RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 HPCAP84074 193 aa0.32□□□□□ -2.36
HDDC2-207ENST00000608532 SMAGPQ0VAQ4 97 aa0.32□□□□□ -2.36
HDDC2-207ENST00000608532 CDK10Q15131 360 aa0.32□□□□□ -2.36
HDDC2-207ENST00000608532 SPATA24Q86W54 205 aa0.32□□□□□ -2.36
HDDC2-207ENST00000608532 ZNF565Q8N9K5 539 aa0.32□□□□□ -2.36
HDDC2-207ENST00000608532 ATP6V1C2Q8NEY4 427 aa0.32□□□□□ -2.36
HDDC2-207ENST00000608532 CYTH2Q99418 400 aa0.32□□□□□ -2.36
HDDC2-207ENST00000608532 MED10Q9BTT4 135 aa0.32□□□□□ -2.36
HDDC2-207ENST00000608532 CHST6Q9GZX3 395 aa0.32□□□□□ -2.36
HDDC2-207ENST00000608532 METTL9Q9H1A3 318 aa0.32□□□□□ -2.36
HDDC2-207ENST00000608532 ASCL3Q9NQ33 180 aa0.32□□□□□ -2.36
HDDC2-207ENST00000608532 ZNHIT6Q9NWK9 470 aaKnown RBP0.32□□□□□ -2.36
HDDC2-207ENST00000608532 SCAF11Q99590 1463 aaKnown RBP0.32□□□□□ -2.36
HDDC2-207ENST00000608532 CHD5Q8TDI0 1954 aa0.32□□□□□ -2.36
HDDC2-207ENST00000608532 TMEM269A0A1B0GVZ9 245 aa0.31□□□□□ -2.36
HDDC2-207ENST00000608532 DAPL1A0PJW8 107 aa0.31□□□□□ -2.36
HDDC2-207ENST00000608532 OR51F1A6NGY5 319 aa0.31□□□□□ -2.36
HDDC2-207ENST00000608532 IBA57-AS1B1ANH7 110 aa0.31□□□□□ -2.36
HDDC2-207ENST00000608532 C9JCJ5 164 aa0.31□□□□□ -2.36
HDDC2-207ENST00000608532 ATP5G1P05496 136 aa0.31□□□□□ -2.36
HDDC2-207ENST00000608532 TFPTP0C1Z6 253 aa0.31□□□□□ -2.36
HDDC2-207ENST00000608532 AKR1C1Q04828 323 aa0.31□□□□□ -2.36
HDDC2-207ENST00000608532 RBM48Q5RL73 367 aaKnown RBP0.31□□□□□ -2.36
HDDC2-207ENST00000608532 RASSF6Q6ZTQ3 369 aa0.31□□□□□ -2.36
HDDC2-207ENST00000608532 RPP25LQ8N5L8 163 aaKnown RBP0.31□□□□□ -2.36
HDDC2-207ENST00000608532 RAB2BQ8WUD1 216 aa0.31□□□□□ -2.36
HDDC2-207ENST00000608532 ACOT12Q8WYK0 555 aa0.31□□□□□ -2.36
HDDC2-207ENST00000608532 CD300AQ9UGN4 299 aa0.31□□□□□ -2.36
HDDC2-207ENST00000608532 PCYT1BQ9Y5K3 369 aaPredicted RBP0.31□□□□□ -2.36
HDDC2-207ENST00000608532 NUP160Q12769 1436 aa0.3□□□□□ -2.36
HDDC2-207ENST00000608532 ITGB1BP1O14713 200 aa0.3□□□□□ -2.36
HDDC2-207ENST00000608532 ATP8B1O43520 1251 aa0.3□□□□□ -2.36
HDDC2-207ENST00000608532 LINC00614P0C842 121 aa0.3□□□□□ -2.36
HDDC2-207ENST00000608532 GRPRP30550 384 aa0.3□□□□□ -2.36
HDDC2-207ENST00000608532 CLEC12BQ2HXU8 276 aa0.3□□□□□ -2.36
HDDC2-207ENST00000608532 FAM27BQ5VT28 67 aa0.3□□□□□ -2.36
HDDC2-207ENST00000608532 GPHB5Q86YW7 130 aa0.3□□□□□ -2.36
HDDC2-207ENST00000608532 OR8B3Q8NGG8 313 aa0.3□□□□□ -2.36
HDDC2-207ENST00000608532 SERPINI1Q99574 410 aa0.3□□□□□ -2.36
HDDC2-207ENST00000608532 TMEM109Q9BVC6 243 aa0.3□□□□□ -2.36
HDDC2-207ENST00000608532 MROQ9BYG7 248 aa0.3□□□□□ -2.36
HDDC2-207ENST00000608532 TRABDQ9H4I3 376 aa0.3□□□□□ -2.36
HDDC2-207ENST00000608532 GMEB1Q9Y692 573 aa0.3□□□□□ -2.36
HDDC2-207ENST00000608532 MAP3K19Q56UN5 1328 aa0.3□□□□□ -2.36
HDDC2-207ENST00000608532 ABCC12Q96J65 1359 aa0.3□□□□□ -2.36
HDDC2-207ENST00000608532 MDN1Q9NU22 5596 aa0.29□□□□□ -2.36
HDDC2-207ENST00000608532 TMEM212A6NML5 194 aa0.29□□□□□ -2.36
HDDC2-207ENST00000608532 SDCBPO00560 298 aaPredicted RBP0.29□□□□□ -2.36
HDDC2-207ENST00000608532 ADAP1O75689 374 aa0.29□□□□□ -2.36
HDDC2-207ENST00000608532 SYT1P21579 422 aa0.29□□□□□ -2.36
HDDC2-207ENST00000608532 MSNP26038 577 aaKnown RBP0.29□□□□□ -2.36
HDDC2-207ENST00000608532 SLCO1A2P46721 670 aa0.29□□□□□ -2.36
HDDC2-207ENST00000608532 ACSM3Q53FZ2 586 aa0.29□□□□□ -2.36
HDDC2-207ENST00000608532 TEX36Q5VZQ5 186 aa0.29□□□□□ -2.36
HDDC2-207ENST00000608532 CNPY4Q8N129 248 aa0.29□□□□□ -2.36
HDDC2-207ENST00000608532 C12orf29Q8N999 325 aa0.29□□□□□ -2.36
HDDC2-207ENST00000608532 STOML3Q8TAV4 291 aa0.29□□□□□ -2.36
HDDC2-207ENST00000608532 THSD7AQ9UPZ6 1657 aa0.29□□□□□ -2.36
HDDC2-207ENST00000608532 TRBV6-7A0A0A0MS04 114 aa0.28□□□□□ -2.36
HDDC2-207ENST00000608532 TRAV14DV4A0A0A6YYC5 116 aa0.28□□□□□ -2.36
HDDC2-207ENST00000608532 TRAPPC2LH3BP13 241 aa0.28□□□□□ -2.36
HDDC2-207ENST00000608532 FKBP1AP62942 108 aaKnown RBP0.28□□□□□ -2.36
HDDC2-207ENST00000608532 FABP5Q01469 135 aa0.28□□□□□ -2.36
HDDC2-207ENST00000608532 SYCP1Q15431 976 aa0.28□□□□□ -2.36
HDDC2-207ENST00000608532 BLIDQ8IZY5 108 aa0.28□□□□□ -2.36
HDDC2-207ENST00000608532 PPCDCQ96CD2 204 aa0.28□□□□□ -2.36
HDDC2-207ENST00000608532 TMEM94Q12767 1356 aa0.28□□□□□ -2.36
HDDC2-207ENST00000608532 TONSLQ96HA7 1378 aa0.28□□□□□ -2.36
HDDC2-207ENST00000608532 TMED7-TICAM2A0A0A6YYA0 188 aa0.27□□□□□ -2.37
HDDC2-207ENST00000608532 APOA1P02647 267 aa0.27□□□□□ -2.37
HDDC2-207ENST00000608532 CXCL2P19875 107 aa0.27□□□□□ -2.37
HDDC2-207ENST00000608532 SAPCD1Q5SSQ6 148 aa0.27□□□□□ -2.37
HDDC2-207ENST00000608532 OR52E4Q8NGH9 312 aa0.27□□□□□ -2.37
HDDC2-207ENST00000608532 OR10D3Q8NH80 312 aa0.27□□□□□ -2.37
HDDC2-207ENST00000608532 LHFPL6Q9Y693 200 aa0.27□□□□□ -2.37
HDDC2-207ENST00000608532 NUP153P49790 1475 aaKnown RBP0.27□□□□□ -2.37
HDDC2-207ENST00000608532 USP24Q9UPU5 2620 aa0.27□□□□□ -2.37
HDDC2-207ENST00000608532 SIPA1L1O43166 1804 aa0.27□□□□□ -2.37
HDDC2-207ENST00000608532 RNASE3P12724 160 aaKnown RBP0.26□□□□□ -2.37
HDDC2-207ENST00000608532 CXCL3P19876 107 aa0.26□□□□□ -2.37
HDDC2-207ENST00000608532 KCNJ3P48549 501 aa0.26□□□□□ -2.37
HDDC2-207ENST00000608532 RPL30P62888 115 aaKnown RBP0.26□□□□□ -2.37
HDDC2-207ENST00000608532 DNAL1Q4LDG9 190 aa0.26□□□□□ -2.37
HDDC2-207ENST00000608532 FBXO48Q5FWF7 155 aa0.26□□□□□ -2.37
HDDC2-207ENST00000608532 SPERTQ8NA61 448 aa0.26□□□□□ -2.37
HDDC2-207ENST00000608532 OBSCN-AS1Q96MR7 158 aa0.26□□□□□ -2.37
HDDC2-207ENST00000608532 TIMM22Q9Y584 194 aa0.26□□□□□ -2.37
HDDC2-207ENST00000608532 KIF24Q5T7B8 1368 aa0.26□□□□□ -2.37
HDDC2-207ENST00000608532 GLI3P10071 1580 aa0.26□□□□□ -2.37
HDDC2-207ENST00000608532 SMARCA4P51532 1647 aa0.26□□□□□ -2.37
HDDC2-207ENST00000608532 EIF4G1Q04637 1599 aaKnown RBP0.25□□□□□ -2.37
HDDC2-207ENST00000608532 SYNRGQ9UMZ2 1314 aa0.25□□□□□ -2.37
HDDC2-207ENST00000608532 GOLGA8QA0A0J9YX86 632 aa0.25□□□□□ -2.37
HDDC2-207ENST00000608532 AZIN1O14977 448 aa0.25□□□□□ -2.37
HDDC2-207ENST00000608532 HAAOP46952 286 aa0.25□□□□□ -2.37
HDDC2-207ENST00000608532 NDUFA5Q16718 116 aa0.25□□□□□ -2.37
HDDC2-207ENST00000608532 DHFR2Q86XF0 187 aa0.25□□□□□ -2.37
HDDC2-207ENST00000608532 SBSPONQ8IVN8 264 aa0.25□□□□□ -2.37
HDDC2-207ENST00000608532 ZNF676Q8N7Q3 588 aa0.25□□□□□ -2.37
HDDC2-207ENST00000608532 OR5B17Q8NGF7 314 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms