RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	LCN2	P80188	198 aa		12.12	□□□□□ -0.47
NEDD4L-238	ENST00000635997	RNFT1	Q5M7Z0	435 aa		12.12	□□□□□ -0.47
NEDD4L-238	ENST00000635997	TMEM252	Q8N6L7	170 aa		12.12	□□□□□ -0.47
NEDD4L-238	ENST00000635997	GGACT	Q9BVM4	153 aa		12.12	□□□□□ -0.47
NEDD4L-238	ENST00000635997	REG4	Q9BYZ8	158 aa		12.12	□□□□□ -0.47
NEDD4L-238	ENST00000635997	PF4V1	P10720	104 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	P2RY1	P47900	373 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	RPL39P5	Q59GN2	51 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	ZNF385C	Q66K41	422 aa	Predicted RBP	12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	ZNF788	Q6ZQV5	615 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	ZNF818P	Q6ZRF7	136 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	TMEM37	Q8WXS4	190 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	TMEM208	Q9BTX3	173 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	SLC45A2	Q9UMX9	530 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	CLDN16	Q9Y5I7	305 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997		A0A1B0GU03	582 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	HLA-G	P17693	338 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	HTR1D	P28221	377 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	PTGDS	P41222	190 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	ZBTB34	Q8NCN2	500 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	PRORY	Q9H606	182 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	PCNT	O95613	3336 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	HPRT1	P00492	218 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	LRP11	Q86VZ4	500 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	MS4A10	Q96PG2	267 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	TMEM222	Q9H0R3	208 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	HSF4	Q9ULV5	492 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	ANAPC1	Q9H1A4	1944 aa		12.11	□□□□□ -0.47
NEDD4L-238	ENST00000635997	IGLV3-32	A0A0A0MS00	114 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	C12orf77	C9JDV5	145 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	S1PR2	O95136	353 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	BTC	P35070	178 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	AARD	Q4LEZ3	155 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	WDR31	Q8NA23	367 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	VOPP1	Q96AW1	172 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	ATP5S	Q99766	215 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	C1QTNF5	Q9BXJ0	243 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	ALX4	Q9H161	411 aa	Predicted RBP	12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	METTL1	Q9UBP6	276 aa	Known RBP	12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997		G3V3Q6	166 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	TM4SF5	O14894	197 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	FBP1	P09467	338 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	TCL1A	P56279	114 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	GPR146	Q96CH1	333 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	RABAC1	Q9UI14	185 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	DMRT1	Q9Y5R6	373 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	LOC390937	A0A1W2PQ73	354 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	TFPI2	P48307	235 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	CCDC144NL	Q6NUI1	221 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	PAQR4	Q8N4S7	273 aa	Predicted RBP	12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	OR52M1	Q8NGK5	317 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	MRPL37	Q9BZE1	423 aa	Known RBP	12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	LOC105371242	A0A075B767	164 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	CCL3L1	P16619	93 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	SRD5A1	P18405	259 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	DRAM1	Q8N682	238 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	SLC25A28	Q96A46	364 aa		12.1	□□□□□ -0.47
NEDD4L-238	ENST00000635997	SEC14L6	B5MCN3	397 aa		12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	MBP	P02686	304 aa	Predicted RBP	12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	C2orf68	Q2NKX9	166 aa		12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	FAM166A	Q6J272	317 aa		12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	OR13A1	Q8NGR1	328 aa		12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	FAM216A	Q8WUB2	273 aa		12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	VPS25	Q9BRG1	176 aa		12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	NPDC1	Q9NQX5	325 aa	Predicted RBP	12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	IFNL4	K9M1U5	179 aa		12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	CAMP	P49913	170 aa		12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	DHRS7B	Q6IAN0	325 aa	Predicted RBP	12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	ZNF843	Q8N446	348 aa		12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	SLC24A4	Q8NFF2	622 aa		12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	P2RX4	Q99571	388 aa		12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	ZDHHC11	Q9H8X9	412 aa		12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	IDI2-AS1	Q9NZ38	188 aa		12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	LRRK1	Q38SD2	2015 aa		12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	MARCH11	A6NNE9	402 aa		12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	DDT	P30046	118 aa		12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	KIR2DL2	P43627	348 aa	Predicted RBP	12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	FAM103A1	Q9BTL3	118 aa	Known RBP	12.09	□□□□□ -0.47
NEDD4L-238	ENST00000635997	IGHV3OR16-13	A0A075B7E8	117 aa		12.08	□□□□□ -0.47
NEDD4L-238	ENST00000635997	IGHV3-74	A0A0B4J1X5	117 aa		12.08	□□□□□ -0.47
NEDD4L-238	ENST00000635997	ZNF729	A6NN14	1252 aa	Predicted RBP	12.08	□□□□□ -0.47
NEDD4L-238	ENST00000635997	SLC31A2	O15432	143 aa		12.08	□□□□□ -0.47
NEDD4L-238	ENST00000635997	PAGE4	O60829	102 aa		12.08	□□□□□ -0.47
NEDD4L-238	ENST00000635997	PF4	P02776	101 aa		12.08	□□□□□ -0.47
NEDD4L-238	ENST00000635997	USF1	P22415	310 aa	Predicted RBP	12.08	□□□□□ -0.47
NEDD4L-238	ENST00000635997	PKIA	P61925	76 aa		12.08	□□□□□ -0.47
NEDD4L-238	ENST00000635997	ATP6V1F	Q16864	119 aa		12.08	□□□□□ -0.47
NEDD4L-238	ENST00000635997	C12orf54	Q6X4T0	127 aa		12.08	□□□□□ -0.47
NEDD4L-238	ENST00000635997	ACP7	Q6ZNF0	438 aa		12.08	□□□□□ -0.47
NEDD4L-238	ENST00000635997	LYZL4	Q96KX0	146 aa		12.08	□□□□□ -0.47
NEDD4L-238	ENST00000635997	LPAR3	Q9UBY5	353 aa		12.08	□□□□□ -0.47
NEDD4L-238	ENST00000635997	TNFSF18	Q9UNG2	199 aa		12.08	□□□□□ -0.47
NEDD4L-238	ENST00000635997	HELZ	P42694	1942 aa	Known RBP	12.08	□□□□□ -0.47
NEDD4L-238	ENST00000635997	PKD1L2	Q7Z442	2459 aa		12.08	□□□□□ -0.47
NEDD4L-238	ENST00000635997	FREM1	Q5H8C1	2179 aa		12.08	□□□□□ -0.48
NEDD4L-238	ENST00000635997	CD99	P14209	185 aa		12.08	□□□□□ -0.48
NEDD4L-238	ENST00000635997	CD24	P25063	80 aa		12.08	□□□□□ -0.48
NEDD4L-238	ENST00000635997	RAN	P62826	216 aa	Known RBP	12.08	□□□□□ -0.48
NEDD4L-238	ENST00000635997	RPL8	P62917	257 aa	Known RBP	12.08	□□□□□ -0.48
NEDD4L-238	ENST00000635997	KCNMB1	Q16558	191 aa		12.08	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms