKY1 277 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 ABHD12Q8N2K0 398 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 CYB561D1Q8N8Q1 229 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 NPCDR1Q9BY65 106 aa14.63□□□□□ -0.07
PHGDH-226ENST00000641756 LOC102723971A0A1B0GUV8 181 aa14.62□□□□□ -0.07
PHGDH-226ENST00000641756 MAP1LC3B2A6NCE7 125 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms