RNA–Protein interactions for RNA: ENST00000635895.1

CACNA1A-218, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-218ENST00000635895 PRF1P14222 555 aa16.81■□□□□ 0.28
CACNA1A-218ENST00000635895 GGTLC2Q14390 218 aa16.81■□□□□ 0.28
CACNA1A-218ENST00000635895 AURKAIP1Q9NWT8 199 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-218ENST00000635895 SIPA1L3O60292 1781 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-218ENST00000635895 TDGF1P13385 188 aa16.81■□□□□ 0.28
CACNA1A-218ENST00000635895 ISXQ2M1V0 245 aa16.81■□□□□ 0.28
CACNA1A-218ENST00000635895 LYZL2Q7Z4W2 148 aa16.81■□□□□ 0.28
CACNA1A-218ENST00000635895 GCSAMQ8N6F7 178 aa16.81■□□□□ 0.28
CACNA1A-218ENST00000635895 AMER3Q8N944 861 aa16.81■□□□□ 0.28
CACNA1A-218ENST00000635895 EEF1AKMT3Q96AZ1 226 aa16.81■□□□□ 0.28
CACNA1A-218ENST00000635895 hCG_38984A0A1B0GV85 526 aa16.81■□□□□ 0.28
CACNA1A-218ENST00000635895 TNRC6CQ9HCJ0 1690 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-218ENST00000635895 NPIPB4C9JG80 1138 aa16.8■□□□□ 0.28
CACNA1A-218ENST00000635895 ZNF257Q9Y2Q1 563 aa16.8■□□□□ 0.28
CACNA1A-218ENST00000635895 SEC11AP67812 179 aa16.8■□□□□ 0.28
CACNA1A-218ENST00000635895 MZB1Q8WU39 189 aa16.8■□□□□ 0.28
CACNA1A-218ENST00000635895 PTPN13Q12923 2485 aa16.8■□□□□ 0.28
CACNA1A-218ENST00000635895 MRPL20Q9BYC9 149 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-218ENST00000635895 DUX5Q96PT3 197 aa16.8■□□□□ 0.28
CACNA1A-218ENST00000635895 SOSTQ9BQB4 213 aa16.8■□□□□ 0.28
CACNA1A-218ENST00000635895 PHF7Q9BWX1 381 aaPredicted RBP16.8■□□□□ 0.28
CACNA1A-218ENST00000635895 ACER2Q5QJU3 275 aa16.8■□□□□ 0.28
CACNA1A-218ENST00000635895 CADM4Q8NFZ8 388 aa16.8■□□□□ 0.28
CACNA1A-218ENST00000635895 CTSSP25774 331 aa16.8■□□□□ 0.28
CACNA1A-218ENST00000635895 MORN3Q6PF18 240 aaPredicted RBP16.8■□□□□ 0.28
CACNA1A-218ENST00000635895 TMEM222Q9H0R3 208 aa16.8■□□□□ 0.28
CACNA1A-218ENST00000635895 TMEFF2Q9UIK5 374 aaPredicted RBP16.8■□□□□ 0.28
CACNA1A-218ENST00000635895 TNFSF14O43557 240 aa16.79■□□□□ 0.28
CACNA1A-218ENST00000635895 IFI27P40305 119 aaPredicted RBP16.79■□□□□ 0.28
CACNA1A-218ENST00000635895 ATP5G2Q06055 141 aa16.79■□□□□ 0.28
CACNA1A-218ENST00000635895 IGF2P01344 180 aa16.79■□□□□ 0.28
CACNA1A-218ENST00000635895 IGKV3OR2-268A0A0C4DH90 116 aa16.79■□□□□ 0.28
CACNA1A-218ENST00000635895 RPL32P62910 135 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-218ENST00000635895 HOGA1Q86XE5 327 aa16.79■□□□□ 0.28
CACNA1A-218ENST00000635895 VGLL1Q99990 258 aa16.79■□□□□ 0.28
CACNA1A-218ENST00000635895 SONP18583 2426 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-218ENST00000635895 OGG1O15527 345 aa16.79■□□□□ 0.28
CACNA1A-218ENST00000635895 CDIPTO14735 213 aa16.78■□□□□ 0.28
CACNA1A-218ENST00000635895 TAF15Q92804 592 aaKnown RBP eCLIP16.78■□□□□ 0.28
CACNA1A-218ENST00000635895 TUBA4BQ9H853 241 aa16.78■□□□□ 0.28
CACNA1A-218ENST00000635895 IGHV3-13P01766 116 aa16.78■□□□□ 0.28
CACNA1A-218ENST00000635895 IGHV3-7P01780 117 aa16.78■□□□□ 0.28
CACNA1A-218ENST00000635895 IGHV3OR16-12A0A075B7B8 117 aa16.78■□□□□ 0.28
CACNA1A-218ENST00000635895 EFNB2P52799 333 aa16.78■□□□□ 0.28
CACNA1A-218ENST00000635895 APELAP0DMC3 54 aa16.78■□□□□ 0.28
CACNA1A-218ENST00000635895 RCC1P18754 421 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-218ENST00000635895 WIPI1Q5MNZ9 446 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-218ENST00000635895 DEFB103AP81534 67 aa16.78■□□□□ 0.28
CACNA1A-218ENST00000635895 FAM57AQ8TBR7 257 aa16.78■□□□□ 0.28
CACNA1A-218ENST00000635895 ZNF576Q9H609 170 aa16.78■□□□□ 0.28
CACNA1A-218ENST00000635895 FRMPD3Q5JV73 1810 aa16.78■□□□□ 0.28
CACNA1A-218ENST00000635895 SPEM1Q8N4L4 309 aa16.78■□□□□ 0.28
CACNA1A-218ENST00000635895 POC1AQ8NBT0 407 aa16.78■□□□□ 0.28
CACNA1A-218ENST00000635895 TBL2Q9Y4P3 447 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-218ENST00000635895 C21orf140B9A014 251 aa16.77■□□□□ 0.28
CACNA1A-218ENST00000635895 EIF3GO75821 320 aaKnown RBP eCLIP16.77■□□□□ 0.28
CACNA1A-218ENST00000635895 NPPCP23582 126 aa16.77■□□□□ 0.28
CACNA1A-218ENST00000635895 OR11H7Q8NGC8 314 aa16.77■□□□□ 0.28
CACNA1A-218ENST00000635895 SSTR5P35346 364 aa16.77■□□□□ 0.28
CACNA1A-218ENST00000635895 SPEM2Q0P670 501 aa16.77■□□□□ 0.28
CACNA1A-218ENST00000635895 C6orf106Q9H6K1 298 aaPredicted RBP16.77■□□□□ 0.28
CACNA1A-218ENST00000635895 CCL28Q9NRJ3 127 aa16.77■□□□□ 0.28
CACNA1A-218ENST00000635895 ZNF415Q09FC8 603 aa16.77■□□□□ 0.28
CACNA1A-218ENST00000635895 GAGE13Q4V321 117 aa16.77■□□□□ 0.28
CACNA1A-218ENST00000635895 ZNF585BQ52M93 769 aa16.77■□□□□ 0.28
CACNA1A-218ENST00000635895 APOBEC4Q8WW27 367 aaKnown RBP16.77■□□□□ 0.28
CACNA1A-218ENST00000635895 CNRIP1Q96F85 164 aaPredicted RBP16.77■□□□□ 0.28
CACNA1A-218ENST00000635895 CXorf66Q5JRM2 361 aaPredicted RBP16.77■□□□□ 0.27
CACNA1A-218ENST00000635895 ADAD2Q8NCV1 583 aaKnown RBP16.77■□□□□ 0.27
CACNA1A-218ENST00000635895 HMGCLL1Q8TB92 370 aa16.77■□□□□ 0.27
CACNA1A-218ENST00000635895 OTX1P32242 354 aaPredicted RBP16.77■□□□□ 0.27
CACNA1A-218ENST00000635895 PNLIPP16233 465 aa16.76■□□□□ 0.27
CACNA1A-218ENST00000635895 ZNF818PQ6ZRF7 136 aa16.76■□□□□ 0.27
CACNA1A-218ENST00000635895 CST9LQ9H4G1 147 aa16.76■□□□□ 0.27
CACNA1A-218ENST00000635895 VWA8A3KMH1 1905 aa16.76■□□□□ 0.27
CACNA1A-218ENST00000635895 PGPA6NDG6 321 aa16.76■□□□□ 0.27
CACNA1A-218ENST00000635895 TMEM238C9JI98 176 aa16.76■□□□□ 0.27
CACNA1A-218ENST00000635895 ZNF658BQ4V348 819 aaPredicted RBP16.76■□□□□ 0.27
CACNA1A-218ENST00000635895 LILRA3Q8N6C8 439 aaPredicted RBP16.76■□□□□ 0.27
CACNA1A-218ENST00000635895 OPN3Q9H1Y3 402 aaPredicted RBP16.76■□□□□ 0.27
CACNA1A-218ENST00000635895 ZNF729A6NN14 1252 aaPredicted RBP16.76■□□□□ 0.27
CACNA1A-218ENST00000635895 LINC00518Q8N0U6 118 aa16.76■□□□□ 0.27
CACNA1A-218ENST00000635895 MARVELD3Q96A59 401 aa16.76■□□□□ 0.27
CACNA1A-218ENST00000635895 CITED1Q99966 193 aa16.76■□□□□ 0.27
CACNA1A-218ENST00000635895 MEGF9Q9H1U4 602 aa16.76■□□□□ 0.27
CACNA1A-218ENST00000635895 CLDN14O95500 239 aa16.75■□□□□ 0.27
CACNA1A-218ENST00000635895 IGHV4-39P01824 125 aa16.75■□□□□ 0.27
CACNA1A-218ENST00000635895 CGB1A6NKQ9 187 aa16.75■□□□□ 0.27
CACNA1A-218ENST00000635895 M0R2P5 195 aa16.75■□□□□ 0.27
CACNA1A-218ENST00000635895 DMKNQ6E0U4 476 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-218ENST00000635895 GOLT1AQ6ZVE7 132 aa16.75■□□□□ 0.27
CACNA1A-218ENST00000635895 TRAV12-3A0A0B4J271 114 aa16.75■□□□□ 0.27
CACNA1A-218ENST00000635895 A0A0G2JLM5 398 aa16.75■□□□□ 0.27
CACNA1A-218ENST00000635895 RTN4RQ9BZR6 473 aa16.75■□□□□ 0.27
CACNA1A-218ENST00000635895 F8WEM9 126 aa16.75■□□□□ 0.27
CACNA1A-218ENST00000635895 DXOO77932 396 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-218ENST00000635895 PEX7O00628 323 aa16.75■□□□□ 0.27
CACNA1A-218ENST00000635895 CIARTQ8N365 385 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-218ENST00000635895 FAM90A10PA6NDY2 464 aa16.74■□□□□ 0.27
CACNA1A-218ENST00000635895 FAM90A18PA6NE21 464 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms