RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 KCNIP3Q9Y2W7 256 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 POMT1Q9Y6A1 747 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 FCGR3BO75015 233 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 S1PR2O95136 353 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 SPDEFO95238 335 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 CRYZL1O95825 349 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 IGKV1D-33P01593 117 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 IGKV1-33P01594 117 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 IGHV4-59P01825 116 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 APOA2P02652 100 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 AMY1AP04745 511 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 SNRNP70P08621 437 aaKnown RBP7.27□□□□□ -1.25
SCARB2-225ENST00000640900 FAM106CPP0CH98 169 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 HLA-GP17693 338 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 LPAR6P43657 344 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 SRPXP78539 464 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 TRIM16LQ309B1 348 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 SP6Q3SY56 376 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 AARDQ4LEZ3 155 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 NMSQ5H8A3 153 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 Q6ZNX1 250 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 SELENOHQ8IZQ5 122 aaKnown RBP7.27□□□□□ -1.25
SCARB2-225ENST00000640900 PUSL1Q8N0Z8 303 aaKnown RBP7.27□□□□□ -1.25
SCARB2-225ENST00000640900 FAM71E2Q8N5Q1 922 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 OR2T10Q8NGZ9 312 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 ZNF431Q8TF32 576 aaPredicted RBP7.27□□□□□ -1.25
SCARB2-225ENST00000640900 FLYWCH2Q96CP2 140 aaKnown RBP7.27□□□□□ -1.25
SCARB2-225ENST00000640900 RBM14Q96PK6 669 aaKnown RBP7.27□□□□□ -1.25
SCARB2-225ENST00000640900 ESM1Q9NQ30 184 aa7.27□□□□□ -1.25
SCARB2-225ENST00000640900 A0A0A6YYJ9 748 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 DUXBA0A1W2PPF3 345 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 H3BUX3 64 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 OR2F2O95006 317 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 DHFRP00374 187 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 IGKV1-5P01602 117 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 HLA-AP01891 365 aaKnown RBP7.26□□□□□ -1.25
SCARB2-225ENST00000640900 SERPINE2P07093 398 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 NQO2P16083 231 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 CD24P25063 80 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 F2RL1P55085 397 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 RAB25P57735 213 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 HILS1P60008 231 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 UBE2KP61086 200 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 SLC9A3R2Q15599 337 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 TATDN3Q17R31 274 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 ARSJQ5FYB0 599 aaPredicted RBP7.26□□□□□ -1.25
SCARB2-225ENST00000640900 C11orf88Q6PI97 169 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 C16orf82Q7Z2V1 217 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 Q8N9W7 124 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 TEX45Q8NA69 505 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 OR52B4Q8NGK2 314 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 RBPMSQ93062 196 aaKnown RBP7.26□□□□□ -1.25
SCARB2-225ENST00000640900 LSM10Q969L4 123 aaKnown RBP7.26□□□□□ -1.25
SCARB2-225ENST00000640900 RHOVQ96L33 236 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 TSNAXQ99598 290 aaKnown RBP7.26□□□□□ -1.25
SCARB2-225ENST00000640900 SEC22CQ9BRL7 303 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 BET1LQ9NYM9 111 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 VPREB3Q9UKI3 123 aa7.26□□□□□ -1.25
SCARB2-225ENST00000640900 PIGBOS1A0A0B4J2F0 54 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 H7C2Y5 167 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 RRHO14718 337 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 FGF16O43320 207 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 HOXA3O43365 443 aaPredicted RBP7.25□□□□□ -1.25
SCARB2-225ENST00000640900 CHST1O43916 411 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 PITX3O75364 302 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 HRASP01112 189 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 SLC25A6P12236 298 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 ANXA3P12429 323 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 VDAC1P21796 283 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 VAMP1P23763 118 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 CNTFRP26992 372 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 SSBP2P81877 361 aaPredicted RBP7.25□□□□□ -1.25
SCARB2-225ENST00000640900 PSG5Q15238 335 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 C5orf64Q2M2E5 130 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 C4orf46Q504U0 113 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 OR2B11Q5JQS5 317 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 LGI3Q8N145 548 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 TMEM167AQ8TBQ9 72 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 R3HDM4Q96D70 268 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 HARBI1Q96MB7 349 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 AIFM2Q9BRQ8 373 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 BEX1Q9HBH7 125 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 PITPNC1Q9UKF7 332 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 SIGLEC9Q9Y336 463 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 PLXNB1O43157 2135 aa7.25□□□□□ -1.25
SCARB2-225ENST00000640900 SETD2Q9BYW2 2564 aaPredicted RBP7.24□□□□□ -1.25
SCARB2-225ENST00000640900 JMJD1CQ15652 2540 aa7.24□□□□□ -1.25
SCARB2-225ENST00000640900 A0A0G2JRQ6 117 aa7.24□□□□□ -1.25
SCARB2-225ENST00000640900 DNAJC9-AS1A6NH13 148 aa7.24□□□□□ -1.25
SCARB2-225ENST00000640900 MARCH11A6NNE9 402 aa7.24□□□□□ -1.25
SCARB2-225ENST00000640900 M0QZK8 103 aa7.24□□□□□ -1.25
SCARB2-225ENST00000640900 SHOXO15266 292 aa7.24□□□□□ -1.25
SCARB2-225ENST00000640900 NBR2O15453 112 aa7.24□□□□□ -1.25
SCARB2-225ENST00000640900 HLA-DRB1P01911 266 aa7.24□□□□□ -1.25
SCARB2-225ENST00000640900 RNASE1P07998 156 aaKnown RBP7.24□□□□□ -1.25
SCARB2-225ENST00000640900 SAA1P0DJI8 122 aaPredicted RBP7.24□□□□□ -1.25
SCARB2-225ENST00000640900 TMEM11P17152 192 aa7.24□□□□□ -1.25
SCARB2-225ENST00000640900 RPL15P61313 204 aaKnown RBP7.24□□□□□ -1.25
SCARB2-225ENST00000640900 RPS16P62249 146 aaKnown RBP7.24□□□□□ -1.25
SCARB2-225ENST00000640900 IL15RAQ13261 267 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms