RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 OPN3Q9H1Y3 402 aaPredicted RBP13.32□□□□□ -0.28
CHRNA7-221ENST00000636898 NCOR1P1Q9H4R4 102 aa13.32□□□□□ -0.28
CHRNA7-221ENST00000636898 INTS1Q8N201 2190 aaKnown RBP13.32□□□□□ -0.28
CHRNA7-221ENST00000636898 C11orf94C9JXX5 98 aa13.32□□□□□ -0.28
CHRNA7-221ENST00000636898 HRASP01112 189 aa13.32□□□□□ -0.28
CHRNA7-221ENST00000636898 ERVK-16P61578 105 aa13.32□□□□□ -0.28
CHRNA7-221ENST00000636898 LTC4SQ16873 150 aa13.32□□□□□ -0.28
CHRNA7-221ENST00000636898 LURAP1LQ8IV03 231 aa13.32□□□□□ -0.28
CHRNA7-221ENST00000636898 OR4X1Q8NH49 305 aa13.32□□□□□ -0.28
CHRNA7-221ENST00000636898 S100PBPQ96BU1 408 aa13.32□□□□□ -0.28
CHRNA7-221ENST00000636898 DUSP13Q9UII6 198 aa13.32□□□□□ -0.28
CHRNA7-221ENST00000636898 GAB2Q9UQC2 676 aa13.32□□□□□ -0.28
CHRNA7-221ENST00000636898 MBD3L4A6NDZ8 208 aaPredicted RBP13.31□□□□□ -0.28
CHRNA7-221ENST00000636898 MBD3L3A6NE82 208 aaPredicted RBP13.31□□□□□ -0.28
CHRNA7-221ENST00000636898 MBD3L5A6NJ08 208 aaPredicted RBP13.31□□□□□ -0.28
CHRNA7-221ENST00000636898 M0R1X1 148 aa13.31□□□□□ -0.28
CHRNA7-221ENST00000636898 IGHV3-13P01766 116 aa13.31□□□□□ -0.28
CHRNA7-221ENST00000636898 PLA2G5P39877 138 aa13.31□□□□□ -0.28
CHRNA7-221ENST00000636898 OPRK1P41145 380 aa13.31□□□□□ -0.28
CHRNA7-221ENST00000636898 VDAC2P45880 294 aaPredicted RBP13.31□□□□□ -0.28
CHRNA7-221ENST00000636898 TLE1Q04724 770 aa13.31□□□□□ -0.28
CHRNA7-221ENST00000636898 C4orf17Q53FE4 359 aa13.31□□□□□ -0.28
CHRNA7-221ENST00000636898 GCSAMQ8N6F7 178 aa13.31□□□□□ -0.28
CHRNA7-221ENST00000636898 MBD3L2Q8NHZ7 208 aaPredicted RBP13.31□□□□□ -0.28
CHRNA7-221ENST00000636898 IFI27L2Q9H2X8 130 aa13.31□□□□□ -0.28
CHRNA7-221ENST00000636898 HEATR1Q9H583 2144 aaKnown RBP13.31□□□□□ -0.28
CHRNA7-221ENST00000636898 HCFC1P51610 2035 aa13.31□□□□□ -0.28
CHRNA7-221ENST00000636898 ZNF729A6NN14 1252 aaPredicted RBP13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 PPP5D1E7EU14 171 aa13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 GYPAP02724 150 aa13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 FAM3BP58499 235 aaPredicted RBP13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 Q8TCH9 128 aa13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 TXNDC17Q9BRA2 123 aa13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 RAB9BQ9NP90 201 aa13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 PRSS46E5RG02 174 aa13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 IFNA10P01566 189 aa13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 HIST1H1BP16401 226 aaKnown RBP13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 WT1P19544 449 aaPredicted RBP13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 SRP14P37108 136 aaKnown RBP13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 RAB7AP51149 207 aa13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 RELBQ01201 579 aa13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 MSMPQ1L6U9 139 aa13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 C3orf36Q3SXR2 165 aa13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 FAM209BQ5JX69 171 aa13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 TMEM183AQ8IXX5 376 aa13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 PFDN5Q99471 154 aa13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 S1PR3Q99500 378 aa13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 KCNIP2Q9NS61 270 aa13.3□□□□□ -0.28
CHRNA7-221ENST00000636898 TRGV8A0A0C4DH27 118 aa13.29□□□□□ -0.28
CHRNA7-221ENST00000636898 TMPRSS2O15393 492 aa13.29□□□□□ -0.28
CHRNA7-221ENST00000636898 GFRA3O60609 400 aa13.29□□□□□ -0.28
CHRNA7-221ENST00000636898 GGCTO75223 188 aaKnown RBP13.29□□□□□ -0.28
CHRNA7-221ENST00000636898 LHBP01229 141 aa13.29□□□□□ -0.28
CHRNA7-221ENST00000636898 FTH1P19P0C7X4 201 aa13.29□□□□□ -0.28
CHRNA7-221ENST00000636898 CD99P14209 185 aa13.29□□□□□ -0.28
CHRNA7-221ENST00000636898 PDZD11Q5EBL8 140 aa13.29□□□□□ -0.28
CHRNA7-221ENST00000636898 COA6Q5JTJ3 125 aaKnown RBP13.29□□□□□ -0.28
CHRNA7-221ENST00000636898 TREML4Q6UXN2 200 aa13.29□□□□□ -0.28
CHRNA7-221ENST00000636898 ZNF383Q8NA42 475 aa13.29□□□□□ -0.28
CHRNA7-221ENST00000636898 DDB2Q92466 427 aa13.29□□□□□ -0.28
CHRNA7-221ENST00000636898 OR2V2Q96R30 315 aa13.29□□□□□ -0.28
CHRNA7-221ENST00000636898 HEYLQ9NQ87 328 aaPredicted RBP13.29□□□□□ -0.28
CHRNA7-221ENST00000636898 A0A1W2PPV4 95 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 CEACAM4O75871 244 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 TYMSP04818 313 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 CGB3P0DN86 165 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 CGB7P0DN87 165 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 FABP4P15090 132 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 NPPCP23582 126 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 ZNF134P52741 427 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 RPL39P5Q59GN2 51 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 TIMM23BQ5SRD1 257 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 SEM1Q6ZVN7 128 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 SSX9Q7RTT3 188 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 LRP11Q86VZ4 500 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 NECAP1Q8NC96 275 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 OR4S2Q8NH73 311 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 MEGF10Q96KG7 1140 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 HIST1H2BLQ99880 126 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 TMEM140Q9NV12 185 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 CALYQ9NYX4 217 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 F6UZH7 168 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 GALR2O43603 387 aaPredicted RBP13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 DEFA4P12838 97 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 GLRXP35754 106 aa13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 PACRGQ96M98 296 aaPredicted RBP13.28□□□□□ -0.28
CHRNA7-221ENST00000636898 LOC400499M0QZD8 3231 aa13.27□□□□□ -0.28
CHRNA7-221ENST00000636898 TRAV38-1A0A0B4J264 116 aa13.27□□□□□ -0.28
CHRNA7-221ENST00000636898 RRHO14718 337 aa13.27□□□□□ -0.28
CHRNA7-221ENST00000636898 EDDM3BP56851 147 aa13.27□□□□□ -0.28
CHRNA7-221ENST00000636898 KLF3P57682 345 aaPredicted RBP13.27□□□□□ -0.28
CHRNA7-221ENST00000636898 RTP5Q14D33 572 aa13.27□□□□□ -0.28
CHRNA7-221ENST00000636898 KCNIP4Q6PIL6 250 aa13.27□□□□□ -0.28
CHRNA7-221ENST00000636898 IGF2-ASQ6U949 168 aa13.27□□□□□ -0.28
CHRNA7-221ENST00000636898 ZNRF1Q8ND25 227 aa13.27□□□□□ -0.28
CHRNA7-221ENST00000636898 OR2T10Q8NGZ9 312 aa13.27□□□□□ -0.28
CHRNA7-221ENST00000636898 PLPPR2Q96GM1 343 aa13.27□□□□□ -0.28
CHRNA7-221ENST00000636898 ACY3Q96HD9 319 aa13.27□□□□□ -0.28
CHRNA7-221ENST00000636898 PRDM13Q9H4Q3 707 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms