RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 RITA1Q96K30 269 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 AIFM2Q9BRQ8 373 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 MS4A7Q9GZW8 240 aaPredicted RBP6.45□□□□□ -1.38
CPNE3-209ENST00000620393 TMEM160Q9NX00 188 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 TMED3Q9Y3Q3 217 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 ITPR3Q14573 2671 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 MYO9AB2RTY4 2548 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 ABCA2Q9BZC7 2435 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 SHOXO15266 292 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 ADAP1O75689 374 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 VENTXO95231 258 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 IGKV1-5P01602 117 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 FBP1P09467 338 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 FAM106CPP0CH98 169 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 TRAPPC2P0DI81 140 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 TRAPPC2BP0DI82 140 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 CXCL3P19876 107 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 AANATQ16613 207 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 POU2AF1Q16633 256 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 GGNBP1Q5YKI7 109 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 BCL6BQ8N143 479 aaPredicted RBP6.44□□□□□ -1.38
CPNE3-209ENST00000620393 SLC35G3Q8N808 338 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 OR11H7Q8NGC8 314 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 OR2T10Q8NGZ9 312 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 PIFOQ8TCI5 191 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 GPR146Q96CH1 333 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 R3HDM4Q96D70 268 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 RBMXL1Q96E39 390 aaKnown RBP6.44□□□□□ -1.38
CPNE3-209ENST00000620393 RRNAD1Q96FB5 475 aaKnown RBP6.44□□□□□ -1.38
CPNE3-209ENST00000620393 EAF1Q96JC9 268 aaPredicted RBP6.44□□□□□ -1.38
CPNE3-209ENST00000620393 SMR3AQ99954 134 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 PRDM13Q9H4Q3 707 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 COMMD9Q9P000 198 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 MGAT4CQ9UBM8 478 aa6.44□□□□□ -1.38
CPNE3-209ENST00000620393 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.44□□□□□ -1.386e-10■□□□□ 10.9
CPNE3-209ENST00000620393 ZNF469Q96JG9 3925 aaPredicted RBP6.44□□□□□ -1.38
CPNE3-209ENST00000620393 C13orf42A0A1B0GVH6 325 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 C5orf51A6NDU8 294 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 GOSR2O14653 212 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 OR2A4O95047 310 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 MOSP00540 346 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 IGKV1D-33P01593 117 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 IGKV1-33P01594 117 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 IGLV2-23P01705 113 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 SNRNP70P08621 437 aaKnown RBP6.43□□□□□ -1.38
CPNE3-209ENST00000620393 IL6RP08887 468 aaPredicted RBP6.43□□□□□ -1.38
CPNE3-209ENST00000620393 P0C879 139 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 SLC25A6P12236 298 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 CD33P20138 364 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 CD24P25063 80 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 G6PCP35575 357 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 SRP14P37108 136 aaKnown RBP6.43□□□□□ -1.38
CPNE3-209ENST00000620393 ERVK-16P61578 105 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 SRSF4Q08170 494 aaKnown RBP6.43□□□□□ -1.38
CPNE3-209ENST00000620393 HNF4GQ14541 408 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 DEFB112Q30KQ8 113 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 NMSQ5H8A3 153 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 CLEC9AQ6UXN8 241 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 GSG1LQ6UXU4 331 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 Q6ZRM9 215 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 H2BFWTQ7Z2G1 175 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 FAM219AQ8IW50 185 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 Q8N6K4 173 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 DMBX1Q8NFW5 382 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 OR5M8Q8NGP6 311 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 OR10C1Q96KK4 312 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 RHOVQ96L33 236 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 OR2A7Q96R45 310 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 TSNAXQ99598 290 aaKnown RBP6.43□□□□□ -1.38
CPNE3-209ENST00000620393 SSX3Q99909 188 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 MMP24Q9Y5R2 645 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 CR1P17927 2039 aa6.43□□□□□ -1.38
CPNE3-209ENST00000620393 A0A0G2JRQ6 117 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 A0A1B0GU03 582 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 MARCH11A6NNE9 402 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 MPTX1A8MV57 137 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 FAM25EA8MYX2 175 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 CCSO14618 274 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 PITX3O75364 302 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 SIX6O95475 246 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 CRYGBP07316 175 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 HNF1AP20823 631 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 AKR1C2P52895 323 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 F2RL1P55085 397 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 H2BFSP57053 126 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 UBE2KP61086 200 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 CYCSP99999 105 aaKnown RBP6.42□□□□□ -1.38
CPNE3-209ENST00000620393 IL15RAQ13261 267 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 HES1Q14469 280 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 PSG5Q15238 335 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 LRRC75BQ2VPJ9 315 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 VMA21Q3ZAQ7 101 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 SAMD5Q5TGI4 173 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 Q6YL49 198 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 SSX9Q7RTT3 188 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 VKORC1L1Q8N0U8 176 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 PUSL1Q8N0Z8 303 aaKnown RBP6.42□□□□□ -1.38
CPNE3-209ENST00000620393 TEX45Q8NA69 505 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 NPBQ8NG41 125 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 RNASE11Q8TAA1 199 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms