RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 OVCH2Q7RTZ1 564 aa11.02□□□□□ -0.65
PNKP-223ENST00000629179 REC114Q7Z4M0 266 aa11.02□□□□□ -0.65
PNKP-223ENST00000629179 OR5M8Q8NGP6 311 aa11.02□□□□□ -0.65
PNKP-223ENST00000629179 OR1N2Q8NGR9 330 aa11.02□□□□□ -0.65
PNKP-223ENST00000629179 MCRIP2Q9BUT9 160 aaKnown RBP11.02□□□□□ -0.65
PNKP-223ENST00000629179 ZNF355PQ9NSJ1 428 aa11.02□□□□□ -0.65
PNKP-223ENST00000629179 EHFQ9NZC4 300 aa11.02□□□□□ -0.65
PNKP-223ENST00000629179 IGHV3-11P01762 117 aa11.01□□□□□ -0.65
PNKP-223ENST00000629179 APELAP0DMC3 54 aa11.01□□□□□ -0.65
PNKP-223ENST00000629179 ZNF182P17025 639 aaPredicted RBP11.01□□□□□ -0.65
PNKP-223ENST00000629179 TPPP2P59282 170 aa11.01□□□□□ -0.65
PNKP-223ENST00000629179 TNXAQ16473 311 aa11.01□□□□□ -0.65
PNKP-223ENST00000629179 ASPHD1Q5U4P2 390 aa11.01□□□□□ -0.65
PNKP-223ENST00000629179 PYHIN1Q6K0P9 492 aa11.01□□□□□ -0.65
PNKP-223ENST00000629179 MZT2AQ6P582 158 aa11.01□□□□□ -0.65
PNKP-223ENST00000629179 ZNF66Q6ZN08 573 aa11.01□□□□□ -0.65
PNKP-223ENST00000629179 TMEM17Q86X19 198 aa11.01□□□□□ -0.65
PNKP-223ENST00000629179 SNX29P2Q8IUI4 249 aa11.01□□□□□ -0.65
PNKP-223ENST00000629179 LYSMD2Q8IV50 215 aa11.01□□□□□ -0.65
PNKP-223ENST00000629179 VKORC1L1Q8N0U8 176 aa11.01□□□□□ -0.65
PNKP-223ENST00000629179 MRAPQ8TCY5 172 aa11.01□□□□□ -0.65
PNKP-223ENST00000629179 GPX8Q8TED1 209 aa11.01□□□□□ -0.65
PNKP-223ENST00000629179 MSGN1A6NI15 193 aa11□□□□□ -0.65
PNKP-223ENST00000629179 FAM25AB3EWG3 89 aa11□□□□□ -0.65
PNKP-223ENST00000629179 FAM25CB3EWG5 89 aa11□□□□□ -0.65
PNKP-223ENST00000629179 FAM25GB3EWG6 89 aa11□□□□□ -0.65
PNKP-223ENST00000629179 TRGV3P03979 118 aa11□□□□□ -0.65
PNKP-223ENST00000629179 HLA-DMAP28067 261 aa11□□□□□ -0.65
PNKP-223ENST00000629179 CD40LGP29965 261 aa11□□□□□ -0.65
PNKP-223ENST00000629179 HERV-K104P61576 105 aa11□□□□□ -0.65
PNKP-223ENST00000629179 ZNF616Q08AN1 781 aa11□□□□□ -0.65
PNKP-223ENST00000629179 DYRK1AQ13627 763 aa11□□□□□ -0.65
PNKP-223ENST00000629179 MSMO1Q15800 293 aa11□□□□□ -0.65
PNKP-223ENST00000629179 DHRS11Q6UWP2 260 aa11□□□□□ -0.65
PNKP-223ENST00000629179 ZNF818PQ6ZRF7 136 aa11□□□□□ -0.65
PNKP-223ENST00000629179 ZBTB34Q8NCN2 500 aa11□□□□□ -0.65
PNKP-223ENST00000629179 OR5H2Q8NGV7 314 aa11□□□□□ -0.65
PNKP-223ENST00000629179 OR4S2Q8NH73 311 aa11□□□□□ -0.65
PNKP-223ENST00000629179 DPF1Q92782 380 aa11□□□□□ -0.65
PNKP-223ENST00000629179 PHB2Q99623 299 aa11□□□□□ -0.65
PNKP-223ENST00000629179 ZNF2Q9BSG1 426 aaPredicted RBP11□□□□□ -0.65
PNKP-223ENST00000629179 GPR61Q9BZJ8 451 aa11□□□□□ -0.65
PNKP-223ENST00000629179 ZNF430Q9H8G1 570 aaPredicted RBP11□□□□□ -0.65
PNKP-223ENST00000629179 LGALS1P09382 135 aaKnown RBP10.99□□□□□ -0.65
PNKP-223ENST00000629179 OR8U8P0C7N1 319 aa10.99□□□□□ -0.65
PNKP-223ENST00000629179 TAS2R46P59540 309 aa10.99□□□□□ -0.65
PNKP-223ENST00000629179 EGFEM1PQ0D2K5 195 aa10.99□□□□□ -0.65
PNKP-223ENST00000629179 SPCS2Q15005 226 aa10.99□□□□□ -0.65
PNKP-223ENST00000629179 CLVS1Q8IUQ0 354 aaPredicted RBP10.99□□□□□ -0.65
PNKP-223ENST00000629179 POC5Q8NA72 575 aa10.99□□□□□ -0.65
PNKP-223ENST00000629179 SRSF12Q8WXF0 261 aaKnown RBP10.99□□□□□ -0.65
PNKP-223ENST00000629179 AP3S1Q92572 193 aa10.99□□□□□ -0.65
PNKP-223ENST00000629179 RHOVQ96L33 236 aa10.99□□□□□ -0.65
PNKP-223ENST00000629179 TMEM68Q96MH6 324 aa10.99□□□□□ -0.65
PNKP-223ENST00000629179 SLA2Q9H6Q3 261 aa10.99□□□□□ -0.65
PNKP-223ENST00000629179 DNAH3Q8TD57 4116 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 IGHV4OR15-8A0A075B7B6 117 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 A0A087WW49 117 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 WI2-2373I1.2A0A1W2PRP0 233 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 K7EIL1 84 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 SULT1C2O00338 296 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 RAMP3O60896 148 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 GNRHRP30968 328 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 HRH1P35367 487 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 KIR2DS2P43631 304 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 SLURP1P55000 103 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 DEFA5Q01523 94 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 RNASE12Q5GAN4 147 aaKnown RBP10.98□□□□□ -0.65
PNKP-223ENST00000629179 C10orf55Q5SWW7 151 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 SSX9Q7RTT3 188 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 MMD2Q8IY49 270 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 SPAG16Q8N0X2 631 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 PUSL1Q8N0Z8 303 aaKnown RBP10.98□□□□□ -0.65
PNKP-223ENST00000629179 OR51H1Q8NH63 302 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 DCUN1D4Q92564 292 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 MOB3AQ96BX8 217 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 SCPEP1Q9HB40 452 aa10.98□□□□□ -0.65
PNKP-223ENST00000629179 SEC14L6B5MCN3 397 aa10.97□□□□□ -0.65
PNKP-223ENST00000629179 LINC01619G3V211 115 aa10.97□□□□□ -0.65
PNKP-223ENST00000629179 H3BUA1 57 aa10.97□□□□□ -0.65
PNKP-223ENST00000629179 ACTL6BO94805 426 aa10.97□□□□□ -0.65
PNKP-223ENST00000629179 KBTBD11O94819 623 aa10.97□□□□□ -0.65
PNKP-223ENST00000629179 OR2A4O95047 310 aa10.97□□□□□ -0.65
PNKP-223ENST00000629179 HRASP01112 189 aa10.97□□□□□ -0.65
PNKP-223ENST00000629179 CATR1Q13166 79 aa10.97□□□□□ -0.65
PNKP-223ENST00000629179 C9orf66Q5T8R8 295 aa10.97□□□□□ -0.65
PNKP-223ENST00000629179 TMEM167AQ8TBQ9 72 aa10.97□□□□□ -0.65
PNKP-223ENST00000629179 DLX4Q92988 240 aaPredicted RBP10.97□□□□□ -0.65
PNKP-223ENST00000629179 OR2A7Q96R45 310 aa10.97□□□□□ -0.65
PNKP-223ENST00000629179 COA4Q9NYJ1 87 aa10.97□□□□□ -0.65
PNKP-223ENST00000629179 EXTL2Q9UBQ6 330 aa10.97□□□□□ -0.65
PNKP-223ENST00000629179 ADAM30Q9UKF2 790 aa10.97□□□□□ -0.65
PNKP-223ENST00000629179 C13orf42A0A1B0GVH6 325 aa10.96□□□□□ -0.65
PNKP-223ENST00000629179 MPPED1O15442 326 aa10.96□□□□□ -0.65
PNKP-223ENST00000629179 CREBL2O60519 120 aaPredicted RBP10.96□□□□□ -0.65
PNKP-223ENST00000629179 HSPB1P04792 205 aaKnown RBP10.96□□□□□ -0.65
PNKP-223ENST00000629179 OR9G9P0C7N8 305 aa10.96□□□□□ -0.65
PNKP-223ENST00000629179 TSPAN5P62079 268 aa10.96□□□□□ -0.65
PNKP-223ENST00000629179 AADACL3Q5VUY0 350 aa10.96□□□□□ -0.65
PNKP-223ENST00000629179 ADAD2Q8NCV1 583 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms