RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 ZNF146Q15072 292 aa13.12□□□□□ -0.31
UBE3A-227ENST00000638011 SPEM1Q8N4L4 309 aa13.12□□□□□ -0.31
UBE3A-227ENST00000638011 TRBV20OR9-2A0A075B6H5 130 aa13.12□□□□□ -0.31
UBE3A-227ENST00000638011 H0YL77 283 aa13.12□□□□□ -0.31
UBE3A-227ENST00000638011 NKG7Q16617 165 aa13.12□□□□□ -0.31
UBE3A-227ENST00000638011 ZNF815PA8K554 130 aa13.12□□□□□ -0.31
UBE3A-227ENST00000638011 ACSF3Q4G176 576 aaPredicted RBP13.12□□□□□ -0.31
UBE3A-227ENST00000638011 CENPWQ5EE01 88 aa13.12□□□□□ -0.31
UBE3A-227ENST00000638011 CBLN1P23435 193 aa13.12□□□□□ -0.31
UBE3A-227ENST00000638011 MGAT2Q10469 447 aa13.12□□□□□ -0.31
UBE3A-227ENST00000638011 PRSS27Q9BQR3 290 aa13.12□□□□□ -0.31
UBE3A-227ENST00000638011 COX11Q9Y6N1 276 aa13.12□□□□□ -0.31
UBE3A-227ENST00000638011 MEX3AA1L020 520 aaKnown RBP13.12□□□□□ -0.31
UBE3A-227ENST00000638011 ZNF658BQ4V348 819 aaPredicted RBP13.12□□□□□ -0.31
UBE3A-227ENST00000638011 TMEM252Q8N6L7 170 aa13.12□□□□□ -0.31
UBE3A-227ENST00000638011 SNRPD3P62318 126 aaKnown RBP13.11□□□□□ -0.31
UBE3A-227ENST00000638011 GATAD1Q8WUU5 269 aa13.11□□□□□ -0.31
UBE3A-227ENST00000638011 EFNB1P98172 346 aa13.11□□□□□ -0.31
UBE3A-227ENST00000638011 MORN3Q6PF18 240 aaPredicted RBP13.11□□□□□ -0.31
UBE3A-227ENST00000638011 CCL28Q9NRJ3 127 aa13.11□□□□□ -0.31
UBE3A-227ENST00000638011 WNT5AP41221 380 aa13.11□□□□□ -0.31
UBE3A-227ENST00000638011 SAMD5Q5TGI4 173 aa13.11□□□□□ -0.31
UBE3A-227ENST00000638011 CIARTQ8N365 385 aaPredicted RBP13.11□□□□□ -0.31
UBE3A-227ENST00000638011 C2orf68Q2NKX9 166 aa13.11□□□□□ -0.31
UBE3A-227ENST00000638011 TMEM106BQ9NUM4 274 aa13.11□□□□□ -0.31
UBE3A-227ENST00000638011 KLKB1P03952 638 aa13.11□□□□□ -0.31
UBE3A-227ENST00000638011 ATOH7Q8N100 152 aa13.11□□□□□ -0.31
UBE3A-227ENST00000638011 ZNF585BQ52M93 769 aa13.11□□□□□ -0.31
UBE3A-227ENST00000638011 GNB1LQ9BYB4 327 aa13.11□□□□□ -0.31
UBE3A-227ENST00000638011 NXT2Q9NPJ8 142 aaKnown RBP13.11□□□□□ -0.31
UBE3A-227ENST00000638011 CX3CL1P78423 397 aa13.1□□□□□ -0.31
UBE3A-227ENST00000638011 HOXA3O43365 443 aaPredicted RBP13.1□□□□□ -0.31
UBE3A-227ENST00000638011 MFAP4P55083 255 aa13.1□□□□□ -0.31
UBE3A-227ENST00000638011 LAMTOR1Q6IAA8 161 aa13.1□□□□□ -0.31
UBE3A-227ENST00000638011 FGF22Q9HCT0 170 aa13.1□□□□□ -0.31
UBE3A-227ENST00000638011 PLXNA3P51805 1871 aa13.1□□□□□ -0.31
UBE3A-227ENST00000638011 LINC00587B1AMM8 73 aa13.1□□□□□ -0.31
UBE3A-227ENST00000638011 TBR1Q16650 682 aa13.1□□□□□ -0.31
UBE3A-227ENST00000638011 ANAPC1Q9H1A4 1944 aa13.1□□□□□ -0.31
UBE3A-227ENST00000638011 VWA8A3KMH1 1905 aa13.1□□□□□ -0.31
UBE3A-227ENST00000638011 IGHV3-64DA0A0J9YX35 117 aa13.1□□□□□ -0.31
UBE3A-227ENST00000638011 OR13H1Q8NG92 308 aa13.1□□□□□ -0.31
UBE3A-227ENST00000638011 AQP3Q92482 292 aa13.1□□□□□ -0.31
UBE3A-227ENST00000638011 RNF224P0DH78 156 aa13.1□□□□□ -0.31
UBE3A-227ENST00000638011 HTN1P15515 57 aa13.1□□□□□ -0.31
UBE3A-227ENST00000638011 DLX4Q92988 240 aaPredicted RBP13.1□□□□□ -0.31
UBE3A-227ENST00000638011 GPR132Q9UNW8 380 aa13.1□□□□□ -0.31
UBE3A-227ENST00000638011 RLFQ13129 1914 aa13.1□□□□□ -0.31
UBE3A-227ENST00000638011 OR10W1Q8NGF6 305 aa13.09□□□□□ -0.31
UBE3A-227ENST00000638011 CLDND2Q8NHS1 167 aa13.09□□□□□ -0.31
UBE3A-227ENST00000638011 TRBV23-1A0A0A0MS06 115 aa13.09□□□□□ -0.31
UBE3A-227ENST00000638011 GRIFINA4D1Z8 144 aa13.09□□□□□ -0.31
UBE3A-227ENST00000638011 CXorf67Q86X51 503 aaPredicted RBP13.09□□□□□ -0.31
UBE3A-227ENST00000638011 LILRA3Q8N6C8 439 aaPredicted RBP13.09□□□□□ -0.31
UBE3A-227ENST00000638011 OR5AN1Q8NGI8 311 aa13.09□□□□□ -0.31
UBE3A-227ENST00000638011 DEFB127Q9H1M4 99 aa13.09□□□□□ -0.31
UBE3A-227ENST00000638011 MARF1Q9Y4F3 1742 aaKnown RBP13.09□□□□□ -0.31
UBE3A-227ENST00000638011 HCFC2Q9Y5Z7 792 aa13.09□□□□□ -0.31
UBE3A-227ENST00000638011 NUDT8Q8WV74 236 aa13.09□□□□□ -0.31
UBE3A-227ENST00000638011 OTOGLQ3ZCN5 2332 aa13.09□□□□□ -0.31
UBE3A-227ENST00000638011 RASL11AQ6T310 242 aa13.09□□□□□ -0.31
UBE3A-227ENST00000638011 SAXO1Q8IYX7 474 aa13.09□□□□□ -0.31
UBE3A-227ENST00000638011 SLC25A15Q9Y619 301 aa13.09□□□□□ -0.31
UBE3A-227ENST00000638011 MARCH11A6NNE9 402 aa13.09□□□□□ -0.31
UBE3A-227ENST00000638011 SSBP2P81877 361 aaPredicted RBP13.09□□□□□ -0.31
UBE3A-227ENST00000638011 SRSF12Q8WXF0 261 aaKnown RBP13.09□□□□□ -0.31
UBE3A-227ENST00000638011 PCOLCE2Q9UKZ9 415 aa13.09□□□□□ -0.31
UBE3A-227ENST00000638011 PPIAL4DF5H284 164 aa13.09□□□□□ -0.31
UBE3A-227ENST00000638011 WNT10AQ9GZT5 417 aa13.09□□□□□ -0.31
UBE3A-227ENST00000638011 KLK13Q9UKR3 277 aa13.09□□□□□ -0.31
UBE3A-227ENST00000638011 TMSB15BA0A087X1C1 80 aa13.08□□□□□ -0.31
UBE3A-227ENST00000638011 CDC42EP2O14613 210 aa13.08□□□□□ -0.31
UBE3A-227ENST00000638011 CCL17Q92583 94 aa13.08□□□□□ -0.31
UBE3A-227ENST00000638011 H3BUT2 72 aa13.08□□□□□ -0.32
UBE3A-227ENST00000638011 FBLIM1Q8WUP2 373 aa13.08□□□□□ -0.32
UBE3A-227ENST00000638011 TNFRSF19Q9NS68 423 aa13.08□□□□□ -0.32
UBE3A-227ENST00000638011 DENND4CQ5VZ89 1909 aa13.08□□□□□ -0.32
UBE3A-227ENST00000638011 NPFFO15130 113 aa13.08□□□□□ -0.32
UBE3A-227ENST00000638011 DPM2O94777 84 aa13.08□□□□□ -0.32
UBE3A-227ENST00000638011 TNFRSF12AQ9NP84 129 aa13.08□□□□□ -0.32
UBE3A-227ENST00000638011 TMEM238C9JI98 176 aa13.08□□□□□ -0.32
UBE3A-227ENST00000638011 GCSAMQ8N6F7 178 aa13.08□□□□□ -0.32
UBE3A-227ENST00000638011 BADQ92934 168 aa13.08□□□□□ -0.32
UBE3A-227ENST00000638011 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.08□□□□□ -0.32
UBE3A-227ENST00000638011 FGF12P61328 243 aa13.08□□□□□ -0.32
UBE3A-227ENST00000638011 MSRB3Q8IXL7 192 aa13.08□□□□□ -0.32
UBE3A-227ENST00000638011 SCGB3A1Q96QR1 104 aa13.08□□□□□ -0.32
UBE3A-227ENST00000638011 VSIG8P0DPA2 414 aa13.08□□□□□ -0.32
UBE3A-227ENST00000638011 ZNF56Q15929 161 aa13.08□□□□□ -0.32
UBE3A-227ENST00000638011 ACER2Q5QJU3 275 aa13.08□□□□□ -0.32
UBE3A-227ENST00000638011 MFRPQ9BY79 579 aa13.08□□□□□ -0.32
UBE3A-227ENST00000638011 CRPP02741 224 aa13.07□□□□□ -0.32
UBE3A-227ENST00000638011 RIPPLY3P57055 190 aa13.07□□□□□ -0.32
UBE3A-227ENST00000638011 LHX8Q68G74 356 aa13.07□□□□□ -0.32
UBE3A-227ENST00000638011 THSD4Q6ZMP0 1018 aa13.07□□□□□ -0.32
UBE3A-227ENST00000638011 DSCAML1Q8TD84 2053 aa13.07□□□□□ -0.32
UBE3A-227ENST00000638011 C3orf80F5H4A9 247 aa13.07□□□□□ -0.32
UBE3A-227ENST00000638011 FAM106CPP0CH98 169 aa13.07□□□□□ -0.32
UBE3A-227ENST00000638011 OTX1P32242 354 aaPredicted RBP13.07□□□□□ -0.32
UBE3A-227ENST00000638011 RPL31P62899 125 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms