RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 METTL1Q9UBP6 276 aaKnown RBP12.06□□□□□ -0.48
GABRB3-219ENST00000636466 MIOXQ9UGB7 285 aa12.06□□□□□ -0.48
GABRB3-219ENST00000636466 LRRK1Q38SD2 2015 aa12.06□□□□□ -0.48
GABRB3-219ENST00000636466 SMPD2O60906 423 aa12.06□□□□□ -0.48
GABRB3-219ENST00000636466 IGFBP3P17936 291 aaPredicted RBP12.06□□□□□ -0.48
GABRB3-219ENST00000636466 OR5AU1Q8NGC0 362 aa12.06□□□□□ -0.48
GABRB3-219ENST00000636466 STARD4Q96DR4 205 aa12.06□□□□□ -0.48
GABRB3-219ENST00000636466 PAXXQ9BUH6 204 aa12.06□□□□□ -0.48
GABRB3-219ENST00000636466 IFT22Q9H7X7 185 aa12.06□□□□□ -0.48
GABRB3-219ENST00000636466 RABAC1Q9UI14 185 aa12.06□□□□□ -0.48
GABRB3-219ENST00000636466 IGSF23A1L1A6 192 aa12.06□□□□□ -0.48
GABRB3-219ENST00000636466 CGB1A6NKQ9 187 aa12.06□□□□□ -0.48
GABRB3-219ENST00000636466 CD40P25942 277 aa12.06□□□□□ -0.48
GABRB3-219ENST00000636466 SRP14P37108 136 aaKnown RBP12.06□□□□□ -0.48
GABRB3-219ENST00000636466 ASCL5Q7RTU5 278 aa12.06□□□□□ -0.48
GABRB3-219ENST00000636466 OR1L6Q8NGR2 347 aa12.06□□□□□ -0.48
GABRB3-219ENST00000636466 WBP1Q96G27 269 aa12.06□□□□□ -0.48
GABRB3-219ENST00000636466 PTGDSP41222 190 aa12.05□□□□□ -0.48
GABRB3-219ENST00000636466 LHX2P50458 406 aa12.05□□□□□ -0.48
GABRB3-219ENST00000636466 SMUG1Q53HV7 270 aa12.05□□□□□ -0.48
GABRB3-219ENST00000636466 OR13A1Q8NGR1 328 aa12.05□□□□□ -0.48
GABRB3-219ENST00000636466 IGHV3OR16-13A0A075B7E8 117 aa12.05□□□□□ -0.48
GABRB3-219ENST00000636466 LOC102723996A0A087X1L8 192 aa12.05□□□□□ -0.48
GABRB3-219ENST00000636466 IGHV3-74A0A0B4J1X5 117 aa12.05□□□□□ -0.48
GABRB3-219ENST00000636466 RNF224P0DH78 156 aa12.05□□□□□ -0.48
GABRB3-219ENST00000636466 LINC00470Q9BZP3 86 aa12.05□□□□□ -0.48
GABRB3-219ENST00000636466 GOLT1BQ9Y3E0 138 aa12.05□□□□□ -0.48
GABRB3-219ENST00000636466 S4R3C0 116 aa12.05□□□□□ -0.48
GABRB3-219ENST00000636466 NCOR2Q9Y618 2525 aa12.05□□□□□ -0.48
GABRB3-219ENST00000636466 CLDN18P56856 261 aa12.05□□□□□ -0.48
GABRB3-219ENST00000636466 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.05□□□□□ -0.48
GABRB3-219ENST00000636466 C17orf82Q86X59 251 aaPredicted RBP12.05□□□□□ -0.48
GABRB3-219ENST00000636466 DPF1Q92782 380 aa12.05□□□□□ -0.48
GABRB3-219ENST00000636466 PERPQ96FX8 193 aa12.05□□□□□ -0.48
GABRB3-219ENST00000636466 POM121Q96HA1 1249 aa12.05□□□□□ -0.48
GABRB3-219ENST00000636466 HSPE1P61604 102 aaKnown RBP12.05□□□□□ -0.48
GABRB3-219ENST00000636466 C5orf24Q7Z6I8 188 aa12.05□□□□□ -0.48
GABRB3-219ENST00000636466 ZNF596Q8TC21 504 aa12.05□□□□□ -0.48
GABRB3-219ENST00000636466 IGKV1D-13A0A0B4J2D9 117 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 C17orf98A8MV24 154 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 HYPMO75409 117 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 PGA5P0DJD9 388 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 IGKV1-13P0DP09 117 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 HLA-DRB5Q30154 266 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 PRNTQ86SH4 94 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 KLHDC1Q8N7A1 406 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 IL19Q9UHD0 177 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 PDE6DO43924 150 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 HOXA6P31267 233 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 TFPI2P48307 235 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 WFIKKN1Q96NZ8 548 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 RNF222A6NCQ9 220 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 FXYD3Q14802 87 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 SAXO1Q8IYX7 474 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 MUC15Q8N387 334 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 P2RX4Q99571 388 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 IDI2-AS1Q9NZ38 188 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 RNF115Q9Y4L5 304 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 SCN8AQ9UQD0 1980 aa12.04□□□□□ -0.48
GABRB3-219ENST00000636466 PPIAL4CA0A0B4J2A2 164 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 ZNF716A6NP11 495 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 CD8AP01732 235 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 PPIAL4GP0DN37 164 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 HOXB1P14653 301 aaPredicted RBP12.03□□□□□ -0.48
GABRB3-219ENST00000636466 GLRXP35754 106 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 RTN4RL2Q86UN3 420 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 GCSAMQ8N6F7 178 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 ZIC4Q8N9L1 334 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 C1QTNF5Q9BXJ0 243 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 QTRT1Q9BXR0 403 aaKnown RBP12.03□□□□□ -0.48
GABRB3-219ENST00000636466 CHODLQ9H9P2 273 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 ZDHHC8Q9ULC8 765 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 M0R2Z0 102 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 ZNF883P0CG24 379 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 SRSF6Q13247 344 aaKnown RBP12.03□□□□□ -0.48
GABRB3-219ENST00000636466 FAM162BQ5T6X4 162 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 ABLIM2Q6H8Q1 611 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 ZNF343Q6P1L6 599 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 WDYHV1Q96HA8 205 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 MEGF10Q96KG7 1140 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 SCNM1Q9BWG6 230 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 DOCK11Q5JSL3 2073 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 TRAV14DV4A0A0A6YYC5 116 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 PGPA6NDG6 321 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 WISP1O95388 367 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 CD59P13987 128 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 DOLPP1Q86YN1 238 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 NPIPB3Q92617 1050 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 ANAPC16Q96DE5 110 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 PAM16Q9Y3D7 125 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 B4DEV8 164 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 RRHO14718 337 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 KIAA1644Q3SXP7 199 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 ATRAIDQ6UW56 229 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 TMEM45BQ96B21 275 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 TM2D1Q9BX74 207 aa12.03□□□□□ -0.48
GABRB3-219ENST00000636466 UCNP55089 124 aa12.02□□□□□ -0.48
GABRB3-219ENST00000636466 IGHV3OR16-8A0A075B7F1 116 aa12.02□□□□□ -0.49
GABRB3-219ENST00000636466 ZNF98A6NK75 572 aa12.02□□□□□ -0.49
GABRB3-219ENST00000636466 NTN3O00634 580 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms