RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 VMA21Q3ZAQ7 101 aa13.2□□□□□ -0.3
LHX1-202ENST00000616237 ZNF818PQ6ZRF7 136 aa13.2□□□□□ -0.3
LHX1-202ENST00000616237 VKORC1L1Q8N0U8 176 aa13.2□□□□□ -0.3
LHX1-202ENST00000616237 OR11H1Q8NG94 326 aa13.2□□□□□ -0.3
LHX1-202ENST00000616237 OR5M8Q8NGP6 311 aa13.2□□□□□ -0.3
LHX1-202ENST00000616237 AP3S1Q92572 193 aa13.2□□□□□ -0.3
LHX1-202ENST00000616237 DCUN1D5Q9BTE7 237 aa13.2□□□□□ -0.3
LHX1-202ENST00000616237 ALX4Q9H161 411 aaPredicted RBP13.2□□□□□ -0.3
LHX1-202ENST00000616237 PRELID3BQ9Y3B1 194 aa13.2□□□□□ -0.3
LHX1-202ENST00000616237 SMIM31A0A1B0GVY4 71 aa13.2□□□□□ -0.3
LHX1-202ENST00000616237 HLA-DMAP28067 261 aa13.2□□□□□ -0.3
LHX1-202ENST00000616237 GNRHRP30968 328 aa13.2□□□□□ -0.3
LHX1-202ENST00000616237 MZT2AQ6P582 158 aa13.2□□□□□ -0.3
LHX1-202ENST00000616237 TMEM17Q86X19 198 aa13.2□□□□□ -0.3
LHX1-202ENST00000616237 ZBTB34Q8NCN2 500 aa13.2□□□□□ -0.3
LHX1-202ENST00000616237 OR5T1Q8NG75 326 aa13.2□□□□□ -0.3
LHX1-202ENST00000616237 MS4A10Q96PG2 267 aa13.2□□□□□ -0.3
LHX1-202ENST00000616237 ZNF2Q9BSG1 426 aaPredicted RBP13.2□□□□□ -0.3
LHX1-202ENST00000616237 MIXL1Q9H2W2 232 aa13.2□□□□□ -0.3
LHX1-202ENST00000616237 ZNF430Q9H8G1 570 aaPredicted RBP13.2□□□□□ -0.3
LHX1-202ENST00000616237 AURKAIP1Q9NWT8 199 aaPredicted RBP13.2□□□□□ -0.3
LHX1-202ENST00000616237 FAM25AB3EWG3 89 aa13.19□□□□□ -0.3
LHX1-202ENST00000616237 FAM25CB3EWG5 89 aa13.19□□□□□ -0.3
LHX1-202ENST00000616237 FAM25GB3EWG6 89 aa13.19□□□□□ -0.3
LHX1-202ENST00000616237 RAMP3O60896 148 aa13.19□□□□□ -0.3
LHX1-202ENST00000616237 DUS4LO95620 317 aaKnown RBP13.19□□□□□ -0.3
LHX1-202ENST00000616237 HOXD3P31249 432 aaPredicted RBP13.19□□□□□ -0.3
LHX1-202ENST00000616237 HRH1P35367 487 aa13.19□□□□□ -0.3
LHX1-202ENST00000616237 RAB25P57735 213 aa13.19□□□□□ -0.3
LHX1-202ENST00000616237 TAS2R46P59540 309 aa13.19□□□□□ -0.3
LHX1-202ENST00000616237 KRTAP10-11P60412 298 aa13.19□□□□□ -0.3
LHX1-202ENST00000616237 OR5H2Q8NGV7 314 aa13.19□□□□□ -0.3
LHX1-202ENST00000616237 OR4S2Q8NH73 311 aa13.19□□□□□ -0.3
LHX1-202ENST00000616237 MOB3AQ96BX8 217 aa13.19□□□□□ -0.3
LHX1-202ENST00000616237 SCPEP1Q9HB40 452 aa13.19□□□□□ -0.3
LHX1-202ENST00000616237 ADAM30Q9UKF2 790 aa13.19□□□□□ -0.3
LHX1-202ENST00000616237 SULT1C2O00338 296 aa13.18□□□□□ -0.3
LHX1-202ENST00000616237 CTDSP2O14595 271 aa13.18□□□□□ -0.3
LHX1-202ENST00000616237 APELAP0DMC3 54 aa13.18□□□□□ -0.3
LHX1-202ENST00000616237 RPL5P46777 297 aaKnown RBP13.18□□□□□ -0.3
LHX1-202ENST00000616237 TNXAQ16473 311 aa13.18□□□□□ -0.3
LHX1-202ENST00000616237 C10orf55Q5SWW7 151 aa13.18□□□□□ -0.3
LHX1-202ENST00000616237 PYHIN1Q6K0P9 492 aa13.18□□□□□ -0.3
LHX1-202ENST00000616237 OR1N2Q8NGR9 330 aa13.18□□□□□ -0.3
LHX1-202ENST00000616237 RAB2BQ8WUD1 216 aa13.18□□□□□ -0.3
LHX1-202ENST00000616237 ABHD1Q96SE0 405 aa13.18□□□□□ -0.3
LHX1-202ENST00000616237 FXYD6Q9H0Q3 95 aa13.18□□□□□ -0.3
LHX1-202ENST00000616237 EXTL2Q9UBQ6 330 aa13.18□□□□□ -0.3
LHX1-202ENST00000616237 MSGN1A6NI15 193 aa13.17□□□□□ -0.3
LHX1-202ENST00000616237 IGHV3-11P01762 117 aa13.17□□□□□ -0.3
LHX1-202ENST00000616237 TMBIM6P55061 237 aa13.17□□□□□ -0.3
LHX1-202ENST00000616237 TPPP2P59282 170 aa13.17□□□□□ -0.3
LHX1-202ENST00000616237 HERV-K104P61576 105 aa13.17□□□□□ -0.3
LHX1-202ENST00000616237 EGFEM1PQ0D2K5 195 aa13.17□□□□□ -0.3
LHX1-202ENST00000616237 RNASE12Q5GAN4 147 aaKnown RBP13.17□□□□□ -0.3
LHX1-202ENST00000616237 SPAG16Q8N0X2 631 aa13.17□□□□□ -0.3
LHX1-202ENST00000616237 PUSL1Q8N0Z8 303 aaKnown RBP13.17□□□□□ -0.3
LHX1-202ENST00000616237 POC5Q8NA72 575 aa13.17□□□□□ -0.3
LHX1-202ENST00000616237 DYNC2LI1Q8TCX1 351 aa13.17□□□□□ -0.3
LHX1-202ENST00000616237 SRSF12Q8WXF0 261 aaKnown RBP13.17□□□□□ -0.3
LHX1-202ENST00000616237 RHOVQ96L33 236 aa13.17□□□□□ -0.3
LHX1-202ENST00000616237 KLK11Q9UBX7 282 aa13.17□□□□□ -0.3
LHX1-202ENST00000616237 RBMXL2O75526 392 aaKnown RBP13.16□□□□□ -0.3
LHX1-202ENST00000616237 TRGV3P03979 118 aa13.16□□□□□ -0.3
LHX1-202ENST00000616237 LGALS1P09382 135 aaKnown RBP13.16□□□□□ -0.3
LHX1-202ENST00000616237 RCVRNP35243 200 aa13.16□□□□□ -0.3
LHX1-202ENST00000616237 KIR2DS2P43631 304 aa13.16□□□□□ -0.3
LHX1-202ENST00000616237 ZNF616Q08AN1 781 aa13.16□□□□□ -0.3
LHX1-202ENST00000616237 LAX1Q8IWV1 398 aa13.16□□□□□ -0.3
LHX1-202ENST00000616237 MMD2Q8IY49 270 aa13.16□□□□□ -0.3
LHX1-202ENST00000616237 OR6F1Q8NGZ6 308 aa13.16□□□□□ -0.3
LHX1-202ENST00000616237 OR52I2Q8NH67 350 aa13.16□□□□□ -0.3
LHX1-202ENST00000616237 TMEM167AQ8TBQ9 72 aa13.16□□□□□ -0.3
LHX1-202ENST00000616237 TMEM68Q96MH6 324 aa13.16□□□□□ -0.3
LHX1-202ENST00000616237 MCRIP2Q9BUT9 160 aaKnown RBP13.16□□□□□ -0.3
LHX1-202ENST00000616237 SLA2Q9H6Q3 261 aa13.16□□□□□ -0.3
LHX1-202ENST00000616237 IGHV4OR15-8A0A075B7B6 117 aa13.15□□□□□ -0.3
LHX1-202ENST00000616237 A0A087WW49 117 aa13.15□□□□□ -0.3
LHX1-202ENST00000616237 E7EUB6 86 aa13.15□□□□□ -0.3
LHX1-202ENST00000616237 RBFOX2O43251 390 aaKnown RBP eCLIP13.15□□□□□ -0.3
LHX1-202ENST00000616237 KBTBD11O94819 623 aa13.15□□□□□ -0.3
LHX1-202ENST00000616237 OR2A4O95047 310 aa13.15□□□□□ -0.3
LHX1-202ENST00000616237 DEFA5Q01523 94 aa13.15□□□□□ -0.3
LHX1-202ENST00000616237 SSX9Q7RTT3 188 aa13.15□□□□□ -0.3
LHX1-202ENST00000616237 ADAD2Q8NCV1 583 aaKnown RBP13.15□□□□□ -0.3
LHX1-202ENST00000616237 OR51H1Q8NH63 302 aa13.15□□□□□ -0.3
LHX1-202ENST00000616237 OR2A7Q96R45 310 aa13.15□□□□□ -0.3
LHX1-202ENST00000616237 BCL7BQ9BQE9 202 aa13.15□□□□□ -0.3
LHX1-202ENST00000616237 ZNF355PQ9NSJ1 428 aa13.15□□□□□ -0.3
LHX1-202ENST00000616237 A0A1B0GW64 132 aa13.14□□□□□ -0.31
LHX1-202ENST00000616237 H3BMQ9 156 aa13.14□□□□□ -0.31
LHX1-202ENST00000616237 H3BUA1 57 aa13.14□□□□□ -0.31
LHX1-202ENST00000616237 PGLYRP1O75594 196 aaPredicted RBP13.14□□□□□ -0.31
LHX1-202ENST00000616237 BRI3O95415 125 aa13.14□□□□□ -0.31
LHX1-202ENST00000616237 MYOD1P15172 320 aa13.14□□□□□ -0.31
LHX1-202ENST00000616237 CD40LGP29965 261 aa13.14□□□□□ -0.31
LHX1-202ENST00000616237 CATR1Q13166 79 aa13.14□□□□□ -0.31
LHX1-202ENST00000616237 REC114Q7Z4M0 266 aa13.14□□□□□ -0.31
LHX1-202ENST00000616237 PHB2Q99623 299 aa13.14□□□□□ -0.31
LHX1-202ENST00000616237 M0QYG6 137 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms