RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 ZNF585BQ52M93 769 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 ZNF497Q6ZNH5 498 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 Q6ZPA2 131 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 ZNF439Q8NDP4 499 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 SMPD2O60906 423 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 OR10J4P0C629 311 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 TNFSF4P23510 183 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 CD81P60033 236 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 CISD2Q8N5K1 135 aaKnown RBP10.55□□□□□ -0.72
MSH6-213ENST00000614496 SARAFQ96BY9 339 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 HSPB9Q9BQS6 159 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 SH2D2AQ9NP31 389 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 PRUNE2Q8WUY3 3088 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 ZNF318Q5VUA4 2279 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 TRBV24-1A0A075B6N3 115 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 TRAV1-1A0A0B4J248 108 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 NPY1RP25929 384 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 BCL2L2Q92843 193 aaPredicted RBP10.55□□□□□ -0.72
MSH6-213ENST00000614496 COMMD5Q9GZQ3 224 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 CLCF1Q9UBD9 225 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 NBASA2RRP1 2371 aa10.54□□□□□ -0.72
MSH6-213ENST00000614496 CACNA1HO95180 2353 aa10.54□□□□□ -0.72
MSH6-213ENST00000614496 NTN3O00634 580 aaPredicted RBP10.54□□□□□ -0.72
MSH6-213ENST00000614496 GCGP01275 180 aa10.54□□□□□ -0.72
MSH6-213ENST00000614496 SRP14P37108 136 aaKnown RBP10.54□□□□□ -0.72
MSH6-213ENST00000614496 MRPS11P82912 194 aaKnown RBP10.54□□□□□ -0.72
MSH6-213ENST00000614496 C14orf144Q96I85 54 aa10.54□□□□□ -0.72
MSH6-213ENST00000614496 DERL1Q9BUN8 251 aa10.54□□□□□ -0.72
MSH6-213ENST00000614496 CXorf1O96002 111 aa10.54□□□□□ -0.72
MSH6-213ENST00000614496 NRN1LQ496H8 165 aa10.54□□□□□ -0.72
MSH6-213ENST00000614496 RND1Q92730 232 aa10.54□□□□□ -0.72
MSH6-213ENST00000614496 SLC35D1Q9NTN3 355 aa10.54□□□□□ -0.72
MSH6-213ENST00000614496 NAGKQ9UJ70 344 aa10.54□□□□□ -0.72
MSH6-213ENST00000614496 TRGV10A0A0A0MS01 117 aa10.54□□□□□ -0.72
MSH6-213ENST00000614496 CD33P20138 364 aa10.54□□□□□ -0.72
MSH6-213ENST00000614496 GZMHP20718 246 aa10.54□□□□□ -0.72
MSH6-213ENST00000614496 NUBP1P53384 320 aa10.54□□□□□ -0.72
MSH6-213ENST00000614496 DEFB109BQ30KR1 87 aa10.54□□□□□ -0.72
MSH6-213ENST00000614496 ZNRF1Q8ND25 227 aa10.54□□□□□ -0.72
MSH6-213ENST00000614496 SLC35E1Q96K37 410 aa10.54□□□□□ -0.72
MSH6-213ENST00000614496 WIPI2Q9Y4P8 454 aa10.54□□□□□ -0.72
MSH6-213ENST00000614496 SLC31A2O15432 143 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 IGKV1D-33P01593 117 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 IGKV1-33P01594 117 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 FXYD3Q14802 87 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 RPEL1Q2QD12 228 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 COLCA1Q6ZS62 124 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 HAPLN4Q86UW8 402 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 OR8I2Q8N0Y5 310 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 OR4S2Q8NH73 311 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 GMPPAQ96IJ6 420 aaPredicted RBP10.53□□□□□ -0.72
MSH6-213ENST00000614496 NOL4LQ96MY1 436 aaPredicted RBP10.53□□□□□ -0.72
MSH6-213ENST00000614496 SCO2A0A1W2PP80 73 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 TMEM210A6NLX4 147 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 PPIHO43447 177 aaKnown RBP10.53□□□□□ -0.72
MSH6-213ENST00000614496 ZNF253O75346 499 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 SUMO1P63165 101 aaKnown RBP10.53□□□□□ -0.72
MSH6-213ENST00000614496 INO80CQ6PI98 192 aaPredicted RBP10.53□□□□□ -0.72
MSH6-213ENST00000614496 TEPPQ6URK8 271 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 IGKV3D-15A0A087WSY6 115 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 HPRT1P00492 218 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 IL3RAP26951 378 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 JOSD1Q15040 202 aaPredicted RBP10.53□□□□□ -0.72
MSH6-213ENST00000614496 GABRA6Q16445 453 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 FAM201AQ5SY85 155 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 GTF3AQ92664 365 aaKnown RBP10.53□□□□□ -0.72
MSH6-213ENST00000614496 CORO2AQ92828 525 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 OR6C3Q9NZP0 311 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 TIMM9Q9Y5J7 89 aa10.53□□□□□ -0.72
MSH6-213ENST00000614496 GTF3C1Q12789 2109 aa10.52□□□□□ -0.72
MSH6-213ENST00000614496 C21orf140B9A014 251 aa10.52□□□□□ -0.72
MSH6-213ENST00000614496 C9orf172C9J069 976 aa10.52□□□□□ -0.72
MSH6-213ENST00000614496 TOX4O94842 621 aa10.52□□□□□ -0.72
MSH6-213ENST00000614496 IL18BPO95998 194 aa10.52□□□□□ -0.72
MSH6-213ENST00000614496 ADH4P08319 380 aa10.52□□□□□ -0.72
MSH6-213ENST00000614496 OR10J1P30954 320 aa10.52□□□□□ -0.72
MSH6-213ENST00000614496 TAS2R45P59539 299 aa10.52□□□□□ -0.72
MSH6-213ENST00000614496 FAM214BQ7L5A3 538 aa10.52□□□□□ -0.72
MSH6-213ENST00000614496 OR5AU1Q8NGC0 362 aa10.52□□□□□ -0.72
MSH6-213ENST00000614496 SFRP2Q96HF1 295 aa10.52□□□□□ -0.72
MSH6-213ENST00000614496 SCRT1Q9BWW7 348 aa10.52□□□□□ -0.72
MSH6-213ENST00000614496 NPVFQ9HCQ7 196 aa10.52□□□□□ -0.72
MSH6-213ENST00000614496 TMEM140Q9NV12 185 aa10.52□□□□□ -0.72
MSH6-213ENST00000614496 MED13Q9UHV7 2174 aa10.52□□□□□ -0.72
MSH6-213ENST00000614496 HELTA6NFD8 242 aa10.52□□□□□ -0.73
MSH6-213ENST00000614496 GALR2O43603 387 aaPredicted RBP10.52□□□□□ -0.73
MSH6-213ENST00000614496 SPCS3P61009 180 aa10.52□□□□□ -0.73
MSH6-213ENST00000614496 RTL8BQ17RB0 113 aa10.52□□□□□ -0.73
MSH6-213ENST00000614496 Q6P435 159 aa10.52□□□□□ -0.73
MSH6-213ENST00000614496 DEFB123Q8N688 67 aa10.52□□□□□ -0.73
MSH6-213ENST00000614496 A0A1B0GUS0 222 aa10.52□□□□□ -0.73
MSH6-213ENST00000614496 CAMPP49913 170 aa10.52□□□□□ -0.73
MSH6-213ENST00000614496 Q6ZS49 121 aa10.52□□□□□ -0.73
MSH6-213ENST00000614496 LURAP1LQ8IV03 231 aa10.52□□□□□ -0.73
MSH6-213ENST00000614496 METRNQ9UJH8 293 aa10.52□□□□□ -0.73
MSH6-213ENST00000614496 RPL31P62899 125 aaKnown RBP10.51□□□□□ -0.73
MSH6-213ENST00000614496 NHLRC2Q8NBF2 726 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 MISP3Q96FF7 219 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 MRPL18Q9H0U6 180 aaKnown RBP10.51□□□□□ -0.73
MSH6-213ENST00000614496 MS4A5Q9H3V2 200 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms