RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 PGPEP1LA6NFU8 196 aa10.03□□□□□ -0.8
TP53-220ENST00000610623 SNURFLB1AK76 121 aa10.03□□□□□ -0.8
TP53-220ENST00000610623 BCL3P20749 454 aa10.03□□□□□ -0.8
TP53-220ENST00000610623 COX19Q49B96 90 aa10.03□□□□□ -0.8
TP53-220ENST00000610623 ZNF585BQ52M93 769 aa10.03□□□□□ -0.8
TP53-220ENST00000610623 KRTCAP3Q53RY4 240 aa10.03□□□□□ -0.8
TP53-220ENST00000610623 C1orf122Q6ZSJ8 110 aa10.03□□□□□ -0.8
TP53-220ENST00000610623 ZIC4Q8N9L1 334 aa10.03□□□□□ -0.8
TP53-220ENST00000610623 APOBEC3DQ96AK3 386 aaPredicted RBP10.03□□□□□ -0.8
TP53-220ENST00000610623 IMMP1LQ96LU5 166 aa10.03□□□□□ -0.8
TP53-220ENST00000610623 VPS25Q9BRG1 176 aa10.03□□□□□ -0.8
TP53-220ENST00000610623 SFXN3Q9BWM7 321 aa10.03□□□□□ -0.8
TP53-220ENST00000610623 CHTOPQ9Y3Y2 248 aaKnown RBP10.03□□□□□ -0.8
TP53-220ENST00000610623 SDK1Q7Z5N4 2213 aa10.03□□□□□ -0.8
TP53-220ENST00000610623 TRBV20OR9-2A0A075B6H5 130 aa10.02□□□□□ -0.8
TP53-220ENST00000610623 PMS2P5A8MQ11 134 aa10.02□□□□□ -0.8
TP53-220ENST00000610623 NPIPB11E5RHQ5 1161 aa10.02□□□□□ -0.8
TP53-220ENST00000610623 J3KRW8 73 aa10.02□□□□□ -0.8
TP53-220ENST00000610623 COX6A1P12074 109 aa10.02□□□□□ -0.8
TP53-220ENST00000610623 ACP1P24666 158 aa10.02□□□□□ -0.8
TP53-220ENST00000610623 PLA2G5P39877 138 aa10.02□□□□□ -0.8
TP53-220ENST00000610623 IER3P46695 156 aa10.02□□□□□ -0.8
TP53-220ENST00000610623 MLF1P58340 268 aa10.02□□□□□ -0.8
TP53-220ENST00000610623 RHOGP84095 191 aa10.02□□□□□ -0.8
TP53-220ENST00000610623 PSG4Q00888 419 aa10.02□□□□□ -0.8
TP53-220ENST00000610623 WDR73Q6P4I2 378 aa10.02□□□□□ -0.8
TP53-220ENST00000610623 OR2Y1Q8NGV0 311 aa10.02□□□□□ -0.8
TP53-220ENST00000610623 OCC1Q8TAD7 63 aa10.02□□□□□ -0.8
TP53-220ENST00000610623 AKIRIN1Q9H9L7 192 aaPredicted RBP10.02□□□□□ -0.8
TP53-220ENST00000610623 PRUNE2Q8WUY3 3088 aa10.02□□□□□ -0.8
TP53-220ENST00000610623 A0A1W2PS18 150 aa10.02□□□□□ -0.81
TP53-220ENST00000610623 S1PR2O95136 353 aa10.02□□□□□ -0.81
TP53-220ENST00000610623 IGLV2-14P01704 120 aa10.02□□□□□ -0.81
TP53-220ENST00000610623 DCAF12Q5T6F0 453 aa10.02□□□□□ -0.81
TP53-220ENST00000610623 MRPL27Q9P0M9 148 aaKnown RBP10.02□□□□□ -0.81
TP53-220ENST00000610623 LY96Q9Y6Y9 160 aa10.02□□□□□ -0.81
TP53-220ENST00000610623 IGLC7A0M8Q6 106 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 CBY3A6NI87 242 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.01□□□□□ -0.81
TP53-220ENST00000610623 ZNF324O75467 553 aaPredicted RBP10.01□□□□□ -0.81
TP53-220ENST00000610623 KLF7O75840 302 aaPredicted RBP10.01□□□□□ -0.81
TP53-220ENST00000610623 C3orf79P0CE67 100 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 CCL4P13236 92 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 FOLR3P41439 243 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 TFF3Q07654 80 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 RPEL1Q2QD12 228 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 LINC00596Q86U02 117 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 BATF2Q8N1L9 274 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 FGFRL1Q8N441 504 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 OR1L1Q8NH94 360 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 PPP1R35Q8TAP8 253 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 CSTL1Q9H114 145 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 CHCHD2Q9Y6H1 151 aaPredicted RBP10.01□□□□□ -0.81
TP53-220ENST00000610623 ARHGAP21Q5T5U3 1957 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 COL27A1Q8IZC6 1860 aaPredicted RBP10.01□□□□□ -0.81
TP53-220ENST00000610623 TRAV34A0A0B4J273 112 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 A0A1W2PR80 420 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 OR5A2Q8NGI9 324 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 SPSB4Q96A44 273 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 LOXL4Q96JB6 756 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 TMEM204Q9BSN7 226 aa10.01□□□□□ -0.81
TP53-220ENST00000610623 A0A1W2PPV4 95 aa10□□□□□ -0.81
TP53-220ENST00000610623 ZNF83P51522 516 aa10□□□□□ -0.81
TP53-220ENST00000610623 SSR4P51571 173 aa10□□□□□ -0.81
TP53-220ENST00000610623 HTD2P86397 168 aa10□□□□□ -0.81
TP53-220ENST00000610623 OCIAD2Q56VL3 154 aa10□□□□□ -0.81
TP53-220ENST00000610623 STUMQ69YW2 141 aa10□□□□□ -0.81
TP53-220ENST00000610623 Q6ZVH6 145 aa10□□□□□ -0.81
TP53-220ENST00000610623 BORCS7Q96B45 105 aa10□□□□□ -0.81
TP53-220ENST00000610623 SEPSECSQ9HD40 501 aaKnown RBP10□□□□□ -0.81
TP53-220ENST00000610623 PPP1R3CQ9UQK1 317 aa10□□□□□ -0.81
TP53-220ENST00000610623 OR5B21A6NL26 309 aa10□□□□□ -0.81
TP53-220ENST00000610623 HSPB6O14558 160 aa10□□□□□ -0.81
TP53-220ENST00000610623 ZNF32P17041 273 aa10□□□□□ -0.81
TP53-220ENST00000610623 VAMP3Q15836 100 aa10□□□□□ -0.81
TP53-220ENST00000610623 C20orf204Q6ZNR8 217 aa10□□□□□ -0.81
TP53-220ENST00000610623 MMD2Q8IY49 270 aa10□□□□□ -0.81
TP53-220ENST00000610623 MUC15Q8N387 334 aa10□□□□□ -0.81
TP53-220ENST00000610623 TMEM105Q8N8V8 129 aa10□□□□□ -0.81
TP53-220ENST00000610623 UHRF2Q96PU4 802 aa10□□□□□ -0.81
TP53-220ENST00000610623 CST9LQ9H4G1 147 aa10□□□□□ -0.81
TP53-220ENST00000610623 A0A1W2PRS3 328 aa9.99□□□□□ -0.81
TP53-220ENST00000610623 C9JCJ5 164 aa9.99□□□□□ -0.81
TP53-220ENST00000610623 TRAPPC2LH3BP13 241 aa9.99□□□□□ -0.81
TP53-220ENST00000610623 PMCHP20382 165 aa9.99□□□□□ -0.81
TP53-220ENST00000610623 THBS3P49746 956 aa9.99□□□□□ -0.81
TP53-220ENST00000610623 RHOBP62745 196 aa9.99□□□□□ -0.81
TP53-220ENST00000610623 LRRC10Q5BKY1 277 aa9.99□□□□□ -0.81
TP53-220ENST00000610623 NIT1Q86X76 327 aa9.99□□□□□ -0.81
TP53-220ENST00000610623 MKXQ8IYA7 352 aa9.99□□□□□ -0.81
TP53-220ENST00000610623 WNT10AQ9GZT5 417 aa9.99□□□□□ -0.81
TP53-220ENST00000610623 TMEM38BQ9NVV0 291 aa9.99□□□□□ -0.81
TP53-220ENST00000610623 NAT8BQ9UHF3 227 aa9.99□□□□□ -0.81
TP53-220ENST00000610623 M0QZ24 198 aa9.99□□□□□ -0.81
TP53-220ENST00000610623 SIRPB1O00241 398 aa9.99□□□□□ -0.81
TP53-220ENST00000610623 SLC17A3O00476 420 aa9.99□□□□□ -0.81
TP53-220ENST00000610623 CIDEAO60543 219 aa9.99□□□□□ -0.81
TP53-220ENST00000610623 SRD5A2P31213 254 aa9.99□□□□□ -0.81
TP53-220ENST00000610623 GABRA2P47869 451 aa9.99□□□□□ -0.81
TP53-220ENST00000610623 OR4F17Q8NGA8 305 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms