RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 RPEL1Q2QD12 228 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 MRPL21Q7Z2W9 205 aaKnown RBP12.76□□□□□ -0.37
PMS1-221ENST00000624204 DRAM1Q8N682 238 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 KIAA1549Q9HCM3 1950 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 IGLV3-32A0A0A0MS00 114 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 A0A1W2PS18 150 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 FAM166BA8MTA8 275 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 RPL31P62899 125 aaKnown RBP12.76□□□□□ -0.37
PMS1-221ENST00000624204 SMIM15Q7Z3B0 74 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 FAM58AQ8N1B3 248 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 ZNF596Q8TC21 504 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 STRADBQ9C0K7 418 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 IGHV3-43A0A0B4J1X8 118 aa12.75□□□□□ -0.37
PMS1-221ENST00000624204 ODAMA1E959 279 aa12.75□□□□□ -0.37
PMS1-221ENST00000624204 C5orf49A4QMS7 147 aa12.75□□□□□ -0.37
PMS1-221ENST00000624204 DUX1O43812 170 aa12.75□□□□□ -0.37
PMS1-221ENST00000624204 IGHV3-43DP0DP04 118 aa12.75□□□□□ -0.37
PMS1-221ENST00000624204 ZNF83P51522 516 aa12.75□□□□□ -0.37
PMS1-221ENST00000624204 PSG7Q13046 419 aa12.75□□□□□ -0.37
PMS1-221ENST00000624204 SRSF7Q16629 238 aaKnown RBP eCLIP12.75□□□□□ -0.37
PMS1-221ENST00000624204 KCNS1Q96KK3 526 aa12.75□□□□□ -0.37
PMS1-221ENST00000624204 ARFGEF3Q5TH69 2177 aa12.75□□□□□ -0.37
PMS1-221ENST00000624204 TRAV24A0A0B4J272 114 aa12.75□□□□□ -0.37
PMS1-221ENST00000624204 LRP5LA4QPB2 252 aa12.75□□□□□ -0.37
PMS1-221ENST00000624204 PRB4P10163 310 aaPredicted RBP12.75□□□□□ -0.37
PMS1-221ENST00000624204 MRPS21P82921 87 aaKnown RBP12.75□□□□□ -0.37
PMS1-221ENST00000624204 STUMQ69YW2 141 aa12.75□□□□□ -0.37
PMS1-221ENST00000624204 RFESDQ8TAC1 157 aa12.75□□□□□ -0.37
PMS1-221ENST00000624204 CLCF1Q9UBD9 225 aa12.75□□□□□ -0.37
PMS1-221ENST00000624204 CD207Q9UJ71 328 aa12.75□□□□□ -0.37
PMS1-221ENST00000624204 K7EN84 100 aa12.75□□□□□ -0.37
PMS1-221ENST00000624204 CEBPDP49716 269 aaPredicted RBP12.75□□□□□ -0.37
PMS1-221ENST00000624204 LGALS4P56470 323 aa12.75□□□□□ -0.37
PMS1-221ENST00000624204 MCRIP2Q9BUT9 160 aaKnown RBP12.75□□□□□ -0.37
PMS1-221ENST00000624204 ZFHX4Q86UP3 3567 aa12.75□□□□□ -0.37
PMS1-221ENST00000624204 DMDP11532 3685 aa12.74□□□□□ -0.37
PMS1-221ENST00000624204 C5orf67F2Z3F1 127 aa12.74□□□□□ -0.37
PMS1-221ENST00000624204 ZNF324O75467 553 aaPredicted RBP12.74□□□□□ -0.37
PMS1-221ENST00000624204 CLDN14O95500 239 aa12.74□□□□□ -0.37
PMS1-221ENST00000624204 TOMM40O96008 361 aa12.74□□□□□ -0.37
PMS1-221ENST00000624204 CA1P00915 261 aaPredicted RBP12.74□□□□□ -0.37
PMS1-221ENST00000624204 PDLIM3Q53GG5 364 aaPredicted RBP12.74□□□□□ -0.37
PMS1-221ENST00000624204 RIPPLY2Q5TAB7 128 aa12.74□□□□□ -0.37
PMS1-221ENST00000624204 TPRX1Q8N7U7 411 aa12.74□□□□□ -0.37
PMS1-221ENST00000624204 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.74□□□□□ -0.37
PMS1-221ENST00000624204 HSPB7Q9UBY9 170 aa12.74□□□□□ -0.37
PMS1-221ENST00000624204 C19orf25Q9UFG5 118 aaPredicted RBP12.74□□□□□ -0.37
PMS1-221ENST00000624204 FAM90A26D6RGX4 464 aa12.74□□□□□ -0.37
PMS1-221ENST00000624204 CXCL13O43927 109 aa12.74□□□□□ -0.37
PMS1-221ENST00000624204 CCR5P51681 352 aa12.74□□□□□ -0.37
PMS1-221ENST00000624204 CXorf67Q86X51 503 aaPredicted RBP12.74□□□□□ -0.37
PMS1-221ENST00000624204 CHRNA10Q9GZZ6 450 aa12.74□□□□□ -0.37
PMS1-221ENST00000624204 DLL3Q9NYJ7 618 aa12.74□□□□□ -0.37
PMS1-221ENST00000624204 IGHV2-70DA0A0C4DH43 119 aa12.74□□□□□ -0.37
PMS1-221ENST00000624204 LRRC30A6NM36 301 aa12.74□□□□□ -0.37
PMS1-221ENST00000624204 FKBP2P26885 142 aaKnown RBP12.74□□□□□ -0.37
PMS1-221ENST00000624204 FADS6Q8N9I5 356 aa12.74□□□□□ -0.37
PMS1-221ENST00000624204 CHCHD2Q9Y6H1 151 aaPredicted RBP12.74□□□□□ -0.37
PMS1-221ENST00000624204 CACNA1GO43497 2377 aa12.73□□□□□ -0.37
PMS1-221ENST00000624204 S1PR2O95136 353 aa12.73□□□□□ -0.37
PMS1-221ENST00000624204 PRRX1P54821 245 aa12.73□□□□□ -0.37
PMS1-221ENST00000624204 DOLPP1Q86YN1 238 aa12.73□□□□□ -0.37
PMS1-221ENST00000624204 RNF138Q8WVD3 245 aa12.73□□□□□ -0.37
PMS1-221ENST00000624204 GMPPAQ96IJ6 420 aaPredicted RBP12.73□□□□□ -0.37
PMS1-221ENST00000624204 PMS2P5A8MQ11 134 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 SNAI2O43623 268 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 CA2P00918 260 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 CCL3P10147 92 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 CD1BP29016 333 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 PCBD1P61457 104 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 MIC13Q5XKP0 118 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 ZNF439Q8NDP4 499 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 MRGPRDQ8TDS7 321 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 FAM122AQ96E09 287 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 COL5A1P20908 1838 aaPredicted RBP12.72□□□□□ -0.37
PMS1-221ENST00000624204 EXPH5Q8NEV8 1989 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 RAB29O14966 203 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 NGFP01138 241 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 CLEC7AQ9BXN2 247 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 GSX1Q9H4S2 264 aaPredicted RBP12.72□□□□□ -0.37
PMS1-221ENST00000624204 MMP17Q9ULZ9 603 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 YTHDF2Q9Y5A9 579 aaKnown RBP12.72□□□□□ -0.37
PMS1-221ENST00000624204 RRHO14718 337 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 GLB1P16278 677 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 CEACAM21Q3KPI0 293 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 H2BFWTQ7Z2G1 175 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 CPT1CQ8TCG5 803 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 OR2D2Q9H210 308 aa12.72□□□□□ -0.37
PMS1-221ENST00000624204 GVINP1Q7Z2Y8 2422 aa12.71□□□□□ -0.37
PMS1-221ENST00000624204 A0A1W2PRS3 328 aa12.71□□□□□ -0.37
PMS1-221ENST00000624204 RHBDL1O75783 438 aa12.71□□□□□ -0.37
PMS1-221ENST00000624204 PSG1P11464 419 aa12.71□□□□□ -0.37
PMS1-221ENST00000624204 RIPPLY3P57055 190 aa12.71□□□□□ -0.37
PMS1-221ENST00000624204 RPL19P84098 196 aaKnown RBP12.71□□□□□ -0.37
PMS1-221ENST00000624204 VKORC1L1Q8N0U8 176 aa12.71□□□□□ -0.37
PMS1-221ENST00000624204 Q8NFD4 153 aa12.71□□□□□ -0.37
PMS1-221ENST00000624204 OR2D3Q8NGH3 330 aa12.71□□□□□ -0.37
PMS1-221ENST00000624204 ABHD3Q8WU67 409 aa12.71□□□□□ -0.37
PMS1-221ENST00000624204 RNASE7Q9H1E1 156 aaKnown RBP12.71□□□□□ -0.37
PMS1-221ENST00000624204 POLEQ07864 2286 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms