RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 LINC00473A8K010 186 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 H3BS24 57 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 H3BUX3 64 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 TRIM77I1YAP6 450 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 MPPED1O15442 326 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 IGHV3-7P01780 117 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 RLN1P04808 185 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 IL5P05113 134 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 SERPINE2P07093 398 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 SNRNP70P08621 437 aaKnown RBP5.38□□□□□ -1.55
UPF3B-205ENST00000636792 NQO2P16083 231 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 TMEM11P17152 192 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 IFITM3Q01628 133 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 VMA21Q3ZAQ7 101 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 UTF1Q5T230 341 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 THOC7Q6I9Y2 204 aaKnown RBP5.38□□□□□ -1.55
UPF3B-205ENST00000636792 FAM53AQ6NSI3 398 aaPredicted RBP5.38□□□□□ -1.55
UPF3B-205ENST00000636792 C5orf24Q7Z6I8 188 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 MOB3BQ86TA1 216 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 TBC1D26Q86UD7 250 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 PDZD9Q8IXQ8 264 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 SPAG16Q8N0X2 631 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 ZNF383Q8NA42 475 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 NPBQ8NG41 125 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 C5orf30Q96GV9 206 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 HARBI1Q96MB7 349 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 RBM14Q96PK6 669 aaKnown RBP5.38□□□□□ -1.55
UPF3B-205ENST00000636792 RTBDNQ9BSG5 229 aaPredicted RBP5.38□□□□□ -1.55
UPF3B-205ENST00000636792 MARVELD1Q9BSK0 173 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 TMEM222Q9H0R3 208 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 NUDT15Q9NV35 164 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 BET1LQ9NYM9 111 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 KIAA1456Q9P272 454 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 SHPKQ9UHJ6 478 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 VSIG4Q9Y279 399 aa5.38□□□□□ -1.55
UPF3B-205ENST00000636792 FN1P02751 2386 aaKnown RBP5.37□□□□□ -1.55
UPF3B-205ENST00000636792 IGHV3OR16-10A0A075B7F0 116 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 A0A1W2PRD5 423 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 A0A1W2PRF3 423 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 A0A1W2PRM7 423 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 A6NDX4 124 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 DNAJC9-AS1A6NH13 148 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 SNRPGP15A8MWD9 76 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 H7C2Y5 167 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 SHOXO15266 292 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 NBR2O15453 112 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 KCNAB3O43448 404 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 SFT2D2O95562 160 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 DUS4LO95620 317 aaKnown RBP5.37□□□□□ -1.55
UPF3B-205ENST00000636792 DHFRP00374 187 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 IGKV1D-33P01593 117 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 IGKV1-33P01594 117 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 MAS1LP35410 378 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 REG1BP48304 166 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 CCR6P51684 374 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 UBE2KP61086 200 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 ERVK-16P61578 105 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 BAMBIQ13145 260 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 DIAPH2-AS1Q14236 149 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 HES1Q14469 280 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 MMDQ15546 238 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 PHLDA2Q53GA4 152 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 IL17RELQ6ZVW7 336 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 LYG2Q86SG7 212 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 LGI3Q8N145 548 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 DYNAPQ8N1N2 210 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 FAM71E2Q8N5Q1 922 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 SIGLECL1Q8N7X8 197 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 TEX45Q8NA69 505 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 OR51H1Q8NH63 302 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 PIFOQ8TCI5 191 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 RBPMSQ93062 196 aaKnown RBP5.37□□□□□ -1.55
UPF3B-205ENST00000636792 LSM10Q969L4 123 aaKnown RBP5.37□□□□□ -1.55
UPF3B-205ENST00000636792 TMEM230Q96A57 120 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 EAF1Q96JC9 268 aaPredicted RBP5.37□□□□□ -1.55
UPF3B-205ENST00000636792 TMEM56Q96MV1 263 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 ZNF48Q96MX3 618 aaPredicted RBP5.37□□□□□ -1.55
UPF3B-205ENST00000636792 SLC25A33Q9BSK2 321 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 NPFFR1Q9GZQ6 430 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 GPN1Q9HCN4 374 aaPredicted RBP5.37□□□□□ -1.55
UPF3B-205ENST00000636792 RNF150Q9ULK6 438 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 TMEM56-RWDD3S4R434 201 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 CELSR1Q9NYQ6 3014 aa5.37□□□□□ -1.55
UPF3B-205ENST00000636792 A0A1B0GUS0 222 aa5.36□□□□□ -1.55
UPF3B-205ENST00000636792 MARCH11A6NNE9 402 aa5.36□□□□□ -1.55
UPF3B-205ENST00000636792 RRHO14718 337 aa5.36□□□□□ -1.55
UPF3B-205ENST00000636792 ARPC1BO15143 372 aaKnown RBP5.36□□□□□ -1.55
UPF3B-205ENST00000636792 HOXA3O43365 443 aaPredicted RBP5.36□□□□□ -1.55
UPF3B-205ENST00000636792 TNFSF12O43508 249 aa5.36□□□□□ -1.55
UPF3B-205ENST00000636792 FCGR3BO75015 233 aa5.36□□□□□ -1.55
UPF3B-205ENST00000636792 CDS2O95674 445 aa5.36□□□□□ -1.55
UPF3B-205ENST00000636792 LY86O95711 162 aa5.36□□□□□ -1.55
UPF3B-205ENST00000636792 CRYZL1O95825 349 aa5.36□□□□□ -1.55
UPF3B-205ENST00000636792 HLA-AP01891 365 aaKnown RBP5.36□□□□□ -1.55
UPF3B-205ENST00000636792 HLA-DRB1P01911 266 aa5.36□□□□□ -1.55
UPF3B-205ENST00000636792 IGKV1-16P04430 117 aa5.36□□□□□ -1.55
UPF3B-205ENST00000636792 OR5AC1P0C628 307 aa5.36□□□□□ -1.55
UPF3B-205ENST00000636792 OR4E1P0C645 316 aa5.36□□□□□ -1.55
UPF3B-205ENST00000636792 SLC25A6P12236 298 aa5.36□□□□□ -1.55
UPF3B-205ENST00000636792 VDAC1P21796 283 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms