RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 FZR1Q9UM11 496 aa16.96■□□□□ 0.3
NEK3-208ENST00000618534 TRBV20OR9-2A0A075B6H5 130 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 FCGR3BO75015 233 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 CD46P15529 392 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 ARG2P78540 354 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 PAX5Q02548 391 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 TMEM249Q2WGJ8 235 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 DBX2Q6ZNG2 339 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 BEND2Q8NDZ0 799 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 GMPPAQ96IJ6 420 aaPredicted RBP16.95■□□□□ 0.3
NEK3-208ENST00000618534 F6UZH7 168 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 PROP1O75360 226 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 AGFG2O95081 481 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 ARL14EPLP0DKL9 152 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 SELLP14151 372 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 TMEM164Q5U3C3 297 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 TMPRSS7Q7RTY8 843 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 C1orf210Q8IVY1 113 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 TMEM256Q8N2U0 113 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 WDR31Q8NA23 367 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 TP53TG5Q9Y2B4 290 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 PXMP4Q9Y6I8 212 aa16.95■□□□□ 0.3
NEK3-208ENST00000618534 C15orf65H3BRN8 121 aa16.94■□□□□ 0.3
NEK3-208ENST00000618534 DUTP33316 252 aaKnown RBP16.94■□□□□ 0.3
NEK3-208ENST00000618534 EDDM3AQ14507 147 aa16.94■□□□□ 0.3
NEK3-208ENST00000618534 IQCJQ1A5X6 159 aa16.94■□□□□ 0.3
NEK3-208ENST00000618534 PRAMEF5Q5TYX0 476 aa16.94■□□□□ 0.3
NEK3-208ENST00000618534 TREML4Q6UXN2 200 aa16.94■□□□□ 0.3
NEK3-208ENST00000618534 SGMS2Q8NHU3 365 aa16.94■□□□□ 0.3
NEK3-208ENST00000618534 Q8TCH9 128 aa16.94■□□□□ 0.3
NEK3-208ENST00000618534 SFRP2Q96HF1 295 aa16.94■□□□□ 0.3
NEK3-208ENST00000618534 FAM234AQ9H0X4 552 aa16.94■□□□□ 0.3
NEK3-208ENST00000618534 MSL2Q9HCI7 577 aa16.94■□□□□ 0.3
NEK3-208ENST00000618534 HCFC1P51610 2035 aa16.94■□□□□ 0.3
NEK3-208ENST00000618534 ZNF891A8MT65 544 aaPredicted RBP16.94■□□□□ 0.3
NEK3-208ENST00000618534 RRHO14718 337 aa16.94■□□□□ 0.3
NEK3-208ENST00000618534 ATP1A1-AS1Q5TC04 95 aa16.94■□□□□ 0.3
NEK3-208ENST00000618534 VKORC1L1Q8N0U8 176 aa16.94■□□□□ 0.3
NEK3-208ENST00000618534 PRO3102Q9H379 93 aa16.94■□□□□ 0.3
NEK3-208ENST00000618534 EREGO14944 169 aa16.93■□□□□ 0.3
NEK3-208ENST00000618534 SPINT2O43291 252 aa16.93■□□□□ 0.3
NEK3-208ENST00000618534 GPR12P47775 334 aa16.93■□□□□ 0.3
NEK3-208ENST00000618534 FOXL1Q12952 345 aa16.93■□□□□ 0.3
NEK3-208ENST00000618534 INO80CQ6PI98 192 aaPredicted RBP16.93■□□□□ 0.3
NEK3-208ENST00000618534 TCF23Q7RTU1 214 aa16.93■□□□□ 0.3
NEK3-208ENST00000618534 IMMP2LQ96T52 175 aa16.93■□□□□ 0.3
NEK3-208ENST00000618534 MGST2Q99735 147 aa16.93■□□□□ 0.3
NEK3-208ENST00000618534 ELOVL5Q9NYP7 299 aa16.93■□□□□ 0.3
NEK3-208ENST00000618534 PRR14LQ5THK1 2151 aa16.93■□□□□ 0.3
NEK3-208ENST00000618534 TIMM8AO60220 97 aaPredicted RBP16.92■□□□□ 0.3
NEK3-208ENST00000618534 TNFSF15O95150 251 aa16.92■□□□□ 0.3
NEK3-208ENST00000618534 HNF1AP20823 631 aa16.92■□□□□ 0.3
NEK3-208ENST00000618534 GCH1P30793 250 aa16.92■□□□□ 0.3
NEK3-208ENST00000618534 OPRK1P41145 380 aa16.92■□□□□ 0.3
NEK3-208ENST00000618534 AARDQ4LEZ3 155 aa16.92■□□□□ 0.3
NEK3-208ENST00000618534 MIC13Q5XKP0 118 aa16.92■□□□□ 0.3
NEK3-208ENST00000618534 TEX38Q6PEX7 206 aa16.92■□□□□ 0.3
NEK3-208ENST00000618534 CD177Q8N6Q3 437 aa16.92■□□□□ 0.3
NEK3-208ENST00000618534 MS4A5Q9H3V2 200 aa16.92■□□□□ 0.3
NEK3-208ENST00000618534 MDFIC2A0A1B0GVS7 189 aa16.92■□□□□ 0.3
NEK3-208ENST00000618534 SCO2A0A1W2PP80 73 aa16.92■□□□□ 0.3
NEK3-208ENST00000618534 NUPR1O60356 82 aa16.92■□□□□ 0.3
NEK3-208ENST00000618534 MPDU1O75352 247 aa16.92■□□□□ 0.3
NEK3-208ENST00000618534 SPCS3P61009 180 aa16.92■□□□□ 0.3
NEK3-208ENST00000618534 TRIP6Q15654 476 aaKnown RBP16.92■□□□□ 0.3
NEK3-208ENST00000618534 SMIM21Q3B7S5 101 aa16.92■□□□□ 0.3
NEK3-208ENST00000618534 TGIF2LXQ8IUE1 241 aa16.92■□□□□ 0.3
NEK3-208ENST00000618534 GGTLC1Q9BX51 225 aa16.92■□□□□ 0.3
NEK3-208ENST00000618534 HEYLQ9NQ87 328 aaPredicted RBP16.92■□□□□ 0.3
NEK3-208ENST00000618534 FKBP11Q9NYL4 201 aa16.92■□□□□ 0.3
NEK3-208ENST00000618534 SCGB1D1O95968 90 aa16.91■□□□□ 0.3
NEK3-208ENST00000618534 PDLIM3Q53GG5 364 aaPredicted RBP16.91■□□□□ 0.3
NEK3-208ENST00000618534 OR4A16Q8NH70 328 aa16.91■□□□□ 0.3
NEK3-208ENST00000618534 COL6A3P12111 3177 aa16.91■□□□□ 0.3
NEK3-208ENST00000618534 PRSS46E5RG02 174 aa16.91■□□□□ 0.3
NEK3-208ENST00000618534 STAG3L2P0CL84 134 aa16.91■□□□□ 0.3
NEK3-208ENST00000618534 STAG3L3P0CL85 134 aa16.91■□□□□ 0.3
NEK3-208ENST00000618534 VDAC2P45880 294 aaPredicted RBP16.91■□□□□ 0.3
NEK3-208ENST00000618534 HTD2P86397 168 aa16.91■□□□□ 0.3
NEK3-208ENST00000618534 BTF3L4Q96K17 158 aa16.91■□□□□ 0.3
NEK3-208ENST00000618534 KNTC1P50748 2209 aa16.91■□□□□ 0.3
NEK3-208ENST00000618534 TRAV3A0A0B4J244 114 aa16.9■□□□□ 0.3
NEK3-208ENST00000618534 AQP7O14520 342 aa16.9■□□□□ 0.3
NEK3-208ENST00000618534 HPRT1P00492 218 aa16.9■□□□□ 0.3
NEK3-208ENST00000618534 ADH4P08319 380 aa16.9■□□□□ 0.3
NEK3-208ENST00000618534 ADMP35318 185 aa16.9■□□□□ 0.3
NEK3-208ENST00000618534 FABP6P51161 128 aa16.9■□□□□ 0.3
NEK3-208ENST00000618534 ZDHHC11Q9H8X9 412 aa16.9■□□□□ 0.3
NEK3-208ENST00000618534 TET2Q6N021 2002 aaPredicted RBP16.9■□□□□ 0.3
NEK3-208ENST00000618534 M0R1X1 148 aa16.9■□□□□ 0.3
NEK3-208ENST00000618534 IGHV3-13P01766 116 aa16.9■□□□□ 0.3
NEK3-208ENST00000618534 IGHV3-7P01780 117 aa16.9■□□□□ 0.3
NEK3-208ENST00000618534 RPP30P78346 268 aaKnown RBP16.9■□□□□ 0.3
NEK3-208ENST00000618534 ABHD12Q8N2K0 398 aa16.9■□□□□ 0.3
NEK3-208ENST00000618534 FER1L6-AS2Q96M78 137 aa16.9■□□□□ 0.3
NEK3-208ENST00000618534 GNG12Q9UBI6 72 aa16.9■□□□□ 0.3
NEK3-208ENST00000618534 PRRC2CQ9Y520 2896 aaKnown RBP16.9■□□□□ 0.3
NEK3-208ENST00000618534 SOX15O60248 233 aa16.89■□□□□ 0.29
NEK3-208ENST00000618534 CXorf1O96002 111 aa16.89■□□□□ 0.29
NEK3-208ENST00000618534 KITLGP21583 273 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms