RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 TET1Q8NFU7 2136 aa15.13■□□□□ 0.01
ATXN2-227ENST00000616825 PDLIM4P50479 330 aa15.13■□□□□ 0.01
ATXN2-227ENST00000616825 AMMECR1LQ6DCA0 310 aa15.13■□□□□ 0.01
ATXN2-227ENST00000616825 PNKDQ8N490 385 aa15.13■□□□□ 0.01
ATXN2-227ENST00000616825 GATAD1Q8WUU5 269 aa15.13■□□□□ 0.01
ATXN2-227ENST00000616825 CHCHD2Q9Y6H1 151 aaPredicted RBP15.13■□□□□ 0.01
ATXN2-227ENST00000616825 CSRP3P50461 194 aa15.13■□□□□ 0.01
ATXN2-227ENST00000616825 C19orf54Q5BKX5 351 aa15.13■□□□□ 0.01
ATXN2-227ENST00000616825 LHFPL5Q8TAF8 219 aa15.13■□□□□ 0.01
ATXN2-227ENST00000616825 C19orf24Q9BVV8 132 aa15.13■□□□□ 0.01
ATXN2-227ENST00000616825 COL25A1Q9BXS0 654 aaPredicted RBP15.13■□□□□ 0.01
ATXN2-227ENST00000616825 SHANK3Q9BYB0 1731 aa15.13■□□□□ 0.01
ATXN2-227ENST00000616825 HKR1P10072 659 aa15.12■□□□□ 0.01
ATXN2-227ENST00000616825 MYO7BQ6PIF6 2116 aa15.12■□□□□ 0.01
ATXN2-227ENST00000616825 ZNRF1Q8ND25 227 aa15.12■□□□□ 0.01
ATXN2-227ENST00000616825 TMEM45BQ96B21 275 aa15.12■□□□□ 0.01
ATXN2-227ENST00000616825 RAMP1O60894 148 aa15.12■□□□□ 0.01
ATXN2-227ENST00000616825 ACAA1P09110 424 aaPredicted RBP15.12■□□□□ 0.01
ATXN2-227ENST00000616825 NPIPB3Q92617 1050 aa15.12■□□□□ 0.01
ATXN2-227ENST00000616825 ZNF703Q9H7S9 590 aaPredicted RBP15.12■□□□□ 0.01
ATXN2-227ENST00000616825 UBR3Q6ZT12 1888 aa15.12■□□□□ 0.01
ATXN2-227ENST00000616825 DOCK5Q9H7D0 1870 aa15.12■□□□□ 0.01
ATXN2-227ENST00000616825 ZNF324O75467 553 aaPredicted RBP15.12■□□□□ 0.01
ATXN2-227ENST00000616825 BTF3P20290 206 aaKnown RBP15.12■□□□□ 0.01
ATXN2-227ENST00000616825 AKIRIN1Q9H9L7 192 aaPredicted RBP15.12■□□□□ 0.01
ATXN2-227ENST00000616825 PHLDA3Q9Y5J5 127 aa15.12■□□□□ 0.01
ATXN2-227ENST00000616825 ADAMTS7Q9UKP4 1686 aa15.12■□□□□ 0.01
ATXN2-227ENST00000616825 NPIPB11E5RHQ5 1161 aa15.12■□□□□ 0.01
ATXN2-227ENST00000616825 NPPCP23582 126 aa15.12■□□□□ 0.01
ATXN2-227ENST00000616825 APOBEC3AP31941 199 aaPredicted RBP15.12■□□□□ 0.01
ATXN2-227ENST00000616825 C2orf83Q53S99 150 aa15.12■□□□□ 0.01
ATXN2-227ENST00000616825 TMEM54Q969K7 222 aa15.12■□□□□ 0.01
ATXN2-227ENST00000616825 SIGLEC12Q96PQ1 595 aa15.12■□□□□ 0.01
ATXN2-227ENST00000616825 FXYD3Q14802 87 aa15.11■□□□□ 0.01
ATXN2-227ENST00000616825 LY6EQ16553 131 aa15.11■□□□□ 0.01
ATXN2-227ENST00000616825 OR5P3Q8WZ94 311 aa15.11■□□□□ 0.01
ATXN2-227ENST00000616825 RTN4RQ9BZR6 473 aa15.11■□□□□ 0.01
ATXN2-227ENST00000616825 MIA3Q5JRA6 1907 aa15.11■□□□□ 0.01
ATXN2-227ENST00000616825 MARF1Q9Y4F3 1742 aaKnown RBP15.11■□□□□ 0.01
ATXN2-227ENST00000616825 KIF13BQ9NQT8 1826 aa15.11■□□□□ 0.01
ATXN2-227ENST00000616825 LOC105371267A0A1B0GV96 52 aa15.11■□□□□ 0.01
ATXN2-227ENST00000616825 NPIPB9F8W1W9 429 aa15.11■□□□□ 0.01
ATXN2-227ENST00000616825 CA7P43166 264 aa15.11■□□□□ 0.01
ATXN2-227ENST00000616825 LINC01560Q8TB33 94 aa15.11■□□□□ 0.01
ATXN2-227ENST00000616825 SPSB4Q96A44 273 aa15.11■□□□□ 0.01
ATXN2-227ENST00000616825 SMIM8Q96KF7 97 aa15.11■□□□□ 0.01
ATXN2-227ENST00000616825 IGHV3OR16-12A0A075B7B8 117 aa15.11■□□□□ 0.01
ATXN2-227ENST00000616825 IGKV3D-11A0A0A0MRZ8 115 aa15.11■□□□□ 0.01
ATXN2-227ENST00000616825 TP53RKQ96S44 253 aa15.11■□□□□ 0.01
ATXN2-227ENST00000616825 CEACAM1P13688 526 aa15.1■□□□□ 0.01
ATXN2-227ENST00000616825 NMUP48645 174 aa15.1■□□□□ 0.01
ATXN2-227ENST00000616825 PUSL1Q8N0Z8 303 aaKnown RBP15.1■□□□□ 0.01
ATXN2-227ENST00000616825 OR51M1Q9H341 326 aa15.1■□□□□ 0.01
ATXN2-227ENST00000616825 ZNF207O43670 478 aaKnown RBP15.1■□□□□ 0.01
ATXN2-227ENST00000616825 CD74P04233 296 aa15.1■□□□□ 0.01
ATXN2-227ENST00000616825 RPS20P60866 119 aaKnown RBP15.1■□□□□ 0.01
ATXN2-227ENST00000616825 FAM27E3Q08E93 113 aa15.1■□□□□ 0.01
ATXN2-227ENST00000616825 TMEM177Q53S58 311 aa15.1■□□□□ 0.01
ATXN2-227ENST00000616825 ZNF818PQ6ZRF7 136 aa15.1■□□□□ 0.01
ATXN2-227ENST00000616825 RAX2Q96IS3 184 aa15.1■□□□□ 0.01
ATXN2-227ENST00000616825 MEGF10Q96KG7 1140 aa15.1■□□□□ 0.01
ATXN2-227ENST00000616825 IGKV3D-15A0A087WSY6 115 aa15.1■□□□□ 0.01
ATXN2-227ENST00000616825 IGKV3-15P01624 115 aa15.1■□□□□ 0.01
ATXN2-227ENST00000616825 CECR9P0C854 216 aa15.1■□□□□ 0.01
ATXN2-227ENST00000616825 H2BFSP57053 126 aa15.1■□□□□ 0.01
ATXN2-227ENST00000616825 HSPB9Q9BQS6 159 aa15.1■□□□□ 0.01
ATXN2-227ENST00000616825 ATG101Q9BSB4 218 aa15.1■□□□□ 0.01
ATXN2-227ENST00000616825 IGHV3-35A0A0C4DH35 117 aa15.09■□□□□ 0.01
ATXN2-227ENST00000616825 GCGP01275 180 aa15.09■□□□□ 0.01
ATXN2-227ENST00000616825 ATP5G2Q06055 141 aa15.09■□□□□ 0.01
ATXN2-227ENST00000616825 GALNT14Q96FL9 552 aa15.09■□□□□ 0.01
ATXN2-227ENST00000616825 NABP2Q9BQ15 211 aa15.09■□□□□ 0.01
ATXN2-227ENST00000616825 MED13LQ71F56 2210 aa15.09■□□□□ 0.01
ATXN2-227ENST00000616825 HAX1O00165 279 aa15.09■□□□□ 0.01
ATXN2-227ENST00000616825 GDF9O60383 454 aa15.09■□□□□ 0.01
ATXN2-227ENST00000616825 IGLV3-19P01714 112 aa15.09■□□□□ 0.01
ATXN2-227ENST00000616825 LTBRP36941 435 aa15.09■□□□□ 0.01
ATXN2-227ENST00000616825 SMIM12Q96EX1 92 aa15.09■□□□□ 0.01
ATXN2-227ENST00000616825 CELA3AP09093 270 aa15.09■□□□□ 0.01
ATXN2-227ENST00000616825 TSPOP30536 169 aa15.09■□□□□ 0.01
ATXN2-227ENST00000616825 PCNX1Q96RV3 2341 aa15.09■□□□□ 0.01
ATXN2-227ENST00000616825 NOTCH2Q04721 2471 aa15.09■□□□□ 0.01
ATXN2-227ENST00000616825 LAMB2P55268 1798 aa15.09■□□□□ 0.01
ATXN2-227ENST00000616825 TRGC2P03986 189 aa15.09■□□□□ 0.01
ATXN2-227ENST00000616825 CRYBB3P26998 211 aa15.09■□□□□ 0.01
ATXN2-227ENST00000616825 SRSF12Q8WXF0 261 aaKnown RBP15.09■□□□□ 0.01
ATXN2-227ENST00000616825 H0YL77 283 aa15.08■□□□□ 0.01
ATXN2-227ENST00000616825 REG1AP05451 166 aa15.08■□□□□ 0.01
ATXN2-227ENST00000616825 KLK2P20151 261 aa15.08■□□□□ 0.01
ATXN2-227ENST00000616825 TNFSF10P50591 281 aa15.08■□□□□ 0.01
ATXN2-227ENST00000616825 PSG9Q00887 426 aa15.08■□□□□ 0.01
ATXN2-227ENST00000616825 ZNF146Q15072 292 aa15.08■□□□□ 0.01
ATXN2-227ENST00000616825 CENPVQ7Z7K6 275 aaPredicted RBP15.08■□□□□ 0.01
ATXN2-227ENST00000616825 TMEM106BQ9NUM4 274 aa15.08■□□□□ 0.01
ATXN2-227ENST00000616825 DPM3Q9P2X0 92 aa15.08■□□□□ 0.01
ATXN2-227ENST00000616825 TDRD15B5MCY1 1934 aaKnown RBP15.08■□□□□ 0
ATXN2-227ENST00000616825 OR4C46A6NHA9 309 aa15.08■□□□□ 0
ATXN2-227ENST00000616825 RND3P61587 244 aa15.08■□□□□ 0
ATXN2-227ENST00000616825 TMEM187Q14656 261 aa15.08■□□□□ 0
ATXN2-227ENST00000616825 VKORC1L1Q8N0U8 176 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms