RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 HLA-CQ95604 372 aa10.85□□□□□ -0.67
SKP2-209ENST00000620197 DUTP33316 252 aaKnown RBP10.85□□□□□ -0.67
SKP2-209ENST00000620197 MPV17P39210 176 aa10.85□□□□□ -0.67
SKP2-209ENST00000620197 TNFSF10P50591 281 aa10.85□□□□□ -0.67
SKP2-209ENST00000620197 LINC00205P59089 165 aa10.85□□□□□ -0.67
SKP2-209ENST00000620197 AESQ08117 197 aa10.85□□□□□ -0.67
SKP2-209ENST00000620197 DCAF10Q5QP82 559 aa10.85□□□□□ -0.67
SKP2-209ENST00000620197 WDR82Q6UXN9 313 aa10.85□□□□□ -0.67
SKP2-209ENST00000620197 TEX43Q6ZNM6 134 aa10.85□□□□□ -0.67
SKP2-209ENST00000620197 MRPL41Q8IXM3 137 aaKnown RBP10.85□□□□□ -0.67
SKP2-209ENST00000620197 SLC25A40Q8TBP6 338 aa10.85□□□□□ -0.67
SKP2-209ENST00000620197 DDB2Q92466 427 aa10.85□□□□□ -0.67
SKP2-209ENST00000620197 OR51B6Q9H340 312 aa10.85□□□□□ -0.67
SKP2-209ENST00000620197 FKBP11Q9NYL4 201 aa10.85□□□□□ -0.67
SKP2-209ENST00000620197 FOXJ2Q9P0K8 574 aa10.85□□□□□ -0.67
SKP2-209ENST00000620197 K7EN84 100 aa10.84□□□□□ -0.67
SKP2-209ENST00000620197 WNT9BO14905 357 aa10.84□□□□□ -0.67
SKP2-209ENST00000620197 NDUFB4O95168 129 aa10.84□□□□□ -0.67
SKP2-209ENST00000620197 IGHV1-2P23083 117 aa10.84□□□□□ -0.67
SKP2-209ENST00000620197 BTNL3Q6UXE8 466 aa10.84□□□□□ -0.67
SKP2-209ENST00000620197 UBALD2Q8IYN6 164 aa10.84□□□□□ -0.67
SKP2-209ENST00000620197 TMUB1Q9BVT8 246 aa10.84□□□□□ -0.67
SKP2-209ENST00000620197 GGTLC1Q9BX51 225 aa10.84□□□□□ -0.67
SKP2-209ENST00000620197 TRAV38-1A0A0B4J264 116 aa10.84□□□□□ -0.67
SKP2-209ENST00000620197 C21orf140B9A014 251 aa10.84□□□□□ -0.67
SKP2-209ENST00000620197 IGKV3-15P01624 115 aa10.84□□□□□ -0.67
SKP2-209ENST00000620197 SELEP16581 610 aa10.84□□□□□ -0.67
SKP2-209ENST00000620197 CHRNA7P36544 502 aa10.84□□□□□ -0.67
SKP2-209ENST00000620197 COMPP49747 757 aaPredicted RBP10.84□□□□□ -0.67
SKP2-209ENST00000620197 PMP22Q01453 160 aa10.84□□□□□ -0.67
SKP2-209ENST00000620197 H2BFWTQ7Z2G1 175 aa10.84□□□□□ -0.67
SKP2-209ENST00000620197 OR13A1Q8NGR1 328 aa10.84□□□□□ -0.67
SKP2-209ENST00000620197 ZDHHC11Q9H8X9 412 aa10.84□□□□□ -0.67
SKP2-209ENST00000620197 DOCK11Q5JSL3 2073 aa10.84□□□□□ -0.67
SKP2-209ENST00000620197 TRGV8A0A0C4DH27 118 aa10.83□□□□□ -0.67
SKP2-209ENST00000620197 C19orf67A6NJJ6 358 aa10.83□□□□□ -0.67
SKP2-209ENST00000620197 M0R143 59 aa10.83□□□□□ -0.67
SKP2-209ENST00000620197 GFRA3O60609 400 aa10.83□□□□□ -0.67
SKP2-209ENST00000620197 KITLGP21583 273 aa10.83□□□□□ -0.67
SKP2-209ENST00000620197 G0S2P27469 103 aa10.83□□□□□ -0.67
SKP2-209ENST00000620197 HOXA4Q00056 320 aaPredicted RBP10.83□□□□□ -0.67
SKP2-209ENST00000620197 ZNF808Q8N4W9 903 aaPredicted RBP10.83□□□□□ -0.67
SKP2-209ENST00000620197 METRNQ9UJH8 293 aa10.83□□□□□ -0.67
SKP2-209ENST00000620197 RBM7Q9Y580 266 aaKnown RBP10.83□□□□□ -0.67
SKP2-209ENST00000620197 ADMP35318 185 aa10.83□□□□□ -0.68
SKP2-209ENST00000620197 MEOX1P50221 254 aa10.83□□□□□ -0.68
SKP2-209ENST00000620197 TPTE2P1Q5T6R2 138 aa10.83□□□□□ -0.68
SKP2-209ENST00000620197 ABHD17BQ5VST6 288 aa10.83□□□□□ -0.68
SKP2-209ENST00000620197 CYB5R2Q6BCY4 276 aa10.83□□□□□ -0.68
SKP2-209ENST00000620197 FAM180AQ6UWF9 173 aa10.83□□□□□ -0.68
SKP2-209ENST00000620197 KLF14Q8TD94 323 aaPredicted RBP10.83□□□□□ -0.68
SKP2-209ENST00000620197 DCAF16Q9NXF7 216 aa10.83□□□□□ -0.68
SKP2-209ENST00000620197 NAGKQ9UJ70 344 aa10.83□□□□□ -0.68
SKP2-209ENST00000620197 YTHDF2Q9Y5A9 579 aaKnown RBP10.83□□□□□ -0.68
SKP2-209ENST00000620197 TRAPPC1Q9Y5R8 145 aa10.83□□□□□ -0.68
SKP2-209ENST00000620197 C9JCJ5 164 aa10.83□□□□□ -0.68
SKP2-209ENST00000620197 CRYAAP02489 173 aa10.83□□□□□ -0.68
SKP2-209ENST00000620197 ZNF883P0CG24 379 aa10.83□□□□□ -0.68
SKP2-209ENST00000620197 AREGP15514 252 aa10.83□□□□□ -0.68
SKP2-209ENST00000620197 SSTR5P35346 364 aa10.83□□□□□ -0.68
SKP2-209ENST00000620197 RELBQ01201 579 aa10.83□□□□□ -0.68
SKP2-209ENST00000620197 RNFT1Q5M7Z0 435 aa10.83□□□□□ -0.68
SKP2-209ENST00000620197 RBM14Q96PK6 669 aaKnown RBP10.83□□□□□ -0.68
SKP2-209ENST00000620197 C12orf49Q9H741 205 aa10.83□□□□□ -0.68
SKP2-209ENST00000620197 PPP1R14DQ9NXH3 145 aa10.83□□□□□ -0.68
SKP2-209ENST00000620197 ARL2-SNX15V9GYD0 113 aa10.83□□□□□ -0.68
SKP2-209ENST00000620197 TDRG1Q3Y452 100 aa10.82□□□□□ -0.68
SKP2-209ENST00000620197 Q6ZWC4 215 aa10.82□□□□□ -0.68
SKP2-209ENST00000620197 C20orf144Q9BQM9 153 aa10.82□□□□□ -0.68
SKP2-209ENST00000620197 PGPEP1LA6NFU8 196 aa10.82□□□□□ -0.68
SKP2-209ENST00000620197 CXorf1O96002 111 aa10.82□□□□□ -0.68
SKP2-209ENST00000620197 ARL14EPLP0DKL9 152 aa10.82□□□□□ -0.68
SKP2-209ENST00000620197 EGR1P18146 543 aa10.82□□□□□ -0.68
SKP2-209ENST00000620197 LOXL3P58215 753 aa10.82□□□□□ -0.68
SKP2-209ENST00000620197 RELQ04864 619 aaPredicted RBP10.82□□□□□ -0.68
SKP2-209ENST00000620197 TRAT1Q6PIZ9 186 aa10.82□□□□□ -0.68
SKP2-209ENST00000620197 CD177Q8N6Q3 437 aa10.82□□□□□ -0.68
SKP2-209ENST00000620197 ZNF709Q8N972 641 aa10.82□□□□□ -0.68
SKP2-209ENST00000620197 ZCCHC14Q8WYQ9 949 aaKnown RBP10.82□□□□□ -0.68
SKP2-209ENST00000620197 GMPPAQ96IJ6 420 aaPredicted RBP10.82□□□□□ -0.68
SKP2-209ENST00000620197 CLCF1Q9UBD9 225 aa10.82□□□□□ -0.68
SKP2-209ENST00000620197 ADH4P08319 380 aa10.82□□□□□ -0.68
SKP2-209ENST00000620197 OR10J4P0C629 311 aa10.82□□□□□ -0.68
SKP2-209ENST00000620197 Q8N976 141 aa10.82□□□□□ -0.68
SKP2-209ENST00000620197 MRGPRDQ8TDS7 321 aa10.82□□□□□ -0.68
SKP2-209ENST00000620197 CDX2Q99626 313 aaPredicted RBP10.82□□□□□ -0.68
SKP2-209ENST00000620197 MS4A5Q9H3V2 200 aa10.82□□□□□ -0.68
SKP2-209ENST00000620197 HPRT1P00492 218 aa10.81□□□□□ -0.68
SKP2-209ENST00000620197 IL6RP08887 468 aaPredicted RBP10.81□□□□□ -0.68
SKP2-209ENST00000620197 OR10J1P30954 320 aa10.81□□□□□ -0.68
SKP2-209ENST00000620197 LGALS4P56470 323 aa10.81□□□□□ -0.68
SKP2-209ENST00000620197 Q0VG73 95 aa10.81□□□□□ -0.68
SKP2-209ENST00000620197 C1orf229Q6ZS94 237 aaPredicted RBP10.81□□□□□ -0.68
SKP2-209ENST00000620197 SGMS2Q8NHU3 365 aa10.81□□□□□ -0.68
SKP2-209ENST00000620197 OCC1Q8TAD7 63 aa10.81□□□□□ -0.68
SKP2-209ENST00000620197 TMEM204Q9BSN7 226 aa10.81□□□□□ -0.68
SKP2-209ENST00000620197 TMEM208Q9BTX3 173 aa10.81□□□□□ -0.68
SKP2-209ENST00000620197 CXXC4Q9H2H0 198 aa10.81□□□□□ -0.68
SKP2-209ENST00000620197 KLF13Q9Y2Y9 288 aaPredicted RBP10.81□□□□□ -0.68
SKP2-209ENST00000620197 ZFHX4Q86UP3 3567 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms