RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 IDI2-AS1Q9NZ38 188 aa13.7□□□□□ -0.22
GABRB3-215ENST00000622697 HIGD1AQ9Y241 93 aa13.7□□□□□ -0.22
GABRB3-215ENST00000622697 LOC389332A0A1B0GUA5 103 aa13.7□□□□□ -0.22
GABRB3-215ENST00000622697 C17orf98A8MV24 154 aa13.7□□□□□ -0.22
GABRB3-215ENST00000622697 HSPE1P61604 102 aaKnown RBP13.7□□□□□ -0.22
GABRB3-215ENST00000622697 TMEM45BQ96B21 275 aa13.7□□□□□ -0.22
GABRB3-215ENST00000622697 DEPPQ9NTK1 212 aa13.7□□□□□ -0.22
GABRB3-215ENST00000622697 OR8A1Q8NGG7 326 aa13.7□□□□□ -0.22
GABRB3-215ENST00000622697 RNF24Q9Y225 148 aa13.7□□□□□ -0.22
GABRB3-215ENST00000622697 F2RL2O00254 374 aa13.7□□□□□ -0.22
GABRB3-215ENST00000622697 PTGDSP41222 190 aa13.7□□□□□ -0.22
GABRB3-215ENST00000622697 TFF3Q07654 80 aa13.7□□□□□ -0.22
GABRB3-215ENST00000622697 C5orf63A6NC05 138 aa13.7□□□□□ -0.22
GABRB3-215ENST00000622697 LINC00271P0C7V0 271 aa13.7□□□□□ -0.22
GABRB3-215ENST00000622697 RSPO3Q9BXY4 272 aaPredicted RBP13.7□□□□□ -0.22
GABRB3-215ENST00000622697 METTL1Q9UBP6 276 aaKnown RBP13.69□□□□□ -0.22
GABRB3-215ENST00000622697 PGPA6NDG6 321 aa13.69□□□□□ -0.22
GABRB3-215ENST00000622697 CXorf65A6NEN9 183 aa13.69□□□□□ -0.22
GABRB3-215ENST00000622697 CLPSP04118 112 aa13.69□□□□□ -0.22
GABRB3-215ENST00000622697 ISLRO14498 428 aa13.69□□□□□ -0.22
GABRB3-215ENST00000622697 UCP1P25874 307 aa13.69□□□□□ -0.22
GABRB3-215ENST00000622697 NUBP1P53384 320 aa13.69□□□□□ -0.22
GABRB3-215ENST00000622697 TMEM191AQ9H0A3 160 aa13.69□□□□□ -0.22
GABRB3-215ENST00000622697 NCOR1O75376 2440 aa13.69□□□□□ -0.22
GABRB3-215ENST00000622697 M0QZ24 198 aa13.69□□□□□ -0.22
GABRB3-215ENST00000622697 Q6ZT83 130 aa13.69□□□□□ -0.22
GABRB3-215ENST00000622697 STXBP6Q8NFX7 210 aa13.69□□□□□ -0.22
GABRB3-215ENST00000622697 MAP1LC3CQ9BXW4 147 aa13.69□□□□□ -0.22
GABRB3-215ENST00000622697 MRPL18Q9H0U6 180 aaKnown RBP13.69□□□□□ -0.22
GABRB3-215ENST00000622697 RRHO14718 337 aa13.68□□□□□ -0.22
GABRB3-215ENST00000622697 CECR9P0C854 216 aa13.68□□□□□ -0.22
GABRB3-215ENST00000622697 RNF224P0DH78 156 aa13.68□□□□□ -0.22
GABRB3-215ENST00000622697 BRS3P32247 399 aa13.68□□□□□ -0.22
GABRB3-215ENST00000622697 RIGQ13278 110 aa13.68□□□□□ -0.22
GABRB3-215ENST00000622697 COX19Q49B96 90 aa13.68□□□□□ -0.22
GABRB3-215ENST00000622697 OR13A1Q8NGR1 328 aa13.68□□□□□ -0.22
GABRB3-215ENST00000622697 PINLYPA6NC86 204 aa13.68□□□□□ -0.22
GABRB3-215ENST00000622697 CDX1P47902 265 aaPredicted RBP13.68□□□□□ -0.22
GABRB3-215ENST00000622697 PSG7Q13046 419 aa13.68□□□□□ -0.22
GABRB3-215ENST00000622697 JPT1Q9UK76 154 aa13.68□□□□□ -0.22
GABRB3-215ENST00000622697 TCF20Q9UGU0 1960 aaKnown RBP13.68□□□□□ -0.22
GABRB3-215ENST00000622697 PEAR1Q5VY43 1037 aaPredicted RBP13.68□□□□□ -0.22
GABRB3-215ENST00000622697 ZNF506Q5JVG8 444 aa13.68□□□□□ -0.22
GABRB3-215ENST00000622697 WBP1Q96G27 269 aa13.68□□□□□ -0.22
GABRB3-215ENST00000622697 ACP7Q6ZNF0 438 aa13.67□□□□□ -0.22
GABRB3-215ENST00000622697 GBGT1Q8N5D6 347 aa13.67□□□□□ -0.22
GABRB3-215ENST00000622697 PLPPR1Q8TBJ4 325 aa13.67□□□□□ -0.22
GABRB3-215ENST00000622697 ABLIM2Q6H8Q1 611 aa13.67□□□□□ -0.22
GABRB3-215ENST00000622697 KBTBD11O94819 623 aa13.67□□□□□ -0.22
GABRB3-215ENST00000622697 SSX8Q7RTT4 187 aa13.67□□□□□ -0.22
GABRB3-215ENST00000622697 C1orf174Q8IYL3 243 aa13.67□□□□□ -0.22
GABRB3-215ENST00000622697 STPG3Q8N7X2 389 aa13.67□□□□□ -0.22
GABRB3-215ENST00000622697 FGF11Q92914 225 aa13.67□□□□□ -0.22
GABRB3-215ENST00000622697 DLL1O00548 723 aa13.67□□□□□ -0.22
GABRB3-215ENST00000622697 SLC35E4Q6ICL7 350 aa13.67□□□□□ -0.22
GABRB3-215ENST00000622697 MUC15Q8N387 334 aa13.67□□□□□ -0.22
GABRB3-215ENST00000622697 GGACTQ9BVM4 153 aa13.67□□□□□ -0.22
GABRB3-215ENST00000622697 OR51M1Q9H341 326 aa13.67□□□□□ -0.22
GABRB3-215ENST00000622697 PQLC2LA1A4F0 135 aa13.67□□□□□ -0.22
GABRB3-215ENST00000622697 SRP19P09132 144 aaKnown RBP13.67□□□□□ -0.22
GABRB3-215ENST00000622697 CTSSP25774 331 aa13.67□□□□□ -0.22
GABRB3-215ENST00000622697 FOXG1P55316 489 aaPredicted RBP13.67□□□□□ -0.22
GABRB3-215ENST00000622697 NPCDR1Q9BY65 106 aa13.67□□□□□ -0.22
GABRB3-215ENST00000622697 HTN1P15515 57 aa13.66□□□□□ -0.22
GABRB3-215ENST00000622697 CBY1Q9Y3M2 126 aa13.66□□□□□ -0.22
GABRB3-215ENST00000622697 FAM27E3Q08E93 113 aa13.66□□□□□ -0.22
GABRB3-215ENST00000622697 C5orf24Q7Z6I8 188 aa13.66□□□□□ -0.22
GABRB3-215ENST00000622697 SSBP3Q9BWW4 388 aaPredicted RBP13.66□□□□□ -0.22
GABRB3-215ENST00000622697 GBF1Q92538 1859 aa13.66□□□□□ -0.22
GABRB3-215ENST00000622697 LILRB1Q8NHL6 650 aaPredicted RBP13.66□□□□□ -0.22
GABRB3-215ENST00000622697 LOXL4Q96JB6 756 aa13.66□□□□□ -0.22
GABRB3-215ENST00000622697 PLXNA3P51805 1871 aa13.66□□□□□ -0.22
GABRB3-215ENST00000622697 CA2P00918 260 aa13.66□□□□□ -0.22
GABRB3-215ENST00000622697 IGHV1-2P23083 117 aa13.66□□□□□ -0.22
GABRB3-215ENST00000622697 SNRNP40Q96DI7 357 aaKnown RBP13.66□□□□□ -0.22
GABRB3-215ENST00000622697 C18orf12Q96KH6 178 aa13.66□□□□□ -0.22
GABRB3-215ENST00000622697 ZDHHC8Q9ULC8 765 aa13.66□□□□□ -0.22
GABRB3-215ENST00000622697 MPDZO75970 2070 aa13.66□□□□□ -0.22
GABRB3-215ENST00000622697 IGKV1-12A0A0C4DH73 117 aa13.66□□□□□ -0.22
GABRB3-215ENST00000622697 IGKV1D-12P01611 117 aa13.66□□□□□ -0.22
GABRB3-215ENST00000622697 Q1RN00 199 aa13.66□□□□□ -0.22
GABRB3-215ENST00000622697 NABP2Q9BQ15 211 aa13.66□□□□□ -0.22
GABRB3-215ENST00000622697 CCL1P22362 96 aa13.65□□□□□ -0.22
GABRB3-215ENST00000622697 LHX2P50458 406 aa13.65□□□□□ -0.22
GABRB3-215ENST00000622697 ZMAT5Q9UDW3 170 aaKnown RBP13.65□□□□□ -0.22
GABRB3-215ENST00000622697 CD40P25942 277 aa13.65□□□□□ -0.22
GABRB3-215ENST00000622697 CD81P60033 236 aa13.65□□□□□ -0.22
GABRB3-215ENST00000622697 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.65□□□□□ -0.22
GABRB3-215ENST00000622697 DOLPP1Q86YN1 238 aa13.65□□□□□ -0.22
GABRB3-215ENST00000622697 FAM89BQ8N5H3 189 aa13.65□□□□□ -0.22
GABRB3-215ENST00000622697 PLSCR2Q9NRY7 297 aa13.65□□□□□ -0.22
GABRB3-215ENST00000622697 CGB1A6NKQ9 187 aa13.65□□□□□ -0.22
GABRB3-215ENST00000622697 KLF7O75840 302 aaPredicted RBP13.65□□□□□ -0.22
GABRB3-215ENST00000622697 LRRC75BQ2VPJ9 315 aa13.65□□□□□ -0.22
GABRB3-215ENST00000622697 TMEM116Q8NCL8 245 aa13.65□□□□□ -0.22
GABRB3-215ENST00000622697 NPIPB3Q92617 1050 aa13.65□□□□□ -0.22
GABRB3-215ENST00000622697 PGLYRP4Q96LB8 373 aa13.65□□□□□ -0.22
GABRB3-215ENST00000622697 WFDC1Q9HC57 220 aa13.65□□□□□ -0.22
GABRB3-215ENST00000622697 DNAJC4Q9NNZ3 241 aa13.65□□□□□ -0.22
GABRB3-215ENST00000622697 HOXB1P14653 301 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms