RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 MPPED1O15442 326 aa13.95□□□□□ -0.18
TRAPPC3-209ENST00000616395 CXCL3P19876 107 aa13.95□□□□□ -0.18
TRAPPC3-209ENST00000616395 SSX2Q16385 188 aa13.95□□□□□ -0.18
TRAPPC3-209ENST00000616395 PHLDA2Q53GA4 152 aa13.95□□□□□ -0.18
TRAPPC3-209ENST00000616395 C10orf99Q6UWK7 81 aa13.95□□□□□ -0.18
TRAPPC3-209ENST00000616395 TCF23Q7RTU1 214 aa13.95□□□□□ -0.18
TRAPPC3-209ENST00000616395 OR10A7Q8NGE5 316 aa13.95□□□□□ -0.18
TRAPPC3-209ENST00000616395 OR4X2Q8NGF9 303 aa13.95□□□□□ -0.18
TRAPPC3-209ENST00000616395 OR13A1Q8NGR1 328 aa13.95□□□□□ -0.18
TRAPPC3-209ENST00000616395 TMEM230Q96A57 120 aa13.95□□□□□ -0.18
TRAPPC3-209ENST00000616395 CYYR1Q96J86 154 aa13.95□□□□□ -0.18
TRAPPC3-209ENST00000616395 MCRIP2Q9BUT9 160 aaKnown RBP13.95□□□□□ -0.18
TRAPPC3-209ENST00000616395 TOLLIPQ9H0E2 274 aa13.95□□□□□ -0.18
TRAPPC3-209ENST00000616395 ZFP57Q9NU63 452 aa13.95□□□□□ -0.18
TRAPPC3-209ENST00000616395 ZMAT5Q9UDW3 170 aaKnown RBP13.95□□□□□ -0.18
TRAPPC3-209ENST00000616395 IGKV1-6A0A0C4DH72 117 aa13.94□□□□□ -0.18
TRAPPC3-209ENST00000616395 C3orf85A0A1B0GTC6 90 aa13.94□□□□□ -0.18
TRAPPC3-209ENST00000616395 DUXBA0A1W2PPF3 345 aa13.94□□□□□ -0.18
TRAPPC3-209ENST00000616395 HSD17B6O14756 317 aa13.94□□□□□ -0.18
TRAPPC3-209ENST00000616395 ATG12O94817 140 aa13.94□□□□□ -0.18
TRAPPC3-209ENST00000616395 PET100P0DJ07 73 aa13.94□□□□□ -0.18
TRAPPC3-209ENST00000616395 RAB7AP51149 207 aa13.94□□□□□ -0.18
TRAPPC3-209ENST00000616395 CATR1Q13166 79 aa13.94□□□□□ -0.18
TRAPPC3-209ENST00000616395 LDLRAD2Q5SZI1 272 aa13.94□□□□□ -0.18
TRAPPC3-209ENST00000616395 CORO2AQ92828 525 aa13.94□□□□□ -0.18
TRAPPC3-209ENST00000616395 LIN7CQ9NUP9 197 aaKnown RBP13.94□□□□□ -0.18
TRAPPC3-209ENST00000616395 CALYQ9NYX4 217 aa13.94□□□□□ -0.18
TRAPPC3-209ENST00000616395 LINC00312Q9Y6C7 94 aa13.94□□□□□ -0.18
TRAPPC3-209ENST00000616395 HYDINQ4G0P3 5121 aa13.94□□□□□ -0.18
TRAPPC3-209ENST00000616395 TRAV39A0A0B4J263 110 aa13.93□□□□□ -0.18
TRAPPC3-209ENST00000616395 KBTBD11-OT1A0A1B0GTJ5 212 aa13.93□□□□□ -0.18
TRAPPC3-209ENST00000616395 C13orf42A0A1B0GVH6 325 aa13.93□□□□□ -0.18
TRAPPC3-209ENST00000616395 YPEL1O60688 119 aa13.93□□□□□ -0.18
TRAPPC3-209ENST00000616395 GNRHRP30968 328 aa13.93□□□□□ -0.18
TRAPPC3-209ENST00000616395 CD300CQ08708 224 aa13.93□□□□□ -0.18
TRAPPC3-209ENST00000616395 TCTEX1D1Q8N7M0 179 aa13.93□□□□□ -0.18
TRAPPC3-209ENST00000616395 BVESQ8NE79 360 aa13.93□□□□□ -0.18
TRAPPC3-209ENST00000616395 OR1L1Q8NH94 360 aa13.93□□□□□ -0.18
TRAPPC3-209ENST00000616395 MALSU1Q96EH3 234 aa13.93□□□□□ -0.18
TRAPPC3-209ENST00000616395 YPEL2Q96QA6 119 aa13.93□□□□□ -0.18
TRAPPC3-209ENST00000616395 PRR25Q96S07 402 aa13.93□□□□□ -0.18
TRAPPC3-209ENST00000616395 SPIN2AQ99865 258 aa13.93□□□□□ -0.18
TRAPPC3-209ENST00000616395 SPIN2BQ9BPZ2 258 aa13.93□□□□□ -0.18
TRAPPC3-209ENST00000616395 OR1A1Q9P1Q5 309 aa13.93□□□□□ -0.18
TRAPPC3-209ENST00000616395 RAMP3O60896 148 aa13.92□□□□□ -0.18
TRAPPC3-209ENST00000616395 OR8U9P0C7N5 309 aa13.92□□□□□ -0.18
TRAPPC3-209ENST00000616395 THBS3P49746 956 aa13.92□□□□□ -0.18
TRAPPC3-209ENST00000616395 DLX6P56179 175 aa13.92□□□□□ -0.18
TRAPPC3-209ENST00000616395 TBC1D26Q86UD7 250 aa13.92□□□□□ -0.18
TRAPPC3-209ENST00000616395 ZNF695Q8IW36 515 aa13.92□□□□□ -0.18
TRAPPC3-209ENST00000616395 ZNF645Q8N7E2 425 aa13.92□□□□□ -0.18
TRAPPC3-209ENST00000616395 OR52M1Q8NGK5 317 aa13.92□□□□□ -0.18
TRAPPC3-209ENST00000616395 OR8U1Q8NH10 309 aa13.92□□□□□ -0.18
TRAPPC3-209ENST00000616395 THAP6Q8TBB0 222 aa13.92□□□□□ -0.18
TRAPPC3-209ENST00000616395 CCL28Q9NRJ3 127 aa13.92□□□□□ -0.18
TRAPPC3-209ENST00000616395 TBL2Q9Y4P3 447 aaKnown RBP13.92□□□□□ -0.18
TRAPPC3-209ENST00000616395 HUWE1Q7Z6Z7 4374 aaKnown RBP13.92□□□□□ -0.18
TRAPPC3-209ENST00000616395 hCG_1809904A0A1W2PP81 198 aa13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 A0A1W2PPE2 198 aa13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 A0A1W2PR64 198 aa13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 A0A1W2PRV1 198 aa13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 H0Y980 276 aa13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 ITGB1BP1O14713 200 aa13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 ARG1P05089 322 aa13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 SERPINE2P07093 398 aa13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 NUP62P37198 522 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 DYNLT3P51808 116 aa13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 SUPT4H1P63272 117 aaKnown RBP13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 SMCO1Q147U7 214 aa13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 LY6G6FQ5SQ64 297 aa13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 ZNF818PQ6ZRF7 136 aa13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 LRTM2Q8N967 370 aa13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 DRAXINQ8NBI3 349 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 IL22RA2Q969J5 263 aa13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 RCHY1Q96PM5 261 aa13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 NMES1Q9C002 83 aa13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 TMED3Q9Y3Q3 217 aa13.91□□□□□ -0.18
TRAPPC3-209ENST00000616395 DBX1A6NMT0 343 aa13.9□□□□□ -0.18
TRAPPC3-209ENST00000616395 C15orf65H3BRN8 121 aa13.9□□□□□ -0.18
TRAPPC3-209ENST00000616395 RLN2P04090 185 aa13.9□□□□□ -0.18
TRAPPC3-209ENST00000616395 OR5AC1P0C628 307 aa13.9□□□□□ -0.18
TRAPPC3-209ENST00000616395 SSTR5P35346 364 aa13.9□□□□□ -0.18
TRAPPC3-209ENST00000616395 ZFAND6Q6FIF0 208 aa13.9□□□□□ -0.18
TRAPPC3-209ENST00000616395 OR52L2PQ8NGH6 319 aa13.9□□□□□ -0.18
TRAPPC3-209ENST00000616395 C2orf50Q96LR7 162 aa13.9□□□□□ -0.18
TRAPPC3-209ENST00000616395 TMEM222Q9H0R3 208 aa13.9□□□□□ -0.18
TRAPPC3-209ENST00000616395 IDI2-AS1Q9NZ38 188 aa13.9□□□□□ -0.18
TRAPPC3-209ENST00000616395 ODF3BA8MYP8 253 aa13.9□□□□□ -0.19
TRAPPC3-209ENST00000616395 PGLYRP1O75594 196 aaPredicted RBP13.9□□□□□ -0.19
TRAPPC3-209ENST00000616395 SIX6O95475 246 aa13.9□□□□□ -0.19
TRAPPC3-209ENST00000616395 HOXB5P09067 269 aa13.9□□□□□ -0.19
TRAPPC3-209ENST00000616395 RPA2P15927 270 aa13.9□□□□□ -0.19
TRAPPC3-209ENST00000616395 F2RP25116 425 aa13.9□□□□□ -0.19
TRAPPC3-209ENST00000616395 TMEM187Q14656 261 aa13.9□□□□□ -0.19
TRAPPC3-209ENST00000616395 Q3ZCU0 254 aa13.9□□□□□ -0.19
TRAPPC3-209ENST00000616395 THOC7Q6I9Y2 204 aaKnown RBP13.9□□□□□ -0.19
TRAPPC3-209ENST00000616395 ZNF66Q6ZN08 573 aa13.9□□□□□ -0.19
TRAPPC3-209ENST00000616395 RNASE11Q8TAA1 199 aaKnown RBP13.9□□□□□ -0.19
TRAPPC3-209ENST00000616395 RFESDQ8TAC1 157 aa13.9□□□□□ -0.19
TRAPPC3-209ENST00000616395 CD300LFQ8TDQ1 290 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms