RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 C8orf31Q8N9H6 132 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 INO80EQ8NBZ0 244 aaPredicted RBP8.17□□□□□ -1.1
UPF1-213ENST00000601981 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.17□□□□□ -1.1
UPF1-213ENST00000601981 OR10X1Q8NGY0 326 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 DCUN1D4Q92564 292 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 LSM10Q969L4 123 aaKnown RBP8.17□□□□□ -1.1
UPF1-213ENST00000601981 MALSU1Q96EH3 234 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 GPHA2Q96T91 129 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 HSD17B10Q99714 261 aaKnown RBP8.17□□□□□ -1.1
UPF1-213ENST00000601981 AGMATQ9BSE5 352 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 RNF126Q9BV68 326 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 ARL6Q9H0F7 186 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 SDHAF2Q9NX18 166 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 RNF150Q9ULK6 438 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 PSG11Q9UQ72 335 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 GAB2Q9UQC2 676 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 A0A0U1RQK1 487 aa8.16□□□□□ -1.1
UPF1-213ENST00000601981 J3QR06 171 aa8.16□□□□□ -1.1
UPF1-213ENST00000601981 DEDDO75618 318 aa8.16□□□□□ -1.1
UPF1-213ENST00000601981 RLN2P04090 185 aa8.16□□□□□ -1.1
UPF1-213ENST00000601981 NUP62P37198 522 aaPredicted RBP8.16□□□□□ -1.1
UPF1-213ENST00000601981 GPR12P47775 334 aa8.16□□□□□ -1.1
UPF1-213ENST00000601981 S100A10P60903 97 aa8.16□□□□□ -1.1
UPF1-213ENST00000601981 DEFB112Q30KQ8 113 aa8.16□□□□□ -1.1
UPF1-213ENST00000601981 THOC7Q6I9Y2 204 aaKnown RBP8.16□□□□□ -1.1
UPF1-213ENST00000601981 ZNF439Q8NDP4 499 aa8.16□□□□□ -1.1
UPF1-213ENST00000601981 OR4D5Q8NGN0 318 aa8.16□□□□□ -1.1
UPF1-213ENST00000601981 OR1S1Q8NH92 325 aa8.16□□□□□ -1.1
UPF1-213ENST00000601981 SSMEM1Q8WWF3 244 aa8.16□□□□□ -1.1
UPF1-213ENST00000601981 RPEQ96AT9 228 aa8.16□□□□□ -1.1
UPF1-213ENST00000601981 AQP10Q96PS8 301 aa8.16□□□□□ -1.1
UPF1-213ENST00000601981 ABHD14AQ9BUJ0 271 aa8.16□□□□□ -1.1
UPF1-213ENST00000601981 IFI27L2Q9H2X8 130 aa8.16□□□□□ -1.1
UPF1-213ENST00000601981 OR5AC2Q9NZP5 309 aa8.16□□□□□ -1.1
UPF1-213ENST00000601981 DPM3Q9P2X0 92 aa8.16□□□□□ -1.1
UPF1-213ENST00000601981 SVEP1Q4LDE5 3571 aa8.16□□□□□ -1.1
UPF1-213ENST00000601981 A0A1B0GU03 582 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 OOSP1A8MZH6 123 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 BUB1B-PAK6H3BSN5 160 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 K7EPK0 472 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 BCL2L11O43521 198 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 ATG12O94817 140 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 IFNA7P01567 189 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 IGKV1-39P01597 117 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 IGLV1-47P01700 117 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 MBPP02686 304 aaPredicted RBP8.15□□□□□ -1.1
UPF1-213ENST00000601981 IGKV1D-39P04432 117 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 BRS3P32247 399 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 HILS1P60008 231 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 RPL30P62888 115 aaKnown RBP8.15□□□□□ -1.1
UPF1-213ENST00000601981 AANATQ16613 207 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 NDUFA5Q16718 116 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 ZNF585BQ52M93 769 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 TEX261Q6UWH6 196 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 SLC51BQ86UW2 128 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 BCL6BQ8N143 479 aaPredicted RBP8.15□□□□□ -1.1
UPF1-213ENST00000601981 FAM71E2Q8N5Q1 922 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 LINC00311Q8N616 119 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 SIGLECL1Q8N7X8 197 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 OR8H1Q8NGG4 311 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 OR4P4Q8NGL7 312 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 OR5R1Q8NH85 324 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 CD300LFQ8TDQ1 290 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 TCTEX1D2Q8WW35 142 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 LEAP2Q969E1 77 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 ZNRD1Q9P1U0 126 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 POMT1Q9Y6A1 747 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 U3KQ87 197 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 JMJD1CQ15652 2540 aa8.15□□□□□ -1.1
UPF1-213ENST00000601981 KANTRA0A1W2PQU2 76 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 E5RGE8 158 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 TRIM77I1YAP6 450 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 ST8SIA3O43173 380 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 RBFOX2O43251 390 aaKnown RBP eCLIP8.14□□□□□ -1.11
UPF1-213ENST00000601981 TXNL1O43396 289 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 SCGB1D2O95969 90 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 IGHV3-7P01780 117 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 DUTP33316 252 aaKnown RBP8.14□□□□□ -1.11
UPF1-213ENST00000601981 KIR2DS2P43631 304 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 NKX2-1P43699 371 aaPredicted RBP8.14□□□□□ -1.11
UPF1-213ENST00000601981 UBA52P62987 128 aaKnown RBP8.14□□□□□ -1.11
UPF1-213ENST00000601981 SSX2Q16385 188 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 LRRC75BQ2VPJ9 315 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 CT45A1Q5HYN5 189 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 Q6YL49 198 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 SLC25A48Q6ZT89 311 aaKnown RBP8.14□□□□□ -1.11
UPF1-213ENST00000601981 LHFPL4Q7Z7J7 247 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 FAM219AQ8IW50 185 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 TMEM86BQ8N661 226 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 ZNF680Q8NEM1 530 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 CT45A3Q8NHU0 189 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 RNASE11Q8TAA1 199 aaKnown RBP8.14□□□□□ -1.11
UPF1-213ENST00000601981 RRNAD1Q96FB5 475 aaKnown RBP8.14□□□□□ -1.11
UPF1-213ENST00000601981 MEGF9Q9H1U4 602 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 PRDM13Q9H4Q3 707 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 PLEKHA2Q9HB19 425 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 NSG2Q9Y328 171 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 LSM5Q9Y4Y9 91 aaKnown RBP8.14□□□□□ -1.11
UPF1-213ENST00000601981 HILPDAQ9Y5L2 63 aa8.14□□□□□ -1.11
UPF1-213ENST00000601981 FBN1P35555 2871 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms