RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 VSTM2AQ8TAG5 236 aa14.6□□□□□ -0.07
CLN6-221ENST00000637494 SRSF12Q8WXF0 261 aaKnown RBP14.6□□□□□ -0.07
CLN6-221ENST00000637494 WWC2-AS2Q96NR7 200 aa14.6□□□□□ -0.07
CLN6-221ENST00000637494 SPIN2AQ99865 258 aa14.6□□□□□ -0.07
CLN6-221ENST00000637494 SPIN2BQ9BPZ2 258 aa14.6□□□□□ -0.07
CLN6-221ENST00000637494 OR9G9P0C7N8 305 aa14.59□□□□□ -0.07
CLN6-221ENST00000637494 SAA1P0DJI8 122 aaPredicted RBP14.59□□□□□ -0.07
CLN6-221ENST00000637494 APELAP0DMC3 54 aa14.59□□□□□ -0.07
CLN6-221ENST00000637494 CBX5P45973 191 aa14.59□□□□□ -0.07
CLN6-221ENST00000637494 OR2B11Q5JQS5 317 aa14.59□□□□□ -0.07
CLN6-221ENST00000637494 ZNF66Q6ZN08 573 aa14.59□□□□□ -0.07
CLN6-221ENST00000637494 OVCH2Q7RTZ1 564 aa14.59□□□□□ -0.07
CLN6-221ENST00000637494 ANKRD13BQ86YJ7 626 aa14.59□□□□□ -0.07
CLN6-221ENST00000637494 RSRP1Q9BUV0 290 aa14.59□□□□□ -0.07
CLN6-221ENST00000637494 SPATA2Q9UM82 520 aa14.59□□□□□ -0.07
CLN6-221ENST00000637494 IGKV1D-13A0A0B4J2D9 117 aa14.58□□□□□ -0.08
CLN6-221ENST00000637494 IGKV1-13P0DP09 117 aa14.58□□□□□ -0.08
CLN6-221ENST00000637494 SPNP16150 400 aa14.58□□□□□ -0.08
CLN6-221ENST00000637494 KIR2DS2P43631 304 aa14.58□□□□□ -0.08
CLN6-221ENST00000637494 SLC25A42Q86VD7 318 aa14.58□□□□□ -0.08
CLN6-221ENST00000637494 HOGA1Q86XE5 327 aa14.58□□□□□ -0.08
CLN6-221ENST00000637494 SLC25A38Q96DW6 304 aa14.58□□□□□ -0.08
CLN6-221ENST00000637494 S100A16Q96FQ6 103 aaKnown RBP14.58□□□□□ -0.08
CLN6-221ENST00000637494 AIFM2Q9BRQ8 373 aa14.58□□□□□ -0.08
CLN6-221ENST00000637494 ZNF430Q9H8G1 570 aaPredicted RBP14.58□□□□□ -0.08
CLN6-221ENST00000637494 PEF1Q9UBV8 284 aaKnown RBP14.58□□□□□ -0.08
CLN6-221ENST00000637494 U3KQK5 164 aa14.58□□□□□ -0.08
CLN6-221ENST00000637494 A0A087WXM4 84 aa14.57□□□□□ -0.08
CLN6-221ENST00000637494 AIREO43918 545 aa14.57□□□□□ -0.08
CLN6-221ENST00000637494 HRASP01112 189 aa14.57□□□□□ -0.08
CLN6-221ENST00000637494 GP9P14770 177 aa14.57□□□□□ -0.08
CLN6-221ENST00000637494 FCGR2CP31995 323 aa14.57□□□□□ -0.08
CLN6-221ENST00000637494 MFSD4AQ8N468 514 aa14.57□□□□□ -0.08
CLN6-221ENST00000637494 SECTM1Q8WVN6 248 aa14.57□□□□□ -0.08
CLN6-221ENST00000637494 AUNIPQ9H7T9 357 aa14.57□□□□□ -0.08
CLN6-221ENST00000637494 IFT46Q9NQC8 304 aa14.57□□□□□ -0.08
CLN6-221ENST00000637494 TAS2R8Q9NYW2 309 aa14.57□□□□□ -0.08
CLN6-221ENST00000637494 DPPA5A6NC42 116 aa14.56□□□□□ -0.08
CLN6-221ENST00000637494 FAM223BA6NKX1 122 aa14.56□□□□□ -0.08
CLN6-221ENST00000637494 OR2A4O95047 310 aa14.56□□□□□ -0.08
CLN6-221ENST00000637494 TNFAIP8O95379 198 aa14.56□□□□□ -0.08
CLN6-221ENST00000637494 RPL30P62888 115 aaKnown RBP14.56□□□□□ -0.08
CLN6-221ENST00000637494 MSMO1Q15800 293 aa14.56□□□□□ -0.08
CLN6-221ENST00000637494 RPEL1Q2QD12 228 aa14.56□□□□□ -0.08
CLN6-221ENST00000637494 ZNF343Q6P1L6 599 aa14.56□□□□□ -0.08
CLN6-221ENST00000637494 FAM223AQ8IWN6 122 aa14.56□□□□□ -0.08
CLN6-221ENST00000637494 GVQW1Q8N7I0 195 aa14.56□□□□□ -0.08
CLN6-221ENST00000637494 ZBTB34Q8NCN2 500 aa14.56□□□□□ -0.08
CLN6-221ENST00000637494 ADAD2Q8NCV1 583 aaKnown RBP14.56□□□□□ -0.08
CLN6-221ENST00000637494 SNAPC3Q92966 411 aa14.56□□□□□ -0.08
CLN6-221ENST00000637494 OR2A7Q96R45 310 aa14.56□□□□□ -0.08
CLN6-221ENST00000637494 MAS1LP35410 378 aa14.55□□□□□ -0.08
CLN6-221ENST00000637494 ATP5G2Q06055 141 aa14.55□□□□□ -0.08
CLN6-221ENST00000637494 CATR1Q13166 79 aa14.55□□□□□ -0.08
CLN6-221ENST00000637494 MRGPRG-AS1Q2M3A8 158 aa14.55□□□□□ -0.08
CLN6-221ENST00000637494 FAM209BQ5JX69 171 aa14.55□□□□□ -0.08
CLN6-221ENST00000637494 TSPAN14Q8NG11 270 aa14.55□□□□□ -0.08
CLN6-221ENST00000637494 OR13F1Q8NGS4 319 aa14.55□□□□□ -0.08
CLN6-221ENST00000637494 BORCS5Q969J3 196 aa14.55□□□□□ -0.08
CLN6-221ENST00000637494 ASCL2Q99929 193 aa14.55□□□□□ -0.08
CLN6-221ENST00000637494 KBTBD11O94819 623 aa14.54□□□□□ -0.08
CLN6-221ENST00000637494 PPYP01298 95 aa14.54□□□□□ -0.08
CLN6-221ENST00000637494 IGLV2-14P01704 120 aa14.54□□□□□ -0.08
CLN6-221ENST00000637494 SYNJ2BPP57105 145 aa14.54□□□□□ -0.08
CLN6-221ENST00000637494 RHOGP84095 191 aa14.54□□□□□ -0.08
CLN6-221ENST00000637494 DEFA5Q01523 94 aa14.54□□□□□ -0.08
CLN6-221ENST00000637494 DYRK1AQ13627 763 aa14.54□□□□□ -0.08
CLN6-221ENST00000637494 KLF5Q13887 457 aaPredicted RBP14.54□□□□□ -0.08
CLN6-221ENST00000637494 UBE2NLQ5JXB2 153 aa14.54□□□□□ -0.08
CLN6-221ENST00000637494 TTC9CQ8N5M4 171 aa14.54□□□□□ -0.08
CLN6-221ENST00000637494 OR5AP2Q8NGF4 316 aa14.54□□□□□ -0.08
CLN6-221ENST00000637494 OR9G4Q8NGQ1 327 aa14.54□□□□□ -0.08
CLN6-221ENST00000637494 SLC5A7Q9GZV3 580 aa14.54□□□□□ -0.08
CLN6-221ENST00000637494 CCL28Q9NRJ3 127 aa14.54□□□□□ -0.08
CLN6-221ENST00000637494 H0Y980 276 aa14.53□□□□□ -0.08
CLN6-221ENST00000637494 TNFSF12O43508 249 aa14.53□□□□□ -0.08
CLN6-221ENST00000637494 XRCC3O43542 346 aa14.53□□□□□ -0.08
CLN6-221ENST00000637494 DHFRP00374 187 aa14.53□□□□□ -0.08
CLN6-221ENST00000637494 RPL27AP46776 148 aaKnown RBP14.53□□□□□ -0.08
CLN6-221ENST00000637494 FXYD4P59646 89 aa14.53□□□□□ -0.08
CLN6-221ENST00000637494 EXOSC2Q13868 293 aaKnown RBP14.53□□□□□ -0.08
CLN6-221ENST00000637494 VKORC1L1Q8N0U8 176 aa14.53□□□□□ -0.08
CLN6-221ENST00000637494 TMEM167AQ8TBQ9 72 aa14.53□□□□□ -0.08
CLN6-221ENST00000637494 AKIP1Q9NQ31 210 aa14.53□□□□□ -0.08
CLN6-221ENST00000637494 PEMTQ9UBM1 199 aa14.53□□□□□ -0.08
CLN6-221ENST00000637494 ZNF257Q9Y2Q1 563 aa14.53□□□□□ -0.08
CLN6-221ENST00000637494 IGLV1-51P01701 117 aa14.52□□□□□ -0.09
CLN6-221ENST00000637494 FCER2P06734 321 aa14.52□□□□□ -0.09
CLN6-221ENST00000637494 HERV-K104P61576 105 aa14.52□□□□□ -0.09
CLN6-221ENST00000637494 LSM3P62310 102 aaKnown RBP14.52□□□□□ -0.09
CLN6-221ENST00000637494 EIF4EBP1Q13541 118 aaPredicted RBP14.52□□□□□ -0.09
CLN6-221ENST00000637494 TMEM69Q5SWH9 247 aa14.52□□□□□ -0.09
CLN6-221ENST00000637494 PUSL1Q8N0Z8 303 aaKnown RBP14.52□□□□□ -0.09
CLN6-221ENST00000637494 SAMD12Q8N8I0 201 aa14.52□□□□□ -0.09
CLN6-221ENST00000637494 NECAP1Q8NC96 275 aa14.52□□□□□ -0.09
CLN6-221ENST00000637494 GIMAP1Q8WWP7 306 aa14.52□□□□□ -0.09
CLN6-221ENST00000637494 FYTTD1Q96QD9 318 aaKnown RBP14.52□□□□□ -0.09
CLN6-221ENST00000637494 MEIS3P1A6NDR6 274 aa14.51□□□□□ -0.09
CLN6-221ENST00000637494 PRH1P02810 166 aa14.51□□□□□ -0.09
CLN6-221ENST00000637494 PTHLHP12272 177 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms