RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 NUBP1P53384 320 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 LIMS2Q7Z4I7 341 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 ZNF519Q8TB69 540 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 ZNF257Q9Y2Q1 563 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 ESDP10768 282 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 HIST3H2BBQ8N257 126 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 COX14Q96I36 57 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 RNF122Q9H9V4 155 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 RAC3P60763 192 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 HOXA4Q00056 320 aaPredicted RBP7.53□□□□□ -1.2
CSMD1-216ENST00000602557 AQP10Q96PS8 301 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 DIRC2Q96SL1 478 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 A8MWL6 223 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 LHX8Q68G74 356 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 GTF3AQ92664 365 aaKnown RBP7.53□□□□□ -1.2
CSMD1-216ENST00000602557 HARBI1Q96MB7 349 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 PXMP4Q9Y6I8 212 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 COL9A1P20849 921 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 OR8G5Q8NG78 346 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 RASL10BQ96S79 203 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 MPC1Q9Y5U8 109 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 C1QCP02747 245 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 CHODLQ9H9P2 273 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 LHX9Q9NQ69 397 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 TMEM189A5PLL7 270 aa7.52□□□□□ -1.2
CSMD1-216ENST00000602557 BHLHA9Q7RTU4 235 aa7.52□□□□□ -1.2
CSMD1-216ENST00000602557 WNT16Q9UBV4 365 aa7.52□□□□□ -1.2
CSMD1-216ENST00000602557 CXorf66Q5JRM2 361 aaPredicted RBP7.52□□□□□ -1.2
CSMD1-216ENST00000602557 HIST1H2BLQ99880 126 aa7.52□□□□□ -1.2
CSMD1-216ENST00000602557 LINC00614P0C842 121 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 FOXA3P55318 350 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-216ENST00000602557 NANOS3P60323 173 aaKnown RBP7.52□□□□□ -1.21
CSMD1-216ENST00000602557 VWA8A3KMH1 1905 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 VSIG8P0DPA2 414 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 FCGR2BP31994 310 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-216ENST00000602557 GPR6P46095 362 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-216ENST00000602557 OR51B2Q9Y5P1 312 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 A0A1W2PPE3 182 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 PRNDQ9UKY0 176 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 TRAV12-3A0A0B4J271 114 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 GFRA1P56159 465 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 ZNF324BQ6AW86 544 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-216ENST00000602557 C2orf88Q9BSF0 95 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 LINC00470Q9BZP3 86 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 CHST5Q9GZS9 411 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 REG1BP48304 166 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 NHP2Q9NX24 153 aaKnown RBP7.52□□□□□ -1.21
CSMD1-216ENST00000602557 RABAC1Q9UI14 185 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 HLA-DQB1P01920 261 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 HOXC4P09017 264 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-216ENST00000602557 FTH1P19P0C7X4 201 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 TNFRSF14Q92956 283 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 TRPM7Q96QT4 1865 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 PPIAL4EA0A075B759 164 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 PPIAL4FP0DN26 164 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 TRIP6Q15654 476 aaKnown RBP7.52□□□□□ -1.21
CSMD1-216ENST00000602557 SLC25A30Q5SVS4 291 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 PPIAL4AQ9Y536 164 aa7.52□□□□□ -1.21
CSMD1-216ENST00000602557 MGAMO43451 1857 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 MED12LQ86YW9 2145 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 A0A0U1RQV5 110 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 H3BTX0 84 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 KIR3DL2P43630 455 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 C2orf83Q53S99 150 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 TCFL5Q9UL49 500 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 AMBPP02760 352 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 ZNF708P17019 499 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 RAB1CQ92928 201 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 TTC28Q96AY4 2481 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 EML2O95834 649 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 CCL3P10147 92 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 DRD3P35462 400 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 PERPQ96FX8 193 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 DOPEY1Q5JWR5 2465 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 CENPWQ5EE01 88 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 TMEM252Q8N6L7 170 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 RND1Q92730 232 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 LIPFP07098 398 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 SERF2P84101 59 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 ZIC1Q15915 447 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 C5orf66Q9H5L9 145 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 ODAMA1E959 279 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 POC1AQ8NBT0 407 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 MAP1LC3AQ9H492 121 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 IGHV1OR15-9A0A0B4J2B8 117 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 S1PR2O95136 353 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 LSM6P62312 80 aaKnown RBP7.51□□□□□ -1.21
CSMD1-216ENST00000602557 ZAR1Q86SH2 424 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 A0A1W2PPC1 479 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 C10orf35Q96D05 121 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 GPR35Q9HC97 309 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 FBLIM1Q8WUP2 373 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 NPDC1Q9NQX5 325 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-216ENST00000602557 RAXQ9Y2V3 346 aa7.51□□□□□ -1.21
CSMD1-216ENST00000602557 KIAA1549Q9HCM3 1950 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 TRBV9A0A0B4J1U6 114 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 NXPH1P58417 271 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 ASB5Q8WWX0 329 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 SLC25A28Q96A46 364 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 NDUFA3O95167 84 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms