RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 RPL28P46779 137 aaKnown RBP0.39□□□□□ -2.35
SCARNA4-201ENST00000629045 EVX1P49640 407 aa0.39□□□□□ -2.35
SCARNA4-201ENST00000629045 ETV1P50549 477 aa0.39□□□□□ -2.35
SCARNA4-201ENST00000629045 HIST1H4AP62805 103 aaKnown RBP0.39□□□□□ -2.35
SCARNA4-201ENST00000629045 FKBP1AP62942 108 aaKnown RBP0.39□□□□□ -2.35
SCARNA4-201ENST00000629045 SLAMF1Q13291 335 aa0.39□□□□□ -2.35
SCARNA4-201ENST00000629045 ELOBQ15370 118 aa0.39□□□□□ -2.35
SCARNA4-201ENST00000629045 HLA-DRB5Q30154 266 aa0.39□□□□□ -2.35
SCARNA4-201ENST00000629045 DEFB115Q30KQ5 88 aa0.39□□□□□ -2.35
SCARNA4-201ENST00000629045 ARHGAP11BQ3KRB8 267 aa0.39□□□□□ -2.35
SCARNA4-201ENST00000629045 FAM173BQ6P4H8 233 aa0.39□□□□□ -2.35
SCARNA4-201ENST00000629045 GPHB5Q86YW7 130 aa0.39□□□□□ -2.35
SCARNA4-201ENST00000629045 Q8N2B8 174 aa0.39□□□□□ -2.35
SCARNA4-201ENST00000629045 TMEM86AQ8N2M4 240 aa0.39□□□□□ -2.35
SCARNA4-201ENST00000629045 RIBC1Q8N443 379 aaPredicted RBP0.39□□□□□ -2.35
SCARNA4-201ENST00000629045 SPERTQ8NA61 448 aa0.39□□□□□ -2.35
SCARNA4-201ENST00000629045 LFNGQ8NES3 379 aa0.39□□□□□ -2.35
SCARNA4-201ENST00000629045 RAB2BQ8WUD1 216 aa0.39□□□□□ -2.35
SCARNA4-201ENST00000629045 ZNHIT6Q9NWK9 470 aaKnown RBP0.39□□□□□ -2.35
SCARNA4-201ENST00000629045 TMED7-TICAM2A0A0A6YYA0 188 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 IGKV1-9A0A0C4DH69 117 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 TEX50A0A1B0GTY4 177 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 C5orf49A4QMS7 147 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 MKRN2OSH3BPM6 223 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 NEMFO60524 1076 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 TFPTP0C1Z6 253 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 RD3LP0DJH9 198 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 CXCL2P19875 107 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 SLCO1A2P46721 670 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 RAB14P61106 215 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 JOSD1Q15040 202 aaPredicted RBP0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 EBPQ15125 230 aaKnown RBP0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 LRRC26Q2I0M4 334 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 C9orf64Q5T6V5 341 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 RASSF6Q6ZTQ3 369 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 DCXRQ7Z4W1 244 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 CRLF3Q8IUI8 442 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 BOD1L2Q8IYS8 172 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 RPP25LQ8N5L8 163 aaKnown RBP0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 CHST6Q9GZX3 395 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 NSRP1Q9H0G5 558 aaKnown RBP0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 NAT8Q9UHE5 227 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 CFAP45Q9UL16 551 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 ZFHX2Q9C0A1 2572 aaPredicted RBP0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 NUP160Q12769 1436 aa0.38□□□□□ -2.35
SCARNA4-201ENST00000629045 NUP153P49790 1475 aaKnown RBP0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 ABCC12Q96J65 1359 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 TMEM269A0A1B0GVZ9 245 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 A0A1B0GW54 56 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 MEIS3P1A6NDR6 274 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 OR51F1A6NGY5 319 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 SMLR1H3BR10 107 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 K7ERQ8 282 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 TOX3O15405 576 aaPredicted RBP0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 HCRTO43612 131 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 SCN2BO60939 215 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 NPPAP01160 153 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 PPBPP02775 128 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 TRGC1P0CF51 173 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 REG1BP48304 166 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 RPS24P62847 133 aaKnown RBP0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 RPL30P62888 115 aaKnown RBP0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 HLA-DRB3P79483 266 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 ANGPT1Q15389 498 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 PLPPR5Q32ZL2 321 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 ACSM3Q53FZ2 586 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 SPATA24Q86W54 205 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 C9orf163Q8N9P6 203 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 ACOT12Q8WYK0 555 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 TESCQ96BS2 214 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 TIPINQ9BVW5 301 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 OR52A5Q9H2C5 316 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 CD300AQ9UGN4 299 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 TP53TG1Q9Y2A0 90 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 C22orf24Q9Y442 160 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 SNURFQ9Y675 71 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 HEATR5BQ9P2D3 2071 aa0.37□□□□□ -2.35
SCARNA4-201ENST00000629045 A0A1W2PP64 1363 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 LRPPRCP42704 1394 aaKnown RBP0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 IBA57-AS1B1ANH7 110 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 FTCDNL1E5RQL4 147 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 YKT6O15498 198 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 ATP8B1O43520 1251 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 ORM1P02763 201 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 PET100P0DJ07 73 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 MSNP26038 577 aaKnown RBP0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 CLDN12P56749 244 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 PMS2P3Q13401 168 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 SAPCD1Q5SSQ6 148 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 MED12LQ86YW9 2145 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 DYNAPQ8N1N2 210 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 UMODL1-AS1Q8N2C9 162 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 FAM19A2Q8N3H0 131 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 OR8B3Q8NGG8 313 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 SLC37A2Q8TED4 501 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 ANKRD36BP1Q96IX9 119 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 CCL13Q99616 98 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 SLC22A4Q9H015 551 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 HES4Q9HCC6 221 aa0.36□□□□□ -2.35
SCARNA4-201ENST00000629045 TREM1Q9NP99 234 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms