RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 MMD2Q8IY49 270 aa12.32□□□□□ -0.44
CHRNA4-211ENST00000628606 MFSD4AQ8N468 514 aa12.32□□□□□ -0.44
CHRNA4-211ENST00000628606 OR5AP2Q8NGF4 316 aa12.32□□□□□ -0.44
CHRNA4-211ENST00000628606 OR13F1Q8NGS4 319 aa12.32□□□□□ -0.44
CHRNA4-211ENST00000628606 VSTM2AQ8TAG5 236 aa12.32□□□□□ -0.44
CHRNA4-211ENST00000628606 SLC25A46Q96AG3 418 aa12.32□□□□□ -0.44
CHRNA4-211ENST00000628606 RHOVQ96L33 236 aa12.32□□□□□ -0.44
CHRNA4-211ENST00000628606 FUNDC2Q9BWH2 189 aa12.32□□□□□ -0.44
CHRNA4-211ENST00000628606 COA4Q9NYJ1 87 aa12.32□□□□□ -0.44
CHRNA4-211ENST00000628606 TAS2R8Q9NYW2 309 aa12.32□□□□□ -0.44
CHRNA4-211ENST00000628606 IGHV4OR15-8A0A075B7B6 117 aa12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 A0A087WW49 117 aa12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 MEIS3P1A6NDR6 274 aa12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 SAP30O75446 220 aa12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 PPYP01298 95 aa12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 SAA1P0DJI8 122 aaPredicted RBP12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 PTHLHP12272 177 aa12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 KIR2DS2P43631 304 aa12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 SLURP1P55000 103 aa12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 RPL30P62888 115 aaKnown RBP12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 CD69Q07108 199 aa12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 ASPHD1Q5U4P2 390 aa12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 ZBTB34Q8NCN2 500 aa12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 SRSF12Q8WXF0 261 aaKnown RBP12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 DLX4Q92988 240 aaPredicted RBP12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 SPIN2AQ99865 258 aa12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 SPIN2BQ9BPZ2 258 aa12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 AIFM2Q9BRQ8 373 aa12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 SLC5A7Q9GZV3 580 aa12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 RANGRFQ9HD47 186 aaPredicted RBP12.31□□□□□ -0.44
CHRNA4-211ENST00000628606 SORL1Q92673 2214 aa12.3□□□□□ -0.44
CHRNA4-211ENST00000628606 LY86O95711 162 aa12.3□□□□□ -0.44
CHRNA4-211ENST00000628606 HRASP01112 189 aa12.3□□□□□ -0.44
CHRNA4-211ENST00000628606 IGLV2-14P01704 120 aa12.3□□□□□ -0.44
CHRNA4-211ENST00000628606 APELAP0DMC3 54 aa12.3□□□□□ -0.44
CHRNA4-211ENST00000628606 ZP3P21754 424 aa12.3□□□□□ -0.44
CHRNA4-211ENST00000628606 FXYD4P59646 89 aa12.3□□□□□ -0.44
CHRNA4-211ENST00000628606 HERV-K104P61576 105 aa12.3□□□□□ -0.44
CHRNA4-211ENST00000628606 SSBP2P81877 361 aaPredicted RBP12.3□□□□□ -0.44
CHRNA4-211ENST00000628606 CATR1Q13166 79 aa12.3□□□□□ -0.44
CHRNA4-211ENST00000628606 MSMO1Q15800 293 aa12.3□□□□□ -0.44
CHRNA4-211ENST00000628606 BORCS5Q969J3 196 aa12.3□□□□□ -0.44
CHRNA4-211ENST00000628606 ELOVL1Q9BW60 279 aa12.3□□□□□ -0.44
CHRNA4-211ENST00000628606 ZNF430Q9H8G1 570 aaPredicted RBP12.3□□□□□ -0.44
CHRNA4-211ENST00000628606 CCL28Q9NRJ3 127 aa12.3□□□□□ -0.44
CHRNA4-211ENST00000628606 COMMD3Q9UBI1 195 aa12.3□□□□□ -0.44
CHRNA4-211ENST00000628606 SCOCQ9UIL1 159 aa12.3□□□□□ -0.44
CHRNA4-211ENST00000628606 TRIM64CA6NLI5 447 aa12.29□□□□□ -0.44
CHRNA4-211ENST00000628606 TNFSF12O43508 249 aa12.29□□□□□ -0.44
CHRNA4-211ENST00000628606 OR2A4O95047 310 aa12.29□□□□□ -0.44
CHRNA4-211ENST00000628606 OR9G9P0C7N8 305 aa12.29□□□□□ -0.44
CHRNA4-211ENST00000628606 PRSS3P35030 304 aa12.29□□□□□ -0.44
CHRNA4-211ENST00000628606 TAS2R46P59540 309 aa12.29□□□□□ -0.44
CHRNA4-211ENST00000628606 TAS2R20P59543 309 aa12.29□□□□□ -0.44
CHRNA4-211ENST00000628606 VBP1P61758 197 aa12.29□□□□□ -0.44
CHRNA4-211ENST00000628606 NCS1P62166 190 aa12.29□□□□□ -0.44
CHRNA4-211ENST00000628606 GIMAP1Q8WWP7 306 aa12.29□□□□□ -0.44
CHRNA4-211ENST00000628606 SNAPC3Q92966 411 aa12.29□□□□□ -0.44
CHRNA4-211ENST00000628606 USMG5Q96IX5 58 aa12.29□□□□□ -0.44
CHRNA4-211ENST00000628606 OR2A7Q96R45 310 aa12.29□□□□□ -0.44
CHRNA4-211ENST00000628606 OR4C12Q96R67 309 aa12.29□□□□□ -0.44
CHRNA4-211ENST00000628606 TINAGL1Q9GZM7 467 aaPredicted RBP12.29□□□□□ -0.44
CHRNA4-211ENST00000628606 EHFQ9NZC4 300 aa12.29□□□□□ -0.44
CHRNA4-211ENST00000628606 ZNF256Q9Y2P7 627 aaPredicted RBP12.29□□□□□ -0.44
CHRNA4-211ENST00000628606 ANKRD34BA5PLL1 514 aa12.28□□□□□ -0.44
CHRNA4-211ENST00000628606 BRI3O95415 125 aa12.28□□□□□ -0.44
CHRNA4-211ENST00000628606 RORCP51449 518 aa12.28□□□□□ -0.44
CHRNA4-211ENST00000628606 SLC25A42Q86VD7 318 aa12.28□□□□□ -0.44
CHRNA4-211ENST00000628606 TMEM17Q86X19 198 aa12.28□□□□□ -0.44
CHRNA4-211ENST00000628606 VKORC1L1Q8N0U8 176 aa12.28□□□□□ -0.44
CHRNA4-211ENST00000628606 OR5H2Q8NGV7 314 aa12.28□□□□□ -0.44
CHRNA4-211ENST00000628606 CMTM3Q96MX0 182 aa12.28□□□□□ -0.44
CHRNA4-211ENST00000628606 PRR25Q96S07 402 aa12.28□□□□□ -0.44
CHRNA4-211ENST00000628606 DPPA5A6NC42 116 aa12.27□□□□□ -0.45
CHRNA4-211ENST00000628606 KBTBD11O94819 623 aa12.27□□□□□ -0.45
CHRNA4-211ENST00000628606 APOA1P02647 267 aa12.27□□□□□ -0.45
CHRNA4-211ENST00000628606 MAS1LP35410 378 aa12.27□□□□□ -0.45
CHRNA4-211ENST00000628606 EIF4EBP1Q13541 118 aaPredicted RBP12.27□□□□□ -0.45
CHRNA4-211ENST00000628606 MRGPRG-AS1Q2M3A8 158 aa12.27□□□□□ -0.45
CHRNA4-211ENST00000628606 MZT2AQ6P582 158 aa12.27□□□□□ -0.45
CHRNA4-211ENST00000628606 SSX9Q7RTT3 188 aa12.27□□□□□ -0.45
CHRNA4-211ENST00000628606 SPAG16Q8N0X2 631 aa12.27□□□□□ -0.45
CHRNA4-211ENST00000628606 OR6Q1Q8NGQ2 317 aa12.27□□□□□ -0.45
CHRNA4-211ENST00000628606 PMP2P02689 132 aa12.26□□□□□ -0.45
CHRNA4-211ENST00000628606 RPL27AP46776 148 aaKnown RBP12.26□□□□□ -0.45
CHRNA4-211ENST00000628606 RFX2P48378 723 aa12.26□□□□□ -0.45
CHRNA4-211ENST00000628606 TATDN3Q17R31 274 aa12.26□□□□□ -0.45
CHRNA4-211ENST00000628606 ACSM6Q6P461 480 aa12.26□□□□□ -0.45
CHRNA4-211ENST00000628606 ADAD2Q8NCV1 583 aaKnown RBP12.26□□□□□ -0.45
CHRNA4-211ENST00000628606 TMEM167AQ8TBQ9 72 aa12.26□□□□□ -0.45
CHRNA4-211ENST00000628606 CD300LFQ8TDQ1 290 aa12.26□□□□□ -0.45
CHRNA4-211ENST00000628606 AP3S1Q92572 193 aa12.26□□□□□ -0.45
CHRNA4-211ENST00000628606 GPHA2Q96T91 129 aa12.26□□□□□ -0.45
CHRNA4-211ENST00000628606 B9D2Q9BPU9 175 aa12.26□□□□□ -0.45
CHRNA4-211ENST00000628606 ZNF2Q9BSG1 426 aaPredicted RBP12.26□□□□□ -0.45
CHRNA4-211ENST00000628606 HRASLSQ9HDD0 168 aa12.26□□□□□ -0.45
CHRNA4-211ENST00000628606 PEF1Q9UBV8 284 aaKnown RBP12.26□□□□□ -0.45
CHRNA4-211ENST00000628606 FAM223BA6NKX1 122 aa12.25□□□□□ -0.45
CHRNA4-211ENST00000628606 FAM25AB3EWG3 89 aa12.25□□□□□ -0.45
CHRNA4-211ENST00000628606 FAM25CB3EWG5 89 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms