RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 C10orf55Q5SWW7 151 aa11.69□□□□□ -0.54
PDLIM3-213ENST00000629667 MMD2Q8IY49 270 aa11.69□□□□□ -0.54
PDLIM3-213ENST00000629667 RPP25LQ8N5L8 163 aaKnown RBP11.69□□□□□ -0.54
PDLIM3-213ENST00000629667 BPIFB6Q8NFQ5 453 aa11.69□□□□□ -0.54
PDLIM3-213ENST00000629667 GINS4Q9BRT9 223 aa11.69□□□□□ -0.54
PDLIM3-213ENST00000629667 DCUN1D5Q9BTE7 237 aa11.69□□□□□ -0.54
PDLIM3-213ENST00000629667 CABLES2Q9BTV7 478 aa11.69□□□□□ -0.54
PDLIM3-213ENST00000629667 MLXQ9UH92 298 aa11.69□□□□□ -0.54
PDLIM3-213ENST00000629667 FBXL7Q9UJT9 491 aa11.69□□□□□ -0.54
PDLIM3-213ENST00000629667 ZNF257Q9Y2Q1 563 aa11.69□□□□□ -0.54
PDLIM3-213ENST00000629667 LINC00473A8K010 186 aa11.68□□□□□ -0.54
PDLIM3-213ENST00000629667 IGHV3-23P01764 117 aa11.68□□□□□ -0.54
PDLIM3-213ENST00000629667 UCHL1P09936 223 aa11.68□□□□□ -0.54
PDLIM3-213ENST00000629667 SAA1P0DJI8 122 aaPredicted RBP11.68□□□□□ -0.54
PDLIM3-213ENST00000629667 BMI1P35226 326 aa11.68□□□□□ -0.54
PDLIM3-213ENST00000629667 ARL3P36405 182 aa11.68□□□□□ -0.54
PDLIM3-213ENST00000629667 EWSR1Q01844 656 aaKnown RBP eCLIP11.68□□□□□ -0.54
PDLIM3-213ENST00000629667 TNFRSF9Q07011 255 aa11.68□□□□□ -0.54
PDLIM3-213ENST00000629667 RAB11BQ15907 218 aa11.68□□□□□ -0.54
PDLIM3-213ENST00000629667 FAM106AQ4KMX7 169 aa11.68□□□□□ -0.54
PDLIM3-213ENST00000629667 TM4SF20Q53R12 229 aa11.68□□□□□ -0.54
PDLIM3-213ENST00000629667 CLEC19AQ6UXS0 136 aa11.68□□□□□ -0.54
PDLIM3-213ENST00000629667 LYG2Q86SG7 212 aa11.68□□□□□ -0.54
PDLIM3-213ENST00000629667 WFDC3Q8IUB2 231 aa11.68□□□□□ -0.54
PDLIM3-213ENST00000629667 C8orf59Q8N0T1 100 aaPredicted RBP11.68□□□□□ -0.54
PDLIM3-213ENST00000629667 UXS1Q8NBZ7 420 aa11.68□□□□□ -0.54
PDLIM3-213ENST00000629667 MND1Q9BWT6 205 aa11.68□□□□□ -0.54
PDLIM3-213ENST00000629667 PLCXD1Q9NUJ7 323 aa11.68□□□□□ -0.54
PDLIM3-213ENST00000629667 AK6Q9Y3D8 172 aaKnown RBP11.68□□□□□ -0.54
PDLIM3-213ENST00000629667 TMEM213A2RRL7 107 aa11.67□□□□□ -0.54
PDLIM3-213ENST00000629667 DPPA5A6NC42 116 aa11.67□□□□□ -0.54
PDLIM3-213ENST00000629667 HMX3A6NHT5 357 aa11.67□□□□□ -0.54
PDLIM3-213ENST00000629667 DENRO43583 198 aaKnown RBP11.67□□□□□ -0.54
PDLIM3-213ENST00000629667 SPRY2O43597 315 aa11.67□□□□□ -0.54
PDLIM3-213ENST00000629667 DIRAS3O95661 229 aa11.67□□□□□ -0.54
PDLIM3-213ENST00000629667 FCGR3AP08637 254 aa11.67□□□□□ -0.54
PDLIM3-213ENST00000629667 APOC4P55056 127 aa11.67□□□□□ -0.54
PDLIM3-213ENST00000629667 CLDN12P56749 244 aa11.67□□□□□ -0.54
PDLIM3-213ENST00000629667 OR4A47Q6IF82 309 aa11.67□□□□□ -0.54
PDLIM3-213ENST00000629667 LAIR2Q6ISS4 152 aa11.67□□□□□ -0.54
PDLIM3-213ENST00000629667 GFI1Q99684 422 aa11.67□□□□□ -0.54
PDLIM3-213ENST00000629667 TP53TG1Q9Y2A0 90 aa11.67□□□□□ -0.54
PDLIM3-213ENST00000629667 A8MWP6 167 aa11.66□□□□□ -0.54
PDLIM3-213ENST00000629667 CDK1P06493 297 aa11.66□□□□□ -0.54
PDLIM3-213ENST00000629667 C2orf76Q3KRA6 126 aa11.66□□□□□ -0.54
PDLIM3-213ENST00000629667 BTNL8Q6UX41 500 aa11.66□□□□□ -0.54
PDLIM3-213ENST00000629667 RBPMS2Q6ZRY4 209 aaKnown RBP11.66□□□□□ -0.54
PDLIM3-213ENST00000629667 Q6ZWC4 215 aa11.66□□□□□ -0.54
PDLIM3-213ENST00000629667 MAFIPQ8WZ33 124 aa11.66□□□□□ -0.54
PDLIM3-213ENST00000629667 TMEM203Q969S6 136 aa11.66□□□□□ -0.54
PDLIM3-213ENST00000629667 FAM3DQ96BQ1 224 aa11.66□□□□□ -0.54
PDLIM3-213ENST00000629667 RAB3CQ96E17 227 aa11.66□□□□□ -0.54
PDLIM3-213ENST00000629667 CCDC140Q96MF4 163 aa11.66□□□□□ -0.54
PDLIM3-213ENST00000629667 KCNK7Q9Y2U2 307 aa11.66□□□□□ -0.54
PDLIM3-213ENST00000629667 S4R3C0 116 aa11.66□□□□□ -0.54
PDLIM3-213ENST00000629667 NPIPB5A8MRT5 1133 aa11.65□□□□□ -0.54
PDLIM3-213ENST00000629667 FCGR3BO75015 233 aa11.65□□□□□ -0.54
PDLIM3-213ENST00000629667 DEDDO75618 318 aa11.65□□□□□ -0.54
PDLIM3-213ENST00000629667 GNAO1P09471 354 aa11.65□□□□□ -0.54
PDLIM3-213ENST00000629667 RANBP1P43487 201 aa11.65□□□□□ -0.54
PDLIM3-213ENST00000629667 SPHARQ15513 63 aa11.65□□□□□ -0.54
PDLIM3-213ENST00000629667 MED22Q15528 200 aa11.65□□□□□ -0.54
PDLIM3-213ENST00000629667 DEFB135Q30KP9 77 aa11.65□□□□□ -0.54
PDLIM3-213ENST00000629667 C19orf35Q6ZS72 473 aa11.65□□□□□ -0.54
PDLIM3-213ENST00000629667 OR1L6Q8NGR2 347 aa11.65□□□□□ -0.54
PDLIM3-213ENST00000629667 EEF1AKMT3Q96AZ1 226 aa11.65□□□□□ -0.54
PDLIM3-213ENST00000629667 FYTTD1Q96QD9 318 aaKnown RBP11.65□□□□□ -0.54
PDLIM3-213ENST00000629667 CENPOQ9BU64 300 aa11.65□□□□□ -0.54
PDLIM3-213ENST00000629667 OR51E2Q9H255 320 aa11.65□□□□□ -0.54
PDLIM3-213ENST00000629667 C8orf4Q9NR00 106 aa11.65□□□□□ -0.54
PDLIM3-213ENST00000629667 FKBP14Q9NWM8 211 aa11.65□□□□□ -0.54
PDLIM3-213ENST00000629667 DNAH10Q8IVF4 4471 aa11.65□□□□□ -0.54
PDLIM3-213ENST00000629667 TRAV25A0A0B4J276 109 aa11.64□□□□□ -0.55
PDLIM3-213ENST00000629667 TEX22C9J3V5 150 aa11.64□□□□□ -0.55
PDLIM3-213ENST00000629667 J3QRK9 145 aa11.64□□□□□ -0.55
PDLIM3-213ENST00000629667 ARL6IP5O75915 188 aa11.64□□□□□ -0.55
PDLIM3-213ENST00000629667 DHFRP00374 187 aa11.64□□□□□ -0.55
PDLIM3-213ENST00000629667 ATF4P18848 351 aaPredicted RBP11.64□□□□□ -0.55
PDLIM3-213ENST00000629667 RPL27AP46776 148 aaKnown RBP11.64□□□□□ -0.55
PDLIM3-213ENST00000629667 LIPKQ5VXJ0 399 aa11.64□□□□□ -0.55
PDLIM3-213ENST00000629667 KCTD9Q7L273 389 aa11.64□□□□□ -0.55
PDLIM3-213ENST00000629667 H1FOOQ8IZA3 346 aaPredicted RBP11.64□□□□□ -0.55
PDLIM3-213ENST00000629667 SLC38A6Q8IZM9 456 aa11.64□□□□□ -0.55
PDLIM3-213ENST00000629667 VKORC1L1Q8N0U8 176 aa11.64□□□□□ -0.55
PDLIM3-213ENST00000629667 PACRGLQ8N7B6 248 aa11.64□□□□□ -0.55
PDLIM3-213ENST00000629667 TMEM217Q8N7C4 229 aa11.64□□□□□ -0.55
PDLIM3-213ENST00000629667 UFD1Q92890 307 aa11.64□□□□□ -0.55
PDLIM3-213ENST00000629667 MARC2Q969Z3 335 aa11.64□□□□□ -0.55
PDLIM3-213ENST00000629667 RAB22AQ9UL26 194 aa11.64□□□□□ -0.55
PDLIM3-213ENST00000629667 MRPS7Q9Y2R9 242 aaKnown RBP11.64□□□□□ -0.55
PDLIM3-213ENST00000629667 PRELID3BQ9Y3B1 194 aa11.64□□□□□ -0.55
PDLIM3-213ENST00000629667 A0A075B6Q4 140 aa11.63□□□□□ -0.55
PDLIM3-213ENST00000629667 TMEM272A0A1B0GTI8 110 aa11.63□□□□□ -0.55
PDLIM3-213ENST00000629667 UBE2CO00762 179 aa11.63□□□□□ -0.55
PDLIM3-213ENST00000629667 GNB3P16520 340 aa11.63□□□□□ -0.55
PDLIM3-213ENST00000629667 GADD45AP24522 165 aa11.63□□□□□ -0.55
PDLIM3-213ENST00000629667 ZNF585BQ52M93 769 aa11.63□□□□□ -0.55
PDLIM3-213ENST00000629667 OR2B11Q5JQS5 317 aa11.63□□□□□ -0.55
PDLIM3-213ENST00000629667 LGALS9CQ6DKI2 356 aa11.63□□□□□ -0.55
PDLIM3-213ENST00000629667 OR2C3Q8N628 320 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms