RNA–Protein interactions for RNA: ENST00000605166.1

HMGB1P51-201, Transcript of high mobility group box 1 pseudogene 51, humanhuman

BASIC

Gene HMGB1P51, Length 638 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P51-201ENST00000605166 TMEM222Q9H0R3 208 aa2.9□□□□□ -1.95
HMGB1P51-201ENST00000605166 MCTS1Q9ULC4 181 aaKnown RBP2.9□□□□□ -1.95
HMGB1P51-201ENST00000605166 CHD5Q8TDI0 1954 aa2.9□□□□□ -1.95
HMGB1P51-201ENST00000605166 TRPM3Q9HCF6 1732 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P51-201ENST00000605166 GRIN2BQ13224 1484 aa2.9□□□□□ -1.95
HMGB1P51-201ENST00000605166 DICER1Q9UPY3 1922 aaKnown RBP2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 IGKV1D-17A0A075B6S4 117 aa2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 A0A087WUJ7 227 aa2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 A0A087WUU8 490 aa2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 A0A1W2PNN7 141 aa2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 LST1O00453 97 aa2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 UBFD1O14562 309 aaKnown RBP2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 HAND1O96004 215 aa2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 SOD1P00441 154 aa2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 HIST1H1TP22492 207 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 TNFAIP8L3Q5GJ75 292 aa2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 GLT6D1Q7Z4J2 308 aa2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 SPATA12Q7Z6I5 190 aa2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 C20orf196Q8IYI0 205 aa2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 LINC00304Q8N9R0 145 aa2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 ROPN1LQ96C74 230 aa2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 TVP23CQ96ET8 276 aa2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 CAPZA3Q96KX2 299 aa2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 PPP1R2P1Q96PQ5 205 aa2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 ARL2BPQ9Y2Y0 163 aa2.89□□□□□ -1.95
HMGB1P51-201ENST00000605166 PRR14LQ5THK1 2151 aa2.88□□□□□ -1.95
HMGB1P51-201ENST00000605166 NCOA1Q15788 1441 aa2.88□□□□□ -1.95
HMGB1P51-201ENST00000605166 OR5K4A6NMS3 321 aa2.88□□□□□ -1.95
HMGB1P51-201ENST00000605166 A8MUN3 132 aa2.88□□□□□ -1.95
HMGB1P51-201ENST00000605166 IGHV1-69P01742 117 aa2.88□□□□□ -1.95
HMGB1P51-201ENST00000605166 CD200P41217 278 aa2.88□□□□□ -1.95
HMGB1P51-201ENST00000605166 RPL27AP46776 148 aaKnown RBP2.88□□□□□ -1.95
HMGB1P51-201ENST00000605166 GABRA2P47869 451 aa2.88□□□□□ -1.95
HMGB1P51-201ENST00000605166 RBM11P57052 281 aaKnown RBP2.88□□□□□ -1.95
HMGB1P51-201ENST00000605166 RWDD2BP57060 319 aa2.88□□□□□ -1.95
HMGB1P51-201ENST00000605166 MSRB3Q8IXL7 192 aa2.88□□□□□ -1.95
HMGB1P51-201ENST00000605166 CNEP1R1Q8N9A8 125 aa2.88□□□□□ -1.95
HMGB1P51-201ENST00000605166 DGCR14Q96DF8 476 aaKnown RBP2.88□□□□□ -1.95
HMGB1P51-201ENST00000605166 DCSTAMPQ9H295 470 aa2.88□□□□□ -1.95
HMGB1P51-201ENST00000605166 MRPL16Q9NX20 251 aaKnown RBP2.88□□□□□ -1.95
HMGB1P51-201ENST00000605166 MRPL27Q9P0M9 148 aaKnown RBP2.88□□□□□ -1.95
HMGB1P51-201ENST00000605166 PRELID1Q9Y255 219 aa2.88□□□□□ -1.95
HMGB1P51-201ENST00000605166 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
HMGB1P51-201ENST00000605166 SEC16AO15027 2179 aa2.88□□□□□ -1.95
HMGB1P51-201ENST00000605166 A0A1W2PNM2 257 aa2.87□□□□□ -1.95
HMGB1P51-201ENST00000605166 TTRP02766 147 aa2.87□□□□□ -1.95
HMGB1P51-201ENST00000605166 KCNE1P15382 129 aa2.87□□□□□ -1.95
HMGB1P51-201ENST00000605166 TAS2R30P59541 319 aa2.87□□□□□ -1.95
HMGB1P51-201ENST00000605166 POLR2GP62487 172 aaKnown RBP eCLIP2.87□□□□□ -1.95
HMGB1P51-201ENST00000605166 GNA12Q03113 381 aa2.87□□□□□ -1.95
HMGB1P51-201ENST00000605166 PACRGLQ8N7B6 248 aa2.87□□□□□ -1.95
HMGB1P51-201ENST00000605166 NMNAT3Q96T66 252 aa2.87□□□□□ -1.95
HMGB1P51-201ENST00000605166 KRTAP4-3Q9BYR4 195 aa2.87□□□□□ -1.95
HMGB1P51-201ENST00000605166 TXNL4BQ9NX01 149 aaKnown RBP2.87□□□□□ -1.95
HMGB1P51-201ENST00000605166 PKIGQ9Y2B9 76 aa2.87□□□□□ -1.95
HMGB1P51-201ENST00000605166 HSPE1-MOB4S4R3N1 261 aa2.87□□□□□ -1.95
HMGB1P51-201ENST00000605166 ABCC12Q96J65 1359 aa2.87□□□□□ -1.95
HMGB1P51-201ENST00000605166 NOTCH2Q04721 2471 aa2.86□□□□□ -1.95
HMGB1P51-201ENST00000605166 WRNQ14191 1432 aaPredicted RBP eCLIP2.86□□□□□ -1.95
HMGB1P51-201ENST00000605166 NLRC5Q86WI3 1866 aa2.86□□□□□ -1.95
HMGB1P51-201ENST00000605166 KNCNA6PVL3 124 aa2.86□□□□□ -1.95
HMGB1P51-201ENST00000605166 PLA2G10O15496 165 aa2.86□□□□□ -1.95
HMGB1P51-201ENST00000605166 SERPINA1P01009 418 aa2.86□□□□□ -1.95
HMGB1P51-201ENST00000605166 GZMBP10144 247 aa2.86□□□□□ -1.95
HMGB1P51-201ENST00000605166 CPMP14384 443 aa2.86□□□□□ -1.95
HMGB1P51-201ENST00000605166 HIST1H3AP68431 136 aa2.86□□□□□ -1.95
HMGB1P51-201ENST00000605166 H3F3AP84243 136 aa2.86□□□□□ -1.95
HMGB1P51-201ENST00000605166 LPCAT3Q6P1A2 487 aa2.86□□□□□ -1.95
HMGB1P51-201ENST00000605166 OR13C8Q8NGS7 320 aa2.86□□□□□ -1.95
HMGB1P51-201ENST00000605166 BORCS7Q96B45 105 aa2.86□□□□□ -1.95
HMGB1P51-201ENST00000605166 ULBP3Q9BZM4 244 aa2.86□□□□□ -1.95
HMGB1P51-201ENST00000605166 TRIM4Q9C037 500 aa2.86□□□□□ -1.95
HMGB1P51-201ENST00000605166 CMTM6Q9NX76 183 aa2.86□□□□□ -1.95
HMGB1P51-201ENST00000605166 PRELID3BQ9Y3B1 194 aa2.86□□□□□ -1.95
HMGB1P51-201ENST00000605166 SHANK3Q9BYB0 1731 aa2.85□□□□□ -1.95
HMGB1P51-201ENST00000605166 IGHV3-15A0A0B4J1V0 119 aa2.85□□□□□ -1.95
HMGB1P51-201ENST00000605166 G3V3Q6 166 aa2.85□□□□□ -1.95
HMGB1P51-201ENST00000605166 H3BPC8 53 aa2.85□□□□□ -1.95
HMGB1P51-201ENST00000605166 CNIH1O95406 144 aa2.85□□□□□ -1.95
HMGB1P51-201ENST00000605166 TAS2R20P59543 309 aa2.85□□□□□ -1.95
HMGB1P51-201ENST00000605166 PSG4Q00888 419 aa2.85□□□□□ -1.95
HMGB1P51-201ENST00000605166 CDK10Q15131 360 aa2.85□□□□□ -1.95
HMGB1P51-201ENST00000605166 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P51-201ENST00000605166 GLT8D1Q68CQ7 371 aa2.85□□□□□ -1.95
HMGB1P51-201ENST00000605166 OR6V1Q8N148 313 aa2.85□□□□□ -1.95
HMGB1P51-201ENST00000605166 CLDND2Q8NHS1 167 aa2.85□□□□□ -1.95
HMGB1P51-201ENST00000605166 AICDAQ9GZX7 198 aa2.85□□□□□ -1.95
HMGB1P51-201ENST00000605166 DOK5Q9P104 306 aa2.85□□□□□ -1.95
HMGB1P51-201ENST00000605166 ZNF391Q9UJN7 358 aa2.85□□□□□ -1.95
HMGB1P51-201ENST00000605166 MTUS2Q5JR59 1369 aa2.85□□□□□ -1.95
HMGB1P51-201ENST00000605166 CCDC144AA2RUR9 1427 aa2.85□□□□□ -1.95
HMGB1P51-201ENST00000605166 ZNF638Q14966 1978 aaKnown RBP2.84□□□□□ -1.95
HMGB1P51-201ENST00000605166 IGLV10-54A0A075B6I4 117 aa2.84□□□□□ -1.95
HMGB1P51-201ENST00000605166 NOS1APO75052 506 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P51-201ENST00000605166 NPYP01303 97 aa2.84□□□□□ -1.95
HMGB1P51-201ENST00000605166 HLA-DRB1P01911 266 aa2.84□□□□□ -1.95
HMGB1P51-201ENST00000605166 SNRPD2P62316 118 aaKnown RBP2.84□□□□□ -1.95
HMGB1P51-201ENST00000605166 GUK1Q16774 197 aa2.84□□□□□ -1.95
HMGB1P51-201ENST00000605166 SMARCD3Q6STE5 483 aa2.84□□□□□ -1.95
HMGB1P51-201ENST00000605166 TMPPEQ6ZT21 453 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms