RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 BCL2L2Q92843 193 aaPredicted RBP13.16□□□□□ -0.3
NPHP4-211ENST00000622020 COQ2Q96H96 371 aa13.16□□□□□ -0.3
NPHP4-211ENST00000622020 MS4A10Q96PG2 267 aa13.16□□□□□ -0.3
NPHP4-211ENST00000622020 IL17BQ9UHF5 180 aa13.16□□□□□ -0.3
NPHP4-211ENST00000622020 SCO2A0A1W2PP80 73 aa13.15□□□□□ -0.3
NPHP4-211ENST00000622020 FAM90A26D6RGX4 464 aa13.15□□□□□ -0.3
NPHP4-211ENST00000622020 RRHO14718 337 aa13.15□□□□□ -0.3
NPHP4-211ENST00000622020 ACOT6Q3I5F7 207 aaPredicted RBP13.15□□□□□ -0.3
NPHP4-211ENST00000622020 GBGT1Q8N5D6 347 aa13.15□□□□□ -0.3
NPHP4-211ENST00000622020 HEYLQ9NQ87 328 aaPredicted RBP13.15□□□□□ -0.3
NPHP4-211ENST00000622020 WIPI2Q9Y4P8 454 aa13.15□□□□□ -0.3
NPHP4-211ENST00000622020 CEP250Q9BV73 2442 aa13.15□□□□□ -0.3
NPHP4-211ENST00000622020 C15orf62A8K5M9 175 aa13.15□□□□□ -0.3
NPHP4-211ENST00000622020 ADMP35318 185 aa13.15□□□□□ -0.3
NPHP4-211ENST00000622020 UBE2NP61088 152 aaKnown RBP13.15□□□□□ -0.3
NPHP4-211ENST00000622020 CISD2Q8N5K1 135 aaKnown RBP13.15□□□□□ -0.3
NPHP4-211ENST00000622020 MRPS18CQ9Y3D5 142 aaKnown RBP13.15□□□□□ -0.3
NPHP4-211ENST00000622020 ROS1P08922 2347 aa13.15□□□□□ -0.3
NPHP4-211ENST00000622020 TRAV3A0A0B4J244 114 aa13.15□□□□□ -0.3
NPHP4-211ENST00000622020 WISP2O76076 250 aa13.15□□□□□ -0.3
NPHP4-211ENST00000622020 ZNF146Q15072 292 aa13.15□□□□□ -0.3
NPHP4-211ENST00000622020 BATFQ16520 125 aa13.15□□□□□ -0.3
NPHP4-211ENST00000622020 IQCJQ1A5X6 159 aa13.15□□□□□ -0.3
NPHP4-211ENST00000622020 ACSF3Q4G176 576 aaPredicted RBP13.15□□□□□ -0.3
NPHP4-211ENST00000622020 LEAP2Q969E1 77 aa13.15□□□□□ -0.3
NPHP4-211ENST00000622020 GP6Q9HCN6 339 aa13.15□□□□□ -0.3
NPHP4-211ENST00000622020 ARFGEF3Q5TH69 2177 aa13.14□□□□□ -0.31
NPHP4-211ENST00000622020 C9orf172C9J069 976 aa13.14□□□□□ -0.31
NPHP4-211ENST00000622020 C17orf112F2Z3M2 114 aa13.14□□□□□ -0.31
NPHP4-211ENST00000622020 ATP6V1FQ16864 119 aa13.14□□□□□ -0.31
NPHP4-211ENST00000622020 PDLIM3Q53GG5 364 aaPredicted RBP13.14□□□□□ -0.31
NPHP4-211ENST00000622020 COA6Q5JTJ3 125 aaKnown RBP13.14□□□□□ -0.31
NPHP4-211ENST00000622020 DCAF10Q5QP82 559 aa13.14□□□□□ -0.31
NPHP4-211ENST00000622020 CENPVQ7Z7K6 275 aaPredicted RBP13.14□□□□□ -0.31
NPHP4-211ENST00000622020 R3HDM4Q96D70 268 aa13.14□□□□□ -0.31
NPHP4-211ENST00000622020 TBX15Q96SF7 602 aa13.14□□□□□ -0.31
NPHP4-211ENST00000622020 ZDHHC11Q9H8X9 412 aa13.14□□□□□ -0.31
NPHP4-211ENST00000622020 POLR3KQ9Y2Y1 108 aaPredicted RBP13.14□□□□□ -0.31
NPHP4-211ENST00000622020 F6UZH7 168 aa13.14□□□□□ -0.31
NPHP4-211ENST00000622020 RAB4BP61018 213 aa13.14□□□□□ -0.31
NPHP4-211ENST00000622020 SLC35B1P78383 322 aa13.14□□□□□ -0.31
NPHP4-211ENST00000622020 RNFT1Q5M7Z0 435 aa13.14□□□□□ -0.31
NPHP4-211ENST00000622020 ASPHD1Q5U4P2 390 aa13.14□□□□□ -0.31
NPHP4-211ENST00000622020 HINT2Q9BX68 163 aa13.14□□□□□ -0.31
NPHP4-211ENST00000622020 HCFC1P51610 2035 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 MLNRO43193 412 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 CLDN14O95500 239 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 KITLGP21583 273 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 SRP14P37108 136 aaKnown RBP13.13□□□□□ -0.31
NPHP4-211ENST00000622020 RPL39P5Q59GN2 51 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 PRAMEF5Q5TYX0 476 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 TOMM20LQ6UXN7 152 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 CNEP1R1Q8N9A8 125 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 OCC1Q8TAD7 63 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 KLF14Q8TD94 323 aaPredicted RBP13.13□□□□□ -0.31
NPHP4-211ENST00000622020 SFRP2Q96HF1 295 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 MDFIC2A0A1B0GVS7 189 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 F2Z2F3 143 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 FOXF2Q12947 444 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 HLA-DRB5Q30154 266 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 UTF1Q5T230 341 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 SPATA31B1PQ5VZV4 182 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 Q8IYB0 196 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 Q8N7P7 452 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 PARD6GQ9BYG4 376 aaPredicted RBP13.13□□□□□ -0.31
NPHP4-211ENST00000622020 OOEPA6NGQ2 149 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 ACTL6BO94805 426 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 CER1O95813 267 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 P0C879 139 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 PDLIM4P50479 330 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 NANOS1Q8WY41 292 aaKnown RBP13.13□□□□□ -0.31
NPHP4-211ENST00000622020 GNG12Q9UBI6 72 aa13.13□□□□□ -0.31
NPHP4-211ENST00000622020 TNCP24821 2201 aa13.12□□□□□ -0.31
NPHP4-211ENST00000622020 TNRC6BQ9UPQ9 1833 aaKnown RBP13.12□□□□□ -0.31
NPHP4-211ENST00000622020 RPL15P61313 204 aaKnown RBP13.12□□□□□ -0.31
NPHP4-211ENST00000622020 BEND2Q8NDZ0 799 aa13.12□□□□□ -0.31
NPHP4-211ENST00000622020 FAM122AQ96E09 287 aa13.12□□□□□ -0.31
NPHP4-211ENST00000622020 FAM103A1Q9BTL3 118 aaKnown RBP13.12□□□□□ -0.31
NPHP4-211ENST00000622020 MS4A5Q9H3V2 200 aa13.12□□□□□ -0.31
NPHP4-211ENST00000622020 NAGKQ9UJ70 344 aa13.12□□□□□ -0.31
NPHP4-211ENST00000622020 PAM16Q9Y3D7 125 aa13.12□□□□□ -0.31
NPHP4-211ENST00000622020 FOXH1O75593 365 aa13.12□□□□□ -0.31
NPHP4-211ENST00000622020 SFTPCP11686 197 aa13.12□□□□□ -0.31
NPHP4-211ENST00000622020 ZNF90Q03938 601 aa13.12□□□□□ -0.31
NPHP4-211ENST00000622020 OR5I1Q13606 314 aa13.12□□□□□ -0.31
NPHP4-211ENST00000622020 CACNA1GO43497 2377 aa13.11□□□□□ -0.31
NPHP4-211ENST00000622020 A0A1W2PNU3 283 aaPredicted RBP13.11□□□□□ -0.31
NPHP4-211ENST00000622020 PROP1O75360 226 aa13.11□□□□□ -0.31
NPHP4-211ENST00000622020 MYOD1P15172 320 aa13.11□□□□□ -0.31
NPHP4-211ENST00000622020 MRPL49Q13405 166 aaKnown RBP13.11□□□□□ -0.31
NPHP4-211ENST00000622020 TREML4Q6UXN2 200 aa13.11□□□□□ -0.31
NPHP4-211ENST00000622020 OR4A16Q8NH70 328 aa13.11□□□□□ -0.31
NPHP4-211ENST00000622020 SEPSECSQ9HD40 501 aaKnown RBP13.11□□□□□ -0.31
NPHP4-211ENST00000622020 SPRR3Q9UBC9 169 aa13.11□□□□□ -0.31
NPHP4-211ENST00000622020 PXMP4Q9Y6I8 212 aa13.11□□□□□ -0.31
NPHP4-211ENST00000622020 M0R1X1 148 aa13.11□□□□□ -0.31
NPHP4-211ENST00000622020 RAB29O14966 203 aa13.11□□□□□ -0.31
NPHP4-211ENST00000622020 VENTXO95231 258 aa13.11□□□□□ -0.31
NPHP4-211ENST00000622020 NPSP0C0P6 89 aa13.11□□□□□ -0.31
NPHP4-211ENST00000622020 CIB3Q96Q77 187 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms