RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 IL17BQ9UHF5 180 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 FUT9Q9Y231 359 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 SPTBN2O15020 2390 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 DOCK11Q5JSL3 2073 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 IGHV3-64DA0A0J9YX35 117 aa12.1□□□□□ -0.47
CLN6-215ENST00000636674 A8MWP6 167 aa12.1□□□□□ -0.47
CLN6-215ENST00000636674 CCKARP32238 428 aa12.1□□□□□ -0.47
CLN6-215ENST00000636674 TMPRSS3P57727 454 aa12.1□□□□□ -0.47
CLN6-215ENST00000636674 RPL15P61313 204 aaKnown RBP12.1□□□□□ -0.47
CLN6-215ENST00000636674 SMIM21Q3B7S5 101 aa12.1□□□□□ -0.47
CLN6-215ENST00000636674 UNQ6494/PRO21346Q6UXR6 183 aa12.1□□□□□ -0.47
CLN6-215ENST00000636674 TMEM18Q96B42 140 aa12.1□□□□□ -0.47
CLN6-215ENST00000636674 QTRT1Q9BXR0 403 aaKnown RBP12.1□□□□□ -0.47
CLN6-215ENST00000636674 A0A1B0GWJ7 208 aa12.1□□□□□ -0.47
CLN6-215ENST00000636674 RBFOX2O43251 390 aaKnown RBP eCLIP12.1□□□□□ -0.47
CLN6-215ENST00000636674 RBMXL2O75526 392 aaKnown RBP12.1□□□□□ -0.47
CLN6-215ENST00000636674 LYZL6O75951 148 aa12.1□□□□□ -0.47
CLN6-215ENST00000636674 IL3RAP26951 378 aa12.1□□□□□ -0.47
CLN6-215ENST00000636674 DUTP33316 252 aaKnown RBP12.1□□□□□ -0.47
CLN6-215ENST00000636674 OPRK1P41145 380 aa12.1□□□□□ -0.47
CLN6-215ENST00000636674 SPCS3P61009 180 aa12.1□□□□□ -0.47
CLN6-215ENST00000636674 RPP30P78346 268 aaKnown RBP12.1□□□□□ -0.47
CLN6-215ENST00000636674 FOXF2Q12947 444 aa12.1□□□□□ -0.47
CLN6-215ENST00000636674 FOXL1Q12952 345 aa12.1□□□□□ -0.47
CLN6-215ENST00000636674 BEND2Q8NDZ0 799 aa12.1□□□□□ -0.47
CLN6-215ENST00000636674 C2orf88Q9BSF0 95 aa12.1□□□□□ -0.47
CLN6-215ENST00000636674 PRSS46E5RG02 174 aa12.09□□□□□ -0.47
CLN6-215ENST00000636674 ST8SIA5O15466 376 aa12.09□□□□□ -0.47
CLN6-215ENST00000636674 SPINT2O43291 252 aa12.09□□□□□ -0.47
CLN6-215ENST00000636674 HPRT1P00492 218 aa12.09□□□□□ -0.47
CLN6-215ENST00000636674 OR9G9P0C7N8 305 aa12.09□□□□□ -0.47
CLN6-215ENST00000636674 CD59P13987 128 aa12.09□□□□□ -0.47
CLN6-215ENST00000636674 CD82P27701 267 aa12.09□□□□□ -0.47
CLN6-215ENST00000636674 CNN1P51911 297 aaKnown RBP12.09□□□□□ -0.47
CLN6-215ENST00000636674 PIP4P1Q86T03 277 aa12.09□□□□□ -0.47
CLN6-215ENST00000636674 ZNF664Q8N3J9 261 aa12.09□□□□□ -0.47
CLN6-215ENST00000636674 TMEM178AQ8NBL3 297 aa12.09□□□□□ -0.47
CLN6-215ENST00000636674 C1orf162Q8NEQ5 155 aaPredicted RBP12.09□□□□□ -0.47
CLN6-215ENST00000636674 MEGF10Q96KG7 1140 aa12.09□□□□□ -0.47
CLN6-215ENST00000636674 PSG11Q9UQ72 335 aa12.09□□□□□ -0.47
CLN6-215ENST00000636674 DEFA4P12838 97 aa12.08□□□□□ -0.48
CLN6-215ENST00000636674 RPS16P62249 146 aaKnown RBP12.08□□□□□ -0.48
CLN6-215ENST00000636674 TRIP6Q15654 476 aaKnown RBP12.08□□□□□ -0.48
CLN6-215ENST00000636674 FAM214BQ7L5A3 538 aa12.08□□□□□ -0.48
CLN6-215ENST00000636674 CXorf67Q86X51 503 aaPredicted RBP12.08□□□□□ -0.48
CLN6-215ENST00000636674 NDUFAF3Q9BU61 184 aa12.08□□□□□ -0.48
CLN6-215ENST00000636674 METRNQ9UJH8 293 aa12.08□□□□□ -0.48
CLN6-215ENST00000636674 SLC31A2O15432 143 aa12.08□□□□□ -0.48
CLN6-215ENST00000636674 STAG3L2P0CL84 134 aa12.08□□□□□ -0.48
CLN6-215ENST00000636674 STAG3L3P0CL85 134 aa12.08□□□□□ -0.48
CLN6-215ENST00000636674 VDAC2P45880 294 aaPredicted RBP12.08□□□□□ -0.48
CLN6-215ENST00000636674 ATP5G3P48201 142 aa12.08□□□□□ -0.48
CLN6-215ENST00000636674 SPINK9Q5DT21 86 aa12.08□□□□□ -0.48
CLN6-215ENST00000636674 PRAMEF6Q5VXH4 476 aa12.08□□□□□ -0.48
CLN6-215ENST00000636674 GBGT1Q8N5D6 347 aa12.08□□□□□ -0.48
CLN6-215ENST00000636674 TMEM37Q8WXS4 190 aa12.08□□□□□ -0.48
CLN6-215ENST00000636674 JPT1Q9UK76 154 aa12.08□□□□□ -0.48
CLN6-215ENST00000636674 IGHV3-43A0A0B4J1X8 118 aa12.07□□□□□ -0.48
CLN6-215ENST00000636674 TRAV38-1A0A0B4J264 116 aa12.07□□□□□ -0.48
CLN6-215ENST00000636674 A0A1W2PPV4 95 aa12.07□□□□□ -0.48
CLN6-215ENST00000636674 PROP1O75360 226 aa12.07□□□□□ -0.48
CLN6-215ENST00000636674 IGHG3P01860 377 aa12.07□□□□□ -0.48
CLN6-215ENST00000636674 IGHV3-43DP0DP04 118 aa12.07□□□□□ -0.48
CLN6-215ENST00000636674 CHRNA7P36544 502 aa12.07□□□□□ -0.48
CLN6-215ENST00000636674 TAS2R60P59551 318 aa12.07□□□□□ -0.48
CLN6-215ENST00000636674 CR1LQ2VPA4 569 aa12.07□□□□□ -0.48
CLN6-215ENST00000636674 FAM78BQ5VT40 261 aa12.07□□□□□ -0.48
CLN6-215ENST00000636674 TREML4Q6UXN2 200 aa12.07□□□□□ -0.48
CLN6-215ENST00000636674 PXMP4Q9Y6I8 212 aa12.07□□□□□ -0.48
CLN6-215ENST00000636674 HCFC1P51610 2035 aa12.07□□□□□ -0.48
CLN6-215ENST00000636674 A0A1B0GV90 55 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 GPR12P47775 334 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 SOX8P57073 446 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 LINC00205P59089 165 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 ARG2P78540 354 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 CLEC12BQ2HXU8 276 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 GCSAMLQ5JQS6 135 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 PRAMEF5Q5TYX0 476 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 FAM90A1Q86YD7 464 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 GGTLC1Q9BX51 225 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 TRGV8A0A0C4DH27 118 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 TIMM8AO60220 97 aaPredicted RBP12.06□□□□□ -0.48
CLN6-215ENST00000636674 YPEL1O60688 119 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 NDUFB4O95168 129 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 CXorf1O96002 111 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 CRYAAP02489 173 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 HOXC12P31275 282 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 HOXA4Q00056 320 aaPredicted RBP12.06□□□□□ -0.48
CLN6-215ENST00000636674 IQCJQ1A5X6 159 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 MBNL2Q5VZF2 373 aaKnown RBP12.06□□□□□ -0.48
CLN6-215ENST00000636674 C1orf174Q8IYL3 243 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 CD177Q8N6Q3 437 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 TPRX1Q8N7U7 411 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 DEFB124Q8NES8 71 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 Q8TCH9 128 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 SFRP2Q96HF1 295 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 YPEL2Q96QA6 119 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 MGST2Q99735 147 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 TP53TG5Q9Y2B4 290 aa12.06□□□□□ -0.48
CLN6-215ENST00000636674 TRAV9-1A0A075B6T8 112 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms