RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 TINAGL1Q9GZM7 467 aaPredicted RBP20.05■□□□□ 0.8
PNKP-216ENST00000601816 AUNIPQ9H7T9 357 aa20.05■□□□□ 0.8
PNKP-216ENST00000601816 RANGRFQ9HD47 186 aaPredicted RBP20.05■□□□□ 0.8
PNKP-216ENST00000601816 A0A087WXM4 84 aa20.04■□□□□ 0.8
PNKP-216ENST00000601816 AIREO43918 545 aa20.04■□□□□ 0.8
PNKP-216ENST00000601816 ACTL6BO94805 426 aa20.04■□□□□ 0.8
PNKP-216ENST00000601816 TSPAN14Q8NG11 270 aa20.04■□□□□ 0.8
PNKP-216ENST00000601816 TCTEX1D2Q8WW35 142 aa20.04■□□□□ 0.8
PNKP-216ENST00000601816 ZNF430Q9H8G1 570 aaPredicted RBP20.04■□□□□ 0.8
PNKP-216ENST00000601816 COL7A1Q02388 2944 aa20.03■□□□□ 0.8
PNKP-216ENST00000601816 MPPED1O15442 326 aa20.03■□□□□ 0.8
PNKP-216ENST00000601816 TNFAIP8O95379 198 aa20.03■□□□□ 0.8
PNKP-216ENST00000601816 ZP3P21754 424 aa20.03■□□□□ 0.8
PNKP-216ENST00000601816 TGFBR1P36897 503 aa20.03■□□□□ 0.8
PNKP-216ENST00000601816 MMD2Q8IY49 270 aa20.03■□□□□ 0.8
PNKP-216ENST00000601816 OR6Q1Q8NGQ2 317 aa20.03■□□□□ 0.8
PNKP-216ENST00000601816 OR4S2Q8NH73 311 aa20.03■□□□□ 0.8
PNKP-216ENST00000601816 YIPF6Q96EC8 236 aa20.03■□□□□ 0.8
PNKP-216ENST00000601816 OR4C12Q96R67 309 aa20.03■□□□□ 0.8
PNKP-216ENST00000601816 ANKRD34BA5PLL1 514 aa20.02■□□□□ 0.8
PNKP-216ENST00000601816 OR9G9P0C7N8 305 aa20.02■□□□□ 0.8
PNKP-216ENST00000601816 FCGR2CP31995 323 aa20.02■□□□□ 0.8
PNKP-216ENST00000601816 DEFA5Q01523 94 aa20.02■□□□□ 0.8
PNKP-216ENST00000601816 EIF4EBP1Q13541 118 aaPredicted RBP20.02■□□□□ 0.8
PNKP-216ENST00000601816 ADAD2Q8NCV1 583 aaKnown RBP20.02■□□□□ 0.8
PNKP-216ENST00000601816 TAS2R8Q9NYW2 309 aa20.02■□□□□ 0.8
PNKP-216ENST00000601816 NHLRC4P0CG21 123 aaPredicted RBP20.01■□□□□ 0.79
PNKP-216ENST00000601816 PTHLHP12272 177 aa20.01■□□□□ 0.79
PNKP-216ENST00000601816 ZNF66Q6ZN08 573 aa20.01■□□□□ 0.79
PNKP-216ENST00000601816 OR13F1Q8NGS4 319 aa20.01■□□□□ 0.79
PNKP-216ENST00000601816 SECTM1Q8WVN6 248 aa20.01■□□□□ 0.79
PNKP-216ENST00000601816 USMG5Q96IX5 58 aa20.01■□□□□ 0.79
PNKP-216ENST00000601816 SPIN2AQ99865 258 aa20.01■□□□□ 0.79
PNKP-216ENST00000601816 SPIN2BQ9BPZ2 258 aa20.01■□□□□ 0.79
PNKP-216ENST00000601816 ELOVL1Q9BW60 279 aa20.01■□□□□ 0.79
PNKP-216ENST00000601816 FCER2P06734 321 aa20■□□□□ 0.79
PNKP-216ENST00000601816 SPNP16150 400 aa20■□□□□ 0.79
PNKP-216ENST00000601816 CBX5P45973 191 aa20■□□□□ 0.79
PNKP-216ENST00000601816 LSM3P62310 102 aaKnown RBP20■□□□□ 0.79
PNKP-216ENST00000601816 DYRK1AQ13627 763 aa20■□□□□ 0.79
PNKP-216ENST00000601816 MSMO1Q15800 293 aa20■□□□□ 0.79
PNKP-216ENST00000601816 MFSD4AQ8N468 514 aa20■□□□□ 0.79
PNKP-216ENST00000601816 S100A16Q96FQ6 103 aaKnown RBP20■□□□□ 0.79
PNKP-216ENST00000601816 SMAD5-AS1Q9Y6J3 95 aa20■□□□□ 0.79
PNKP-216ENST00000601816 XRCC3O43542 346 aa19.99■□□□□ 0.79
PNKP-216ENST00000601816 PPYP01298 95 aa19.99■□□□□ 0.79
PNKP-216ENST00000601816 RPS19P39019 145 aaKnown RBP19.99■□□□□ 0.79
PNKP-216ENST00000601816 UBE2NLQ5JXB2 153 aa19.99■□□□□ 0.79
PNKP-216ENST00000601816 C10orf55Q5SWW7 151 aa19.99■□□□□ 0.79
PNKP-216ENST00000601816 ZNF343Q6P1L6 599 aa19.99■□□□□ 0.79
PNKP-216ENST00000601816 VKORC1L1Q8N0U8 176 aa19.99■□□□□ 0.79
PNKP-216ENST00000601816 VSTM2AQ8TAG5 236 aa19.99■□□□□ 0.79
PNKP-216ENST00000601816 CCL28Q9NRJ3 127 aa19.99■□□□□ 0.79
PNKP-216ENST00000601816 OR2A4O95047 310 aa19.98■□□□□ 0.79
PNKP-216ENST00000601816 KIR2DS2P43631 304 aa19.98■□□□□ 0.79
PNKP-216ENST00000601816 SNAPC3Q92966 411 aa19.98■□□□□ 0.79
PNKP-216ENST00000601816 OR2A7Q96R45 310 aa19.98■□□□□ 0.79
PNKP-216ENST00000601816 GPHA2Q96T91 129 aa19.98■□□□□ 0.79
PNKP-216ENST00000601816 PEF1Q9UBV8 284 aaKnown RBP19.98■□□□□ 0.79
PNKP-216ENST00000601816 TNFSF12O43508 249 aa19.97■□□□□ 0.79
PNKP-216ENST00000601816 KBTBD11O94819 623 aa19.97■□□□□ 0.79
PNKP-216ENST00000601816 GP9P14770 177 aa19.97■□□□□ 0.79
PNKP-216ENST00000601816 ZBTB34Q8NCN2 500 aa19.97■□□□□ 0.79
PNKP-216ENST00000601816 OR5AP2Q8NGF4 316 aa19.97■□□□□ 0.79
PNKP-216ENST00000601816 RSRP1Q9BUV0 290 aa19.97■□□□□ 0.79
PNKP-216ENST00000601816 SLC5A7Q9GZV3 580 aa19.97■□□□□ 0.79
PNKP-216ENST00000601816 IFT46Q9NQC8 304 aa19.97■□□□□ 0.79
PNKP-216ENST00000601816 TNCP24821 2201 aa19.96■□□□□ 0.79
PNKP-216ENST00000601816 MEIS3P1A6NDR6 274 aa19.96■□□□□ 0.79
PNKP-216ENST00000601816 FAM223BA6NKX1 122 aa19.96■□□□□ 0.79
PNKP-216ENST00000601816 RBMXL2O75526 392 aaKnown RBP19.96■□□□□ 0.79
PNKP-216ENST00000601816 BRWD1-AS2P59051 145 aa19.96■□□□□ 0.79
PNKP-216ENST00000601816 FXYD4P59646 89 aa19.96■□□□□ 0.79
PNKP-216ENST00000601816 RHOGP84095 191 aa19.96■□□□□ 0.79
PNKP-216ENST00000601816 KLF5Q13887 457 aaPredicted RBP19.96■□□□□ 0.79
PNKP-216ENST00000601816 FAM223AQ8IWN6 122 aa19.96■□□□□ 0.79
PNKP-216ENST00000601816 SAMD12Q8N8I0 201 aa19.96■□□□□ 0.79
PNKP-216ENST00000601816 TMEM167AQ8TBQ9 72 aa19.96■□□□□ 0.79
PNKP-216ENST00000601816 SORL1Q92673 2214 aa19.95■□□□□ 0.78
PNKP-216ENST00000601816 HRASP01112 189 aa19.95■□□□□ 0.78
PNKP-216ENST00000601816 TRBV12-3P01733 135 aa19.95■□□□□ 0.78
PNKP-216ENST00000601816 PRH1P02810 166 aa19.95■□□□□ 0.78
PNKP-216ENST00000601816 TMEM69Q5SWH9 247 aa19.95■□□□□ 0.78
PNKP-216ENST00000601816 SLC25A42Q86VD7 318 aa19.95■□□□□ 0.78
PNKP-216ENST00000601816 ANKRD13BQ86YJ7 626 aa19.95■□□□□ 0.78
PNKP-216ENST00000601816 PUSL1Q8N0Z8 303 aaKnown RBP19.95■□□□□ 0.78
PNKP-216ENST00000601816 ASCL2Q99929 193 aa19.95■□□□□ 0.78
PNKP-216ENST00000601816 AKIP1Q9NQ31 210 aa19.95■□□□□ 0.78
PNKP-216ENST00000601816 RPL27AP46776 148 aaKnown RBP19.94■□□□□ 0.78
PNKP-216ENST00000601816 SYNJ2BPP57105 145 aa19.94■□□□□ 0.78
PNKP-216ENST00000601816 TAS2R20P59543 309 aa19.94■□□□□ 0.78
PNKP-216ENST00000601816 HAPLN4Q86UW8 402 aa19.94■□□□□ 0.78
PNKP-216ENST00000601816 TTC9CQ8N5M4 171 aa19.94■□□□□ 0.78
PNKP-216ENST00000601816 OR9G4Q8NGQ1 327 aa19.94■□□□□ 0.78
PNKP-216ENST00000601816 GIMAP1Q8WWP7 306 aa19.94■□□□□ 0.78
PNKP-216ENST00000601816 WWC2-AS2Q96NR7 200 aa19.94■□□□□ 0.78
PNKP-216ENST00000601816 U3KQK5 164 aa19.94■□□□□ 0.78
PNKP-216ENST00000601816 MAS1LP35410 378 aa19.93■□□□□ 0.78
PNKP-216ENST00000601816 HERV-K104P61576 105 aa19.93■□□□□ 0.78
PNKP-216ENST00000601816 ZNF45Q02386 682 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms